RNA–Protein interactions for RNA: ENST00000379013.6

UPK1A-202, Transcript of uroplakin 1A, humanhuman

TSL 1 (best) BASIC

Gene UPK1A, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-202ENST00000379013 WASHC4Q2M389 1173 aa17.17■□□□□ 0.34
UPK1A-202ENST00000379013 SSH3Q8TE77 659 aa17.17■□□□□ 0.34
UPK1A-202ENST00000379013 PODXL2Q9NZ53 605 aa17.17■□□□□ 0.34
UPK1A-202ENST00000379013 GPRC5DQ9NZD1 345 aa17.17■□□□□ 0.34
UPK1A-202ENST00000379013 ZBTB47Q9UFB7 747 aaPredicted RBP17.17■□□□□ 0.34
UPK1A-202ENST00000379013 ADAMTSL1Q8N6G6 1762 aa17.17■□□□□ 0.34
UPK1A-202ENST00000379013 ITGA6P23229 1130 aa17.16■□□□□ 0.34
UPK1A-202ENST00000379013 POLA2Q14181 598 aa17.16■□□□□ 0.34
UPK1A-202ENST00000379013 FAM161AQ3B820 660 aa17.16■□□□□ 0.34
UPK1A-202ENST00000379013 CIAPIN1Q6FI81 312 aa17.16■□□□□ 0.34
UPK1A-202ENST00000379013 ERC1Q8IUD2 1116 aa17.16■□□□□ 0.34
UPK1A-202ENST00000379013 GCC1Q96CN9 775 aa17.16■□□□□ 0.34
UPK1A-202ENST00000379013 MPHOSPH8Q99549 860 aa17.16■□□□□ 0.34
UPK1A-202ENST00000379013 LRRC37AA6NMS7 1700 aa17.16■□□□□ 0.34
UPK1A-202ENST00000379013 PSMD14O00487 310 aa17.15■□□□□ 0.34
UPK1A-202ENST00000379013 EPHA10Q5JZY3 1008 aa17.15■□□□□ 0.34
UPK1A-202ENST00000379013 DLK2Q6UY11 383 aa17.15■□□□□ 0.34
UPK1A-202ENST00000379013 PNMA8AQ86V59 439 aaPredicted RBP17.15■□□□□ 0.34
UPK1A-202ENST00000379013 ANKRD18AQ8IVF6 992 aa17.15■□□□□ 0.34
UPK1A-202ENST00000379013 COPRSQ9NQ92 184 aa17.15■□□□□ 0.34
UPK1A-202ENST00000379013 PCDHB15Q9Y5E8 787 aa17.15■□□□□ 0.34
UPK1A-202ENST00000379013 TRAF5O00463 557 aa17.14■□□□□ 0.33
UPK1A-202ENST00000379013 EGFRP00533 1210 aa17.14■□□□□ 0.33
UPK1A-202ENST00000379013 OS9Q13438 667 aaPredicted RBP17.14■□□□□ 0.33
UPK1A-202ENST00000379013 TRPM4Q8TD43 1214 aa17.14■□□□□ 0.33
UPK1A-202ENST00000379013 CREBZFQ9NS37 354 aa17.14■□□□□ 0.33
UPK1A-202ENST00000379013 MKRN1Q9UHC7 482 aaKnown RBP17.14■□□□□ 0.33
UPK1A-202ENST00000379013 MINPP1Q9UNW1 487 aa17.14■□□□□ 0.33
UPK1A-202ENST00000379013 PNMA6EA0A0J9YXQ4 647 aa17.13■□□□□ 0.33
UPK1A-202ENST00000379013 UFL1O94874 794 aa17.13■□□□□ 0.33
UPK1A-202ENST00000379013 G3BP1Q13283 466 aaKnown RBP eCLIP17.13■□□□□ 0.33
UPK1A-202ENST00000379013 CNOT7Q9UIV1 285 aaKnown RBP17.13■□□□□ 0.33
UPK1A-202ENST00000379013 ECE2O60344 883 aa17.12■□□□□ 0.33
UPK1A-202ENST00000379013 RAB11FIP3O75154 756 aa17.12■□□□□ 0.33
UPK1A-202ENST00000379013 SURF6O75683 361 aaKnown RBP17.12■□□□□ 0.33
UPK1A-202ENST00000379013 CIAO1O76071 339 aa17.12■□□□□ 0.33
UPK1A-202ENST00000379013 LMOD1P29536 600 aaPredicted RBP17.12■□□□□ 0.33
UPK1A-202ENST00000379013 CST9Q5W186 159 aa17.12■□□□□ 0.33
UPK1A-202ENST00000379013 USP50Q70EL3 339 aaPredicted RBP17.12■□□□□ 0.33
UPK1A-202ENST00000379013 CENPQQ7L2Z9 268 aaPredicted RBP17.12■□□□□ 0.33
UPK1A-202ENST00000379013 TXNRD3Q86VQ6 643 aa17.12■□□□□ 0.33
UPK1A-202ENST00000379013 CNNM1Q9NRU3 951 aa17.12■□□□□ 0.33
UPK1A-202ENST00000379013 ADARB2Q9NS39 739 aaKnown RBP17.12■□□□□ 0.33
UPK1A-202ENST00000379013 ANKIB1Q9P2G1 1089 aa17.12■□□□□ 0.33
UPK1A-202ENST00000379013 PGAP2Q9UHJ9 254 aa17.12■□□□□ 0.33
UPK1A-202ENST00000379013 A0A1B0GUL6 1792 aa17.11■□□□□ 0.33
UPK1A-202ENST00000379013 SNAP23O00161 211 aa17.11■□□□□ 0.33
UPK1A-202ENST00000379013 IL15P40933 162 aaPredicted RBP17.11■□□□□ 0.33
UPK1A-202ENST00000379013 TNIP1Q15025 636 aa17.11■□□□□ 0.33
UPK1A-202ENST00000379013 LDHAL6AQ6ZMR3 332 aa17.11■□□□□ 0.33
UPK1A-202ENST00000379013 SAMD7Q7Z3H4 446 aa17.11■□□□□ 0.33
UPK1A-202ENST00000379013 BSDC1Q9NW68 430 aaPredicted RBP17.11■□□□□ 0.33
UPK1A-202ENST00000379013 GGA1Q9UJY5 639 aa17.11■□□□□ 0.33
UPK1A-202ENST00000379013 NOP58Q9Y2X3 529 aaKnown RBP17.11■□□□□ 0.33
UPK1A-202ENST00000379013 GTF3C3Q9Y5Q9 886 aa17.11■□□□□ 0.33
UPK1A-202ENST00000379013 MROH5Q6ZUA9 1318 aa17.11■□□□□ 0.33
UPK1A-202ENST00000379013 SCN9AQ15858 1988 aa17.1■□□□□ 0.33
UPK1A-202ENST00000379013 VIL1P09327 827 aaKnown RBP17.1■□□□□ 0.33
UPK1A-202ENST00000379013 KLRK1P26718 216 aa17.1■□□□□ 0.33
UPK1A-202ENST00000379013 PTPN12Q05209 780 aaKnown RBP17.1■□□□□ 0.33
UPK1A-202ENST00000379013 SIRT2Q8IXJ6 389 aa17.1■□□□□ 0.33
UPK1A-202ENST00000379013 ZC3H12CQ9C0D7 883 aaKnown RBP17.1■□□□□ 0.33
UPK1A-202ENST00000379013 DCTPP1Q9H773 170 aa17.1■□□□□ 0.33
UPK1A-202ENST00000379013 TMEM88BA6NKF7 163 aa17.09■□□□□ 0.33
UPK1A-202ENST00000379013 EYA2O00167 538 aa17.09■□□□□ 0.33
UPK1A-202ENST00000379013 RFX5P48382 616 aaPredicted RBP17.09■□□□□ 0.33
UPK1A-202ENST00000379013 MICALL2Q8IY33 904 aa17.09■□□□□ 0.33
UPK1A-202ENST00000379013 KIF1BPQ96EK5 621 aa17.09■□□□□ 0.33
UPK1A-202ENST00000379013 GLIS2Q9BZE0 524 aaPredicted RBP17.09■□□□□ 0.33
UPK1A-202ENST00000379013 XDHP47989 1333 aa17.08■□□□□ 0.32
UPK1A-202ENST00000379013 VEGFBP49765 207 aa17.08■□□□□ 0.32
UPK1A-202ENST00000379013 DPF2Q92785 391 aa17.08■□□□□ 0.32
UPK1A-202ENST00000379013 EYA3Q99504 573 aa17.08■□□□□ 0.32
UPK1A-202ENST00000379013 MXD3Q9BW11 206 aa17.08■□□□□ 0.32
UPK1A-202ENST00000379013 ANKRD2Q9GZV1 360 aa17.08■□□□□ 0.32
UPK1A-202ENST00000379013 CNTNAP1P78357 1384 aa17.07■□□□□ 0.32
UPK1A-202ENST00000379013 ASTN2O75129 1339 aaPredicted RBP17.07■□□□□ 0.32
UPK1A-202ENST00000379013 ATP2B4P23634 1241 aa17.07■□□□□ 0.32
UPK1A-202ENST00000379013 TBC1D10BQ4KMP7 808 aaPredicted RBP17.07■□□□□ 0.32
UPK1A-202ENST00000379013 SMC5Q8IY18 1101 aa17.07■□□□□ 0.32
UPK1A-202ENST00000379013 GMLQ99445 158 aa17.07■□□□□ 0.32
UPK1A-202ENST00000379013 LRRCC1Q9C099 1032 aa17.07■□□□□ 0.32
UPK1A-202ENST00000379013 SIL1Q9H173 461 aa17.07■□□□□ 0.32
UPK1A-202ENST00000379013 CEP126Q9P2H0 1117 aa17.07■□□□□ 0.32
UPK1A-202ENST00000379013 AKAP2Q9Y2D5 859 aa17.07■□□□□ 0.32
UPK1A-202ENST00000379013 METTL24Q5JXM2 366 aa17.06■□□□□ 0.32
UPK1A-202ENST00000379013 RBM26Q5T8P6 1007 aaKnown RBP17.06■□□□□ 0.32
UPK1A-202ENST00000379013 HELBQ8NG08 1087 aaPredicted RBP17.06■□□□□ 0.32
UPK1A-202ENST00000379013 ZNF594Q96JF6 807 aaPredicted RBP17.06■□□□□ 0.32
UPK1A-202ENST00000379013 EXOC6BQ9Y2D4 811 aa17.06■□□□□ 0.32
UPK1A-202ENST00000379013 ARAP2Q8WZ64 1704 aa17.05■□□□□ 0.32
UPK1A-202ENST00000379013 IRS2Q9Y4H2 1338 aa17.05■□□□□ 0.32
UPK1A-202ENST00000379013 COL13A1Q5TAT6 717 aaPredicted RBP17.05■□□□□ 0.32
UPK1A-202ENST00000379013 CLASRPQ8N2M8 674 aaKnown RBP17.05■□□□□ 0.32
UPK1A-202ENST00000379013 PA2G4Q9UQ80 394 aaKnown RBP17.05■□□□□ 0.32
UPK1A-202ENST00000379013 RASSF10A6NK89 507 aa17.04■□□□□ 0.32
UPK1A-202ENST00000379013 H7C1D1 291 aa17.04■□□□□ 0.32
UPK1A-202ENST00000379013 TAF5LO75529 589 aa17.04■□□□□ 0.32
UPK1A-202ENST00000379013 HSPA1AP0DMV8 641 aaKnown RBP17.04■□□□□ 0.32
UPK1A-202ENST00000379013 HSPA1BP0DMV9 641 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms