RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 GNAI1P63096 354 aa10.8□□□□□ -0.68
PTPRA-204ENST00000380393 PTPRUQ92729 1446 aa10.8□□□□□ -0.68
PTPRA-204ENST00000380393 CCDC69A6NI79 296 aa10.79□□□□□ -0.68
PTPRA-204ENST00000380393 EFCAB8A8MWE9 144 aa10.79□□□□□ -0.68
PTPRA-204ENST00000380393 RAB27AP51159 221 aa10.79□□□□□ -0.68
PTPRA-204ENST00000380393 LONRF2Q1L5Z9 754 aa10.79□□□□□ -0.68
PTPRA-204ENST00000380393 HSP90AB4PQ58FF6 505 aa10.79□□□□□ -0.68
PTPRA-204ENST00000380393 MYSM1Q5VVJ2 828 aa10.79□□□□□ -0.68
PTPRA-204ENST00000380393 SPDYE1Q8NFV5 336 aaPredicted RBP10.79□□□□□ -0.68
PTPRA-204ENST00000380393 SAAL1Q96ER3 474 aa10.79□□□□□ -0.68
PTPRA-204ENST00000380393 CEP170BQ9Y4F5 1589 aaPredicted RBP10.79□□□□□ -0.68
PTPRA-204ENST00000380393 NRXN3Q9Y4C0 1643 aa10.79□□□□□ -0.68
PTPRA-204ENST00000380393 FIBPO43427 364 aa10.79□□□□□ -0.68
PTPRA-204ENST00000380393 PHACTR2O75167 634 aa10.79□□□□□ -0.68
PTPRA-204ENST00000380393 HOMER1Q86YM7 354 aa10.79□□□□□ -0.68
PTPRA-204ENST00000380393 SPDL1Q96EA4 605 aa10.79□□□□□ -0.68
PTPRA-204ENST00000380393 BLOC1S6Q9UL45 172 aa10.79□□□□□ -0.68
PTPRA-204ENST00000380393 HSP90B2PQ58FF3 399 aa10.79□□□□□ -0.68
PTPRA-204ENST00000380393 NCAPG2Q86XI2 1143 aa10.79□□□□□ -0.68
PTPRA-204ENST00000380393 GOLGA6CA6NDK9 693 aa10.78□□□□□ -0.68
PTPRA-204ENST00000380393 GOLGA6BA6NDN3 693 aa10.78□□□□□ -0.68
PTPRA-204ENST00000380393 EBAG9O00559 213 aa10.78□□□□□ -0.68
PTPRA-204ENST00000380393 URI1O94763 535 aaPredicted RBP10.78□□□□□ -0.68
PTPRA-204ENST00000380393 GOLGA6DP0CG33 693 aa10.78□□□□□ -0.68
PTPRA-204ENST00000380393 KIAA1328Q86T90 577 aa10.78□□□□□ -0.68
PTPRA-204ENST00000380393 MSL3Q8N5Y2 521 aaKnown RBP10.78□□□□□ -0.68
PTPRA-204ENST00000380393 CBX8Q9HC52 389 aa10.78□□□□□ -0.68
PTPRA-204ENST00000380393 GOLGA6AQ9NYA3 693 aa10.78□□□□□ -0.68
PTPRA-204ENST00000380393 DNAI1Q9UI46 699 aa10.78□□□□□ -0.68
PTPRA-204ENST00000380393 MRFAP1Q9Y605 127 aa10.78□□□□□ -0.68
PTPRA-204ENST00000380393 SETD1BQ9UPS6 1966 aaKnown RBP10.78□□□□□ -0.68
PTPRA-204ENST00000380393 CHMLP26374 656 aa10.78□□□□□ -0.68
PTPRA-204ENST00000380393 CD151P48509 253 aa10.78□□□□□ -0.68
PTPRA-204ENST00000380393 AMOTQ4VCS5 1084 aa10.78□□□□□ -0.68
PTPRA-204ENST00000380393 DDX46Q7L014 1031 aaKnown RBP10.78□□□□□ -0.68
PTPRA-204ENST00000380393 CEP57Q86XR8 500 aa10.78□□□□□ -0.68
PTPRA-204ENST00000380393 IRX2Q9BZI1 471 aaPredicted RBP10.78□□□□□ -0.68
PTPRA-204ENST00000380393 TMEM165Q9HC07 324 aa10.78□□□□□ -0.68
PTPRA-204ENST00000380393 CABP1Q9NZU7 370 aa10.78□□□□□ -0.68
PTPRA-204ENST00000380393 IL16Q14005 1332 aa10.78□□□□□ -0.68
PTPRA-204ENST00000380393 WDR33Q9C0J8 1336 aaKnown RBP10.78□□□□□ -0.68
PTPRA-204ENST00000380393 MYO1FO00160 1098 aa10.78□□□□□ -0.68
PTPRA-204ENST00000380393 N4BP1O75113 896 aaKnown RBP10.78□□□□□ -0.68
PTPRA-204ENST00000380393 RANBP1P43487 201 aa10.78□□□□□ -0.68
PTPRA-204ENST00000380393 USP4Q13107 963 aa10.78□□□□□ -0.68
PTPRA-204ENST00000380393 GPR161Q8N6U8 529 aaKnown RBP10.78□□□□□ -0.68
PTPRA-204ENST00000380393 TMEM87AQ8NBN3 555 aa10.78□□□□□ -0.68
PTPRA-204ENST00000380393 PLEKHG1Q9ULL1 1385 aa10.78□□□□□ -0.68
PTPRA-204ENST00000380393 PYGBP11216 843 aa10.77□□□□□ -0.68
PTPRA-204ENST00000380393 CCT5P48643 541 aa10.77□□□□□ -0.68
PTPRA-204ENST00000380393 TYRO3Q06418 890 aa10.77□□□□□ -0.68
PTPRA-204ENST00000380393 CCDC102AQ96A19 550 aa10.77□□□□□ -0.68
PTPRA-204ENST00000380393 CLIC6Q96NY7 704 aa10.77□□□□□ -0.68
PTPRA-204ENST00000380393 ZBTB40Q9NUA8 1239 aa10.77□□□□□ -0.68
PTPRA-204ENST00000380393 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.77□□□□□ -0.68
PTPRA-204ENST00000380393 ACTN3Q08043 901 aaPredicted RBP10.77□□□□□ -0.69
PTPRA-204ENST00000380393 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.77□□□□□ -0.69
PTPRA-204ENST00000380393 TBC1D2BQ9UPU7 963 aa10.77□□□□□ -0.69
PTPRA-204ENST00000380393 FBLN1P23142 703 aa10.77□□□□□ -0.69
PTPRA-204ENST00000380393 NEK4P51957 841 aa10.77□□□□□ -0.69
PTPRA-204ENST00000380393 CCZ1BP86790 482 aa10.77□□□□□ -0.69
PTPRA-204ENST00000380393 CCZ1P86791 482 aaPredicted RBP10.77□□□□□ -0.69
PTPRA-204ENST00000380393 ANO6Q4KMQ2 910 aa10.77□□□□□ -0.69
PTPRA-204ENST00000380393 ATL2Q8NHH9 583 aa10.77□□□□□ -0.69
PTPRA-204ENST00000380393 PARD6BQ9BYG5 372 aa10.77□□□□□ -0.69
PTPRA-204ENST00000380393 EVC2Q86UK5 1308 aa10.77□□□□□ -0.69
PTPRA-204ENST00000380393 IMPDH2P12268 514 aa10.76□□□□□ -0.69
PTPRA-204ENST00000380393 STK31Q9BXU1 1019 aa10.76□□□□□ -0.69
PTPRA-204ENST00000380393 CENPHQ9H3R5 247 aa10.76□□□□□ -0.69
PTPRA-204ENST00000380393 KIAA1210Q9ULL0 1709 aa10.76□□□□□ -0.69
PTPRA-204ENST00000380393 PES1O00541 588 aaKnown RBP10.76□□□□□ -0.69
PTPRA-204ENST00000380393 KCNB1Q14721 858 aa10.76□□□□□ -0.69
PTPRA-204ENST00000380393 SRCIN1Q9C0H9 1055 aa10.76□□□□□ -0.69
PTPRA-204ENST00000380393 MYO6Q9UM54 1294 aa10.76□□□□□ -0.69
PTPRA-204ENST00000380393 LAMC1P11047 1609 aa10.76□□□□□ -0.69
PTPRA-204ENST00000380393 SETBP1Q9Y6X0 1596 aa10.76□□□□□ -0.69
PTPRA-204ENST00000380393 RBM47A0AV96 593 aaKnown RBP10.76□□□□□ -0.69
PTPRA-204ENST00000380393 MAP2K7O14733 419 aa10.76□□□□□ -0.69
PTPRA-204ENST00000380393 GBP2P32456 591 aaPredicted RBP10.76□□□□□ -0.69
PTPRA-204ENST00000380393 MAP3K11Q16584 847 aa10.76□□□□□ -0.69
PTPRA-204ENST00000380393 MKL1Q969V6 931 aa10.76□□□□□ -0.69
PTPRA-204ENST00000380393 PPP1R13BQ96KQ4 1090 aa10.76□□□□□ -0.69
PTPRA-204ENST00000380393 THUMPD2Q9BTF0 503 aaKnown RBP10.76□□□□□ -0.69
PTPRA-204ENST00000380393 FAM204AQ9H8W3 233 aa10.76□□□□□ -0.69
PTPRA-204ENST00000380393 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.76□□□□□ -0.69
PTPRA-204ENST00000380393 TPP2P29144 1249 aaPredicted RBP10.75□□□□□ -0.69
PTPRA-204ENST00000380393 LAMB3Q13751 1172 aa10.75□□□□□ -0.69
PTPRA-204ENST00000380393 CEP85LQ5SZL2 805 aa10.75□□□□□ -0.69
PTPRA-204ENST00000380393 WLSQ5T9L3 541 aa10.75□□□□□ -0.69
PTPRA-204ENST00000380393 HDGFL1Q5TGJ6 251 aa10.75□□□□□ -0.69
PTPRA-204ENST00000380393 EZH1Q92800 747 aaPredicted RBP10.75□□□□□ -0.69
PTPRA-204ENST00000380393 ARHGAP23Q9P227 1491 aa10.75□□□□□ -0.69
PTPRA-204ENST00000380393 CAMK4Q16566 473 aa10.75□□□□□ -0.69
PTPRA-204ENST00000380393 LRRFIP1Q32MZ4 808 aaKnown RBP10.75□□□□□ -0.69
PTPRA-204ENST00000380393 C16orf71Q8IYS4 520 aaPredicted RBP10.75□□□□□ -0.69
PTPRA-204ENST00000380393 TBX22Q9Y458 520 aa10.75□□□□□ -0.69
PTPRA-204ENST00000380393 QRICH2Q9H0J4 1663 aa10.75□□□□□ -0.69
PTPRA-204ENST00000380393 FCHSD2O94868 740 aa10.75□□□□□ -0.69
PTPRA-204ENST00000380393 SPATA21Q7Z572 469 aa10.75□□□□□ -0.69
PTPRA-204ENST00000380393 B4GALNT2Q8NHY0 566 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms