RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 PLEKHF1Q96S99 279 aa12.5□□□□□ -0.41
USP6NL-202ENST00000379237 OSBPL5Q9H0X9 879 aaPredicted RBP12.5□□□□□ -0.41
USP6NL-202ENST00000379237 OSBPL3Q9H4L5 887 aa12.5□□□□□ -0.41
USP6NL-202ENST00000379237 PPARDQ03181 441 aa12.5□□□□□ -0.41
USP6NL-202ENST00000379237 PSME1Q06323 249 aa12.5□□□□□ -0.41
USP6NL-202ENST00000379237 G3BP1Q13283 466 aaKnown RBP eCLIP12.5□□□□□ -0.41
USP6NL-202ENST00000379237 DPCR1Q3MIW9 517 aa12.5□□□□□ -0.41
USP6NL-202ENST00000379237 REXO1L1PQ8IX06 675 aa12.5□□□□□ -0.41
USP6NL-202ENST00000379237 CEP120Q8N960 986 aa12.5□□□□□ -0.41
USP6NL-202ENST00000379237 RHPN1Q8TCX5 695 aa12.5□□□□□ -0.41
USP6NL-202ENST00000379237 PCMTD1Q96MG8 357 aaPredicted RBP12.5□□□□□ -0.41
USP6NL-202ENST00000379237 CHUKO15111 745 aa12.5□□□□□ -0.41
USP6NL-202ENST00000379237 MATR3P43243 847 aaKnown RBP eCLIP12.5□□□□□ -0.41
USP6NL-202ENST00000379237 NAP1L1P55209 391 aaKnown RBP12.5□□□□□ -0.41
USP6NL-202ENST00000379237 MYL5Q02045 173 aa12.5□□□□□ -0.41
USP6NL-202ENST00000379237 TEFQ10587 303 aa12.5□□□□□ -0.41
USP6NL-202ENST00000379237 AACSQ86V21 672 aa12.5□□□□□ -0.41
USP6NL-202ENST00000379237 SUGCTQ9HAC7 445 aa12.5□□□□□ -0.41
USP6NL-202ENST00000379237 GOLGA6BA6NDN3 693 aa12.49□□□□□ -0.41
USP6NL-202ENST00000379237 ACTN3Q08043 901 aaPredicted RBP12.49□□□□□ -0.41
USP6NL-202ENST00000379237 NAIF1Q69YI7 327 aaPredicted RBP12.49□□□□□ -0.41
USP6NL-202ENST00000379237 PGBD1Q96JS3 809 aa12.49□□□□□ -0.41
USP6NL-202ENST00000379237 KRT32Q14532 448 aa12.49□□□□□ -0.41
USP6NL-202ENST00000379237 SULT6B1Q6IMI4 303 aa12.49□□□□□ -0.41
USP6NL-202ENST00000379237 JMYQ8N9B5 988 aa12.49□□□□□ -0.41
USP6NL-202ENST00000379237 COG3Q96JB2 828 aa12.49□□□□□ -0.41
USP6NL-202ENST00000379237 RPGRIP1LQ68CZ1 1315 aa12.49□□□□□ -0.41
USP6NL-202ENST00000379237 EIF4G3O43432 1585 aaKnown RBP12.49□□□□□ -0.41
USP6NL-202ENST00000379237 CCDC181Q5TID7 509 aa12.49□□□□□ -0.41
USP6NL-202ENST00000379237 SAMD1Q6SPF0 538 aaPredicted RBP12.49□□□□□ -0.41
USP6NL-202ENST00000379237 IQCA1Q86XH1 822 aa12.49□□□□□ -0.41
USP6NL-202ENST00000379237 WDR24Q96S15 920 aa12.49□□□□□ -0.41
USP6NL-202ENST00000379237 IQCEQ6IPM2 695 aa12.49□□□□□ -0.41
USP6NL-202ENST00000379237 PNMA6EA0A0J9YXQ4 647 aa12.48□□□□□ -0.41
USP6NL-202ENST00000379237 OPA1O60313 960 aa12.48□□□□□ -0.41
USP6NL-202ENST00000379237 KIF4AO95239 1232 aa12.48□□□□□ -0.41
USP6NL-202ENST00000379237 ATP8B2P98198 1209 aa12.48□□□□□ -0.41
USP6NL-202ENST00000379237 FKBP15Q5T1M5 1219 aa12.48□□□□□ -0.41
USP6NL-202ENST00000379237 CYB5RLQ6IPT4 315 aa12.48□□□□□ -0.41
USP6NL-202ENST00000379237 MICAL1Q8TDZ2 1067 aa12.48□□□□□ -0.41
USP6NL-202ENST00000379237 DACH1Q9UI36 760 aa12.48□□□□□ -0.41
USP6NL-202ENST00000379237 AKAP2Q9Y2D5 859 aa12.48□□□□□ -0.41
USP6NL-202ENST00000379237 PARP3Q9Y6F1 533 aa12.48□□□□□ -0.41
USP6NL-202ENST00000379237 TRPM1Q7Z4N2 1603 aa12.48□□□□□ -0.41
USP6NL-202ENST00000379237 HSF2BPO75031 334 aa12.48□□□□□ -0.41
USP6NL-202ENST00000379237 RBBP5Q15291 538 aaKnown RBP12.48□□□□□ -0.41
USP6NL-202ENST00000379237 PPP1R42Q7Z4L9 355 aa12.48□□□□□ -0.41
USP6NL-202ENST00000379237 NUP133Q8WUM0 1156 aa12.48□□□□□ -0.41
USP6NL-202ENST00000379237 PAIP2Q9BPZ3 127 aaKnown RBP12.48□□□□□ -0.41
USP6NL-202ENST00000379237 FTOQ9C0B1 505 aaKnown RBP eCLIP12.48□□□□□ -0.41
USP6NL-202ENST00000379237 KIAA1468Q9P260 1216 aa12.48□□□□□ -0.41
USP6NL-202ENST00000379237 TRIM29Q14134 588 aa12.48□□□□□ -0.41
USP6NL-202ENST00000379237 FAM53CQ9NYF3 392 aa12.48□□□□□ -0.41
USP6NL-202ENST00000379237 CDC23Q9UJX2 597 aa12.48□□□□□ -0.41
USP6NL-202ENST00000379237 NSD2O96028 1365 aa12.48□□□□□ -0.41
USP6NL-202ENST00000379237 SYKP43405 635 aa12.47□□□□□ -0.41
USP6NL-202ENST00000379237 RBM33Q96EV2 1170 aaKnown RBP12.47□□□□□ -0.41
USP6NL-202ENST00000379237 NAPGQ99747 312 aaPredicted RBP12.47□□□□□ -0.41
USP6NL-202ENST00000379237 SWT1Q5T5J6 900 aaKnown RBP12.47□□□□□ -0.41
USP6NL-202ENST00000379237 PRPF38AQ8NAV1 312 aaKnown RBP12.47□□□□□ -0.41
USP6NL-202ENST00000379237 HINFPQ9BQA5 517 aa12.47□□□□□ -0.41
USP6NL-202ENST00000379237 BOLA2Q9H3K6 86 aa12.47□□□□□ -0.41
USP6NL-202ENST00000379237 ZNF518AQ6AHZ1 1483 aa12.47□□□□□ -0.41
USP6NL-202ENST00000379237 ARID4AP29374 1257 aaPredicted RBP12.47□□□□□ -0.41
USP6NL-202ENST00000379237 MSL1Q68DK7 614 aa12.47□□□□□ -0.41
USP6NL-202ENST00000379237 IQUBQ8NA54 791 aa12.47□□□□□ -0.41
USP6NL-202ENST00000379237 IRAK4Q9NWZ3 460 aa12.47□□□□□ -0.41
USP6NL-202ENST00000379237 EMILIN1Q9Y6C2 1016 aa12.47□□□□□ -0.41
USP6NL-202ENST00000379237 IQGAP2Q13576 1575 aa12.47□□□□□ -0.41
USP6NL-202ENST00000379237 ATP1A3P13637 1013 aa12.47□□□□□ -0.41
USP6NL-202ENST00000379237 MARCKSP29966 332 aaPredicted RBP12.47□□□□□ -0.41
USP6NL-202ENST00000379237 PTH1RQ03431 593 aa12.47□□□□□ -0.41
USP6NL-202ENST00000379237 DHX40Q8IX18 779 aaKnown RBP12.47□□□□□ -0.41
USP6NL-202ENST00000379237 GUCA1BQ9UMX6 200 aa12.47□□□□□ -0.41
USP6NL-202ENST00000379237 NUTM2FA1L443 756 aa12.46□□□□□ -0.41
USP6NL-202ENST00000379237 ZKSCAN8Q15776 578 aaPredicted RBP12.46□□□□□ -0.41
USP6NL-202ENST00000379237 NEK1Q96PY6 1258 aa12.46□□□□□ -0.41
USP6NL-202ENST00000379237 USP28Q96RU2 1077 aa12.46□□□□□ -0.41
USP6NL-202ENST00000379237 JADE2Q9NQC1 790 aa12.46□□□□□ -0.41
USP6NL-202ENST00000379237 CABP1Q9NZU7 370 aa12.46□□□□□ -0.41
USP6NL-202ENST00000379237 MRFAP1Q9Y605 127 aa12.46□□□□□ -0.41
USP6NL-202ENST00000379237 FYB1O15117 783 aa12.46□□□□□ -0.41
USP6NL-202ENST00000379237 ERCC3P19447 782 aa12.46□□□□□ -0.41
USP6NL-202ENST00000379237 ATP1A2P50993 1020 aa12.46□□□□□ -0.41
USP6NL-202ENST00000379237 C8orf76Q96K31 380 aa12.46□□□□□ -0.41
USP6NL-202ENST00000379237 NUP88Q99567 741 aaPredicted RBP12.46□□□□□ -0.41
USP6NL-202ENST00000379237 PTPRGP23470 1445 aa12.46□□□□□ -0.41
USP6NL-202ENST00000379237 CEP170Q5SW79 1584 aa12.46□□□□□ -0.42
USP6NL-202ENST00000379237 NLRP12P59046 1061 aa12.46□□□□□ -0.42
USP6NL-202ENST00000379237 SCRN1Q12765 414 aa12.46□□□□□ -0.42
USP6NL-202ENST00000379237 RRS1Q15050 365 aaKnown RBP12.46□□□□□ -0.42
USP6NL-202ENST00000379237 Q6ZUG5 572 aa12.46□□□□□ -0.42
USP6NL-202ENST00000379237 EGFL6Q8IUX8 553 aa12.46□□□□□ -0.42
USP6NL-202ENST00000379237 IGSF22Q8N9C0 903 aa12.46□□□□□ -0.42
USP6NL-202ENST00000379237 RNF217Q8TC41 542 aa12.46□□□□□ -0.42
USP6NL-202ENST00000379237 DYDC1Q8WWB3 177 aa12.46□□□□□ -0.42
USP6NL-202ENST00000379237 BUB1BO60566 1050 aaPredicted RBP12.45□□□□□ -0.42
USP6NL-202ENST00000379237 ZMYND10O75800 440 aa12.45□□□□□ -0.42
USP6NL-202ENST00000379237 LSG1Q9H089 658 aaKnown RBP12.45□□□□□ -0.42
USP6NL-202ENST00000379237 CD248Q9HCU0 757 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms