RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 PCDHB15Q9Y5E8 787 aa23.22■■□□□ 1.31
SSU72-203ENST00000378725 G3V3G9 751 aa23.21■■□□□ 1.31
SSU72-203ENST00000378725 CXCL9Q07325 125 aa23.21■■□□□ 1.31
SSU72-203ENST00000378725 TFCP2Q12800 502 aa23.21■■□□□ 1.31
SSU72-203ENST00000378725 DCAF8Q5TAQ9 597 aa23.21■■□□□ 1.31
SSU72-203ENST00000378725 PODNQ7Z5L7 613 aa23.21■■□□□ 1.31
SSU72-203ENST00000378725 EXOC6Q8TAG9 804 aa23.21■■□□□ 1.31
SSU72-203ENST00000378725 LPIN2Q92539 896 aa23.21■■□□□ 1.31
SSU72-203ENST00000378725 ZNF541Q9H0D2 1346 aa23.21■■□□□ 1.31
SSU72-203ENST00000378725 TIAM2Q8IVF5 1701 aa23.2■■□□□ 1.3
SSU72-203ENST00000378725 FAM84BQ96KN1 310 aaPredicted RBP23.2■■□□□ 1.3
SSU72-203ENST00000378725 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.2■■□□□ 1.3
SSU72-203ENST00000378725 IFIT1P09914 478 aaKnown RBP23.19■■□□□ 1.3
SSU72-203ENST00000378725 HSP90AB4PQ58FF6 505 aa23.19■■□□□ 1.3
SSU72-203ENST00000378725 FBXO33Q7Z6M2 555 aa23.19■■□□□ 1.3
SSU72-203ENST00000378725 CD209Q9NNX6 404 aa23.19■■□□□ 1.3
SSU72-203ENST00000378725 AKAP2Q9Y2D5 859 aa23.19■■□□□ 1.3
SSU72-203ENST00000378725 DDNO94850 711 aaPredicted RBP23.18■■□□□ 1.3
SSU72-203ENST00000378725 SLC5A1P13866 664 aa23.18■■□□□ 1.3
SSU72-203ENST00000378725 ATP2B3Q16720 1220 aa23.18■■□□□ 1.3
SSU72-203ENST00000378725 GPC2Q8N158 579 aa23.18■■□□□ 1.3
SSU72-203ENST00000378725 KCNQ5Q9NR82 932 aa23.18■■□□□ 1.3
SSU72-203ENST00000378725 KDM2BQ8NHM5 1336 aa23.17■■□□□ 1.3
SSU72-203ENST00000378725 RAD17O75943 681 aa23.17■■□□□ 1.3
SSU72-203ENST00000378725 IL1R1P14778 569 aa23.17■■□□□ 1.3
SSU72-203ENST00000378725 HIBADHP31937 336 aaKnown RBP23.17■■□□□ 1.3
SSU72-203ENST00000378725 OS9Q13438 667 aaPredicted RBP23.17■■□□□ 1.3
SSU72-203ENST00000378725 TNIP1Q15025 636 aa23.17■■□□□ 1.3
SSU72-203ENST00000378725 CIAPIN1Q6FI81 312 aa23.17■■□□□ 1.3
SSU72-203ENST00000378725 ZNF804AQ7Z570 1209 aa23.17■■□□□ 1.3
SSU72-203ENST00000378725 ZNF784Q8NCA9 323 aaPredicted RBP23.17■■□□□ 1.3
SSU72-203ENST00000378725 GPR108Q9NPR9 543 aa23.17■■□□□ 1.3
SSU72-203ENST00000378725 EXOC6BQ9Y2D4 811 aa23.17■■□□□ 1.3
SSU72-203ENST00000378725 CENPBP07199 599 aaPredicted RBP23.16■■□□□ 1.3
SSU72-203ENST00000378725 GYG1P46976 350 aa23.16■■□□□ 1.3
SSU72-203ENST00000378725 TIMM10P62072 90 aa23.16■■□□□ 1.3
SSU72-203ENST00000378725 ERC1Q8IUD2 1116 aa23.16■■□□□ 1.3
SSU72-203ENST00000378725 IRX6P78412 446 aaPredicted RBP23.15■■□□□ 1.3
SSU72-203ENST00000378725 CAVIN4Q5BKX8 364 aa23.15■■□□□ 1.3
SSU72-203ENST00000378725 TDRD7Q8NHU6 1098 aaKnown RBP23.15■■□□□ 1.3
SSU72-203ENST00000378725 L3MBTL3Q96JM7 780 aaPredicted RBP23.15■■□□□ 1.3
SSU72-203ENST00000378725 A0A1B0GUL7 405 aa23.14■■□□□ 1.29
SSU72-203ENST00000378725 PSMD14O00487 310 aa23.14■■□□□ 1.29
SSU72-203ENST00000378725 RAB11FIP3O75154 756 aa23.14■■□□□ 1.29
SSU72-203ENST00000378725 VIL1P09327 827 aaKnown RBP23.14■■□□□ 1.29
SSU72-203ENST00000378725 DCTPP1Q9H773 170 aa23.14■■□□□ 1.29
SSU72-203ENST00000378725 USP17L3A6NCW0 530 aa23.13■■□□□ 1.29
SSU72-203ENST00000378725 USP17L4A6NCW7 530 aa23.13■■□□□ 1.29
SSU72-203ENST00000378725 POTECB2RU33 542 aa23.13■■□□□ 1.29
SSU72-203ENST00000378725 BCAMP50895 628 aa23.13■■□□□ 1.29
SSU72-203ENST00000378725 USP17L1Q7RTZ2 530 aa23.13■■□□□ 1.29
SSU72-203ENST00000378725 RHPN1Q8TCX5 695 aa23.13■■□□□ 1.29
SSU72-203ENST00000378725 ZNF526Q8TF50 670 aaPredicted RBP23.13■■□□□ 1.29
SSU72-203ENST00000378725 GJA3Q9Y6H8 435 aa23.13■■□□□ 1.29
SSU72-203ENST00000378725 ZBTB22O15209 634 aa23.12■■□□□ 1.29
SSU72-203ENST00000378725 TNNI3KQ59H18 835 aa23.12■■□□□ 1.29
SSU72-203ENST00000378725 STRIP1Q5VSL9 837 aa23.12■■□□□ 1.29
SSU72-203ENST00000378725 VPS37DQ86XT2 251 aa23.12■■□□□ 1.29
SSU72-203ENST00000378725 GPBP1L1Q9HC44 474 aaPredicted RBP23.12■■□□□ 1.29
SSU72-203ENST00000378725 FPGT-TNNI3KV9GXZ4 949 aa23.12■■□□□ 1.29
SSU72-203ENST00000378725 ADORA1P30542 326 aa23.11■■□□□ 1.29
SSU72-203ENST00000378725 HDAC1Q13547 482 aaPredicted RBP23.11■■□□□ 1.29
SSU72-203ENST00000378725 TTLL5Q6EMB2 1281 aa23.11■■□□□ 1.29
SSU72-203ENST00000378725 KIF1BPQ96EK5 621 aa23.11■■□□□ 1.29
SSU72-203ENST00000378725 XAGE2Q96GT9 111 aa23.11■■□□□ 1.29
SSU72-203ENST00000378725 ZNF609O15014 1411 aa23.1■■□□□ 1.29
SSU72-203ENST00000378725 DACT2Q5SW24 774 aa23.1■■□□□ 1.29
SSU72-203ENST00000378725 NEUROD6Q96NK8 337 aa23.1■■□□□ 1.29
SSU72-203ENST00000378725 RRAGCQ9HB90 399 aa23.1■■□□□ 1.29
SSU72-203ENST00000378725 WDR90Q96KV7 1748 aa23.1■■□□□ 1.29
SSU72-203ENST00000378725 FAM205AQ6ZU69 1335 aa23.09■■□□□ 1.29
SSU72-203ENST00000378725 VEGFAP15692 232 aaPredicted RBP23.09■■□□□ 1.29
SSU72-203ENST00000378725 RPS12P25398 132 aaKnown RBP23.09■■□□□ 1.29
SSU72-203ENST00000378725 SCNN1DP51172 638 aa23.09■■□□□ 1.29
SSU72-203ENST00000378725 GTF2IP78347 998 aa23.09■■□□□ 1.29
SSU72-203ENST00000378725 RSBN1LQ6PCB5 846 aaPredicted RBP23.09■■□□□ 1.29
SSU72-203ENST00000378725 DPF2Q92785 391 aa23.09■■□□□ 1.29
SSU72-203ENST00000378725 EAF2Q96CJ1 260 aaPredicted RBP23.09■■□□□ 1.29
SSU72-203ENST00000378725 NMRK2Q9NPI5 230 aa23.09■■□□□ 1.29
SSU72-203ENST00000378725 GMPSP49915 693 aaPredicted RBP23.08■■□□□ 1.29
SSU72-203ENST00000378725 CCDC102BQ68D86 513 aa23.08■■□□□ 1.29
SSU72-203ENST00000378725 AGBL3Q8NEM8 1001 aa23.08■■□□□ 1.29
SSU72-203ENST00000378725 GMLQ99445 158 aa23.08■■□□□ 1.29
SSU72-203ENST00000378725 ZBTB12Q9Y330 459 aaPredicted RBP23.08■■□□□ 1.29
SSU72-203ENST00000378725 SCN9AQ15858 1988 aa23.08■■□□□ 1.29
SSU72-203ENST00000378725 PHKA1P46020 1223 aa23.07■■□□□ 1.28
SSU72-203ENST00000378725 FKBP1AP62942 108 aaKnown RBP23.07■■□□□ 1.28
SSU72-203ENST00000378725 GNL3LQ9NVN8 582 aaKnown RBP23.07■■□□□ 1.28
SSU72-203ENST00000378725 GPRC5DQ9NZD1 345 aa23.07■■□□□ 1.28
SSU72-203ENST00000378725 IQCA1LA6NCM1 817 aa23.06■■□□□ 1.28
SSU72-203ENST00000378725 RWDD1Q9H446 243 aaPredicted RBP23.06■■□□□ 1.28
SSU72-203ENST00000378725 IL1RAPL2Q9NP60 686 aa23.06■■□□□ 1.28
SSU72-203ENST00000378725 APBB1O00213 710 aa23.05■■□□□ 1.28
SSU72-203ENST00000378725 KIF3CO14782 793 aa23.05■■□□□ 1.28
SSU72-203ENST00000378725 SEMA3EO15041 775 aa23.05■■□□□ 1.28
SSU72-203ENST00000378725 CLASRPQ8N2M8 674 aaKnown RBP23.05■■□□□ 1.28
SSU72-203ENST00000378725 DBNDD2Q9BQY9 259 aa23.05■■□□□ 1.28
SSU72-203ENST00000378725 MXD3Q9BW11 206 aa23.05■■□□□ 1.28
SSU72-203ENST00000378725 LRRCC1Q9C099 1032 aa23.05■■□□□ 1.28
SSU72-203ENST00000378725 CCDC8Q9H0W5 538 aaPredicted RBP23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms