RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 PODNQ7Z5L7 613 aa22.92■■□□□ 1.26
PDLIM4-202ENST00000379018 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.92■■□□□ 1.26
PDLIM4-202ENST00000379018 PRKG1Q13976 671 aa22.91■■□□□ 1.26
PDLIM4-202ENST00000379018 REM2Q8IYK8 340 aaPredicted RBP22.91■■□□□ 1.26
PDLIM4-202ENST00000379018 GREM2Q9H772 168 aa22.91■■□□□ 1.26
PDLIM4-202ENST00000379018 MYH3P11055 1940 aa22.9■■□□□ 1.26
PDLIM4-202ENST00000379018 SASH1O94885 1247 aa22.9■■□□□ 1.26
PDLIM4-202ENST00000379018 CALD1Q05682 793 aaKnown RBP22.9■■□□□ 1.26
PDLIM4-202ENST00000379018 CCDC30Q5VVM6 783 aa22.9■■□□□ 1.26
PDLIM4-202ENST00000379018 HPS5Q9UPZ3 1129 aa22.9■■□□□ 1.26
PDLIM4-202ENST00000379018 MED23Q9ULK4 1368 aa22.89■■□□□ 1.26
PDLIM4-202ENST00000379018 OGFOD1Q8N543 542 aa22.89■■□□□ 1.25
PDLIM4-202ENST00000379018 ZNF296Q8WUU4 475 aaPredicted RBP22.89■■□□□ 1.25
PDLIM4-202ENST00000379018 MINPP1Q9UNW1 487 aa22.89■■□□□ 1.25
PDLIM4-202ENST00000379018 NF2P35240 595 aa22.88■■□□□ 1.25
PDLIM4-202ENST00000379018 CCT4P50991 539 aaKnown RBP22.88■■□□□ 1.25
PDLIM4-202ENST00000379018 DACT2Q5SW24 774 aa22.88■■□□□ 1.25
PDLIM4-202ENST00000379018 PI4KAP2A4QPH2 592 aa22.87■■□□□ 1.25
PDLIM4-202ENST00000379018 WNT10BO00744 389 aa22.87■■□□□ 1.25
PDLIM4-202ENST00000379018 IGKV5-2P06315 115 aa22.87■■□□□ 1.25
PDLIM4-202ENST00000379018 CWF19L2Q2TBE0 894 aaKnown RBP22.87■■□□□ 1.25
PDLIM4-202ENST00000379018 TSPYL6Q8N831 410 aa22.87■■□□□ 1.25
PDLIM4-202ENST00000379018 PI4KAP1Q8N8J0 262 aa22.87■■□□□ 1.25
PDLIM4-202ENST00000379018 TTLL11Q8NHH1 800 aa22.87■■□□□ 1.25
PDLIM4-202ENST00000379018 BSDC1Q9NW68 430 aaPredicted RBP22.87■■□□□ 1.25
PDLIM4-202ENST00000379018 NEXNQ0ZGT2 675 aa22.86■■□□□ 1.25
PDLIM4-202ENST00000379018 KSR2Q6VAB6 950 aa22.85■■□□□ 1.25
PDLIM4-202ENST00000379018 UBE3BQ7Z3V4 1068 aa22.85■■□□□ 1.25
PDLIM4-202ENST00000379018 TXNRD3Q86VQ6 643 aa22.85■■□□□ 1.25
PDLIM4-202ENST00000379018 KIAA0825Q8IV33 1275 aa22.85■■□□□ 1.25
PDLIM4-202ENST00000379018 ZNF646O15015 1829 aaPredicted RBP22.85■■□□□ 1.25
PDLIM4-202ENST00000379018 KLRK1P26718 216 aa22.84■■□□□ 1.25
PDLIM4-202ENST00000379018 IGHMBP2P38935 993 aaKnown RBP22.84■■□□□ 1.25
PDLIM4-202ENST00000379018 TSR2Q969E8 191 aaKnown RBP22.84■■□□□ 1.25
PDLIM4-202ENST00000379018 COA1Q9GZY4 146 aa22.84■■□□□ 1.25
PDLIM4-202ENST00000379018 MYO3BQ8WXR4 1341 aa22.83■■□□□ 1.25
PDLIM4-202ENST00000379018 GPR25O00155 361 aa22.83■■□□□ 1.25
PDLIM4-202ENST00000379018 PTPN12Q05209 780 aaKnown RBP22.83■■□□□ 1.25
PDLIM4-202ENST00000379018 STRIP1Q5VSL9 837 aa22.83■■□□□ 1.25
PDLIM4-202ENST00000379018 STK31Q9BXU1 1019 aa22.83■■□□□ 1.25
PDLIM4-202ENST00000379018 FZD1Q9UP38 647 aa22.83■■□□□ 1.25
PDLIM4-202ENST00000379018 KCNJ4P48050 445 aa22.82■■□□□ 1.24
PDLIM4-202ENST00000379018 PKN2Q16513 984 aaKnown RBP22.82■■□□□ 1.24
PDLIM4-202ENST00000379018 TTLL5Q6EMB2 1281 aa22.82■■□□□ 1.24
PDLIM4-202ENST00000379018 ARMC9Q7Z3E5 817 aa22.82■■□□□ 1.24
PDLIM4-202ENST00000379018 NEURL1BA8MQ27 555 aa22.81■■□□□ 1.24
PDLIM4-202ENST00000379018 GTF2IP78347 998 aa22.81■■□□□ 1.24
PDLIM4-202ENST00000379018 SREBF2Q12772 1141 aa22.81■■□□□ 1.24
PDLIM4-202ENST00000379018 PRKRIP1Q9H875 184 aaPredicted RBP22.81■■□□□ 1.24
PDLIM4-202ENST00000379018 ANGEL1Q9UNK9 670 aaKnown RBP22.81■■□□□ 1.24
PDLIM4-202ENST00000379018 ZNF804BA4D1E1 1349 aa22.81■■□□□ 1.24
PDLIM4-202ENST00000379018 ITGA6P23229 1130 aa22.8■■□□□ 1.24
PDLIM4-202ENST00000379018 TM4SF4P48230 202 aa22.8■■□□□ 1.24
PDLIM4-202ENST00000379018 PRPF38BQ5VTL8 546 aaKnown RBP22.8■■□□□ 1.24
PDLIM4-202ENST00000379018 G2E3Q7L622 706 aa22.8■■□□□ 1.24
PDLIM4-202ENST00000379018 APOBEC3FQ8IUX4 373 aaKnown RBP22.8■■□□□ 1.24
PDLIM4-202ENST00000379018 MPHOSPH8Q99549 860 aa22.8■■□□□ 1.24
PDLIM4-202ENST00000379018 CHMP4AQ9BY43 222 aa22.8■■□□□ 1.24
PDLIM4-202ENST00000379018 R3HDMLQ9H3Y0 253 aa22.8■■□□□ 1.24
PDLIM4-202ENST00000379018 LEMD3Q9Y2U8 911 aa22.8■■□□□ 1.24
PDLIM4-202ENST00000379018 FKTNO75072 461 aa22.78■■□□□ 1.24
PDLIM4-202ENST00000379018 PCDH10Q9P2E7 1040 aa22.78■■□□□ 1.24
PDLIM4-202ENST00000379018 FBXO46Q6PJ61 603 aaPredicted RBP22.77■■□□□ 1.24
PDLIM4-202ENST00000379018 ANKRD2Q9GZV1 360 aa22.77■■□□□ 1.24
PDLIM4-202ENST00000379018 F8W031 263 aaPredicted RBP22.76■■□□□ 1.23
PDLIM4-202ENST00000379018 H7C1W4 665 aa22.76■■□□□ 1.23
PDLIM4-202ENST00000379018 SNAP23O00161 211 aa22.76■■□□□ 1.23
PDLIM4-202ENST00000379018 SPRYD7Q5W111 196 aa22.76■■□□□ 1.23
PDLIM4-202ENST00000379018 SLC4A2P04920 1241 aa22.75■■□□□ 1.23
PDLIM4-202ENST00000379018 CHRNDQ07001 517 aa22.75■■□□□ 1.23
PDLIM4-202ENST00000379018 DLGAP5Q15398 846 aa22.75■■□□□ 1.23
PDLIM4-202ENST00000379018 TWISTNBQ3B726 338 aaPredicted RBP22.75■■□□□ 1.23
PDLIM4-202ENST00000379018 GCKRQ14397 625 aa22.74■■□□□ 1.23
PDLIM4-202ENST00000379018 HELBQ8NG08 1087 aaPredicted RBP22.74■■□□□ 1.23
PDLIM4-202ENST00000379018 JAG2Q9Y219 1238 aa22.74■■□□□ 1.23
PDLIM4-202ENST00000379018 CHMP3Q9Y3E7 222 aa22.74■■□□□ 1.23
PDLIM4-202ENST00000379018 PCDHAC2Q9Y5I4 1007 aa22.74■■□□□ 1.23
PDLIM4-202ENST00000379018 CLRN2A0PK11 232 aa22.73■■□□□ 1.23
PDLIM4-202ENST00000379018 TAF5LO75529 589 aa22.73■■□□□ 1.23
PDLIM4-202ENST00000379018 FKBP5Q13451 457 aaPredicted RBP22.73■■□□□ 1.23
PDLIM4-202ENST00000379018 SLC10A4Q96EP9 437 aa22.73■■□□□ 1.23
PDLIM4-202ENST00000379018 DEFB129Q9H1M3 183 aa22.73■■□□□ 1.23
PDLIM4-202ENST00000379018 CD209Q9NNX6 404 aa22.73■■□□□ 1.23
PDLIM4-202ENST00000379018 LDLRAD1Q5T700 205 aa22.72■■□□□ 1.23
PDLIM4-202ENST00000379018 ZBED3Q96IU2 234 aaPredicted RBP22.72■■□□□ 1.23
PDLIM4-202ENST00000379018 CLMNQ96JQ2 1002 aa22.72■■□□□ 1.23
PDLIM4-202ENST00000379018 MYH16Q9H6N6 1097 aa22.72■■□□□ 1.23
PDLIM4-202ENST00000379018 VEZTQ9HBM0 779 aa22.72■■□□□ 1.23
PDLIM4-202ENST00000379018 TRIM17Q9Y577 477 aa22.72■■□□□ 1.23
PDLIM4-202ENST00000379018 ANKRD18BA2A2Z9 1011 aa22.71■■□□□ 1.23
PDLIM4-202ENST00000379018 FLIIQ13045 1269 aa22.71■■□□□ 1.23
PDLIM4-202ENST00000379018 NOM1Q5C9Z4 860 aaKnown RBP22.71■■□□□ 1.23
PDLIM4-202ENST00000379018 CERS5Q8N5B7 392 aa22.71■■□□□ 1.23
PDLIM4-202ENST00000379018 PLA2G12BQ9BX93 195 aa22.71■■□□□ 1.23
PDLIM4-202ENST00000379018 MMP14P50281 582 aa22.7■■□□□ 1.22
PDLIM4-202ENST00000379018 IFNL1Q8IU54 200 aa22.7■■□□□ 1.22
PDLIM4-202ENST00000379018 WNK4Q96J92 1243 aa22.7■■□□□ 1.22
PDLIM4-202ENST00000379018 SSC5DA1L4H1 1573 aa22.69■■□□□ 1.22
PDLIM4-202ENST00000379018 COL1A1P02452 1464 aaPredicted RBP22.69■■□□□ 1.22
PDLIM4-202ENST00000379018 MANSC4A6NHS7 340 aaPredicted RBP22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms