RNA–Protein interactions for RNA: ENST00000378152.8

ARHGEF1-204, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-204ENST00000378152 FPGT-TNNI3KV9GXZ4 949 aa18.76■□□□□ 0.59
ARHGEF1-204ENST00000378152 ATP5JP18859 108 aa18.75■□□□□ 0.59
ARHGEF1-204ENST00000378152 CDC25BP30305 580 aa18.75■□□□□ 0.59
ARHGEF1-204ENST00000378152 COPS6Q7L5N1 327 aa18.75■□□□□ 0.59
ARHGEF1-204ENST00000378152 NCOA5Q9HCD5 579 aaKnown RBP18.75■□□□□ 0.59
ARHGEF1-204ENST00000378152 CCDC73Q6ZRK6 1079 aa18.75■□□□□ 0.59
ARHGEF1-204ENST00000378152 CCDC69A6NI79 296 aa18.75■□□□□ 0.59
ARHGEF1-204ENST00000378152 PTPN14Q15678 1187 aa18.75■□□□□ 0.59
ARHGEF1-204ENST00000378152 NSUN7Q8NE18 718 aaKnown RBP18.75■□□□□ 0.59
ARHGEF1-204ENST00000378152 HEG1Q9ULI3 1381 aa18.75■□□□□ 0.59
ARHGEF1-204ENST00000378152 MRC1P22897 1456 aa18.75■□□□□ 0.59
ARHGEF1-204ENST00000378152 PTPDC1A2A3K4 754 aa18.74■□□□□ 0.59
ARHGEF1-204ENST00000378152 MCMDC2Q4G0Z9 681 aa18.74■□□□□ 0.59
ARHGEF1-204ENST00000378152 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.74■□□□□ 0.59
ARHGEF1-204ENST00000378152 CGNQ9P2M7 1197 aaKnown RBP18.74■□□□□ 0.59
ARHGEF1-204ENST00000378152 A0A0G2JLW4 131 aa18.74■□□□□ 0.59
ARHGEF1-204ENST00000378152 KINO60870 393 aaKnown RBP18.74■□□□□ 0.59
ARHGEF1-204ENST00000378152 CTDNEP1O95476 244 aa18.74■□□□□ 0.59
ARHGEF1-204ENST00000378152 CAVIN2O95810 425 aa18.74■□□□□ 0.59
ARHGEF1-204ENST00000378152 ME1P48163 572 aa18.74■□□□□ 0.59
ARHGEF1-204ENST00000378152 SNW1Q13573 536 aaKnown RBP18.74■□□□□ 0.59
ARHGEF1-204ENST00000378152 SYCP1Q15431 976 aa18.74■□□□□ 0.59
ARHGEF1-204ENST00000378152 SARM1Q6SZW1 724 aa18.74■□□□□ 0.59
ARHGEF1-204ENST00000378152 CHST3Q7LGC8 479 aa18.74■□□□□ 0.59
ARHGEF1-204ENST00000378152 DHX40Q8IX18 779 aaKnown RBP18.74■□□□□ 0.59
ARHGEF1-204ENST00000378152 MRFAP1L1Q96HT8 127 aa18.74■□□□□ 0.59
ARHGEF1-204ENST00000378152 MEGF6O75095 1541 aa18.74■□□□□ 0.59
ARHGEF1-204ENST00000378152 AOPEPQ8N6M6 819 aa18.73■□□□□ 0.59
ARHGEF1-204ENST00000378152 SMARCC2Q8TAQ2 1214 aa18.73■□□□□ 0.59
ARHGEF1-204ENST00000378152 RCOR1Q9UKL0 485 aa18.73■□□□□ 0.59
ARHGEF1-204ENST00000378152 ZNF215Q9UL58 517 aaPredicted RBP18.73■□□□□ 0.59
ARHGEF1-204ENST00000378152 FSIP1Q8NA03 581 aa18.73■□□□□ 0.59
ARHGEF1-204ENST00000378152 PFKFB2O60825 505 aa18.72■□□□□ 0.59
ARHGEF1-204ENST00000378152 PTPN12Q05209 780 aaKnown RBP18.72■□□□□ 0.59
ARHGEF1-204ENST00000378152 CABLES1Q8TDN4 633 aa18.72■□□□□ 0.59
ARHGEF1-204ENST00000378152 COL5A2P05997 1499 aaPredicted RBP18.72■□□□□ 0.59
ARHGEF1-204ENST00000378152 CTAGE5O15320 804 aa18.72■□□□□ 0.59
ARHGEF1-204ENST00000378152 UBE3BQ7Z3V4 1068 aa18.72■□□□□ 0.59
ARHGEF1-204ENST00000378152 ZNF771Q7L3S4 317 aaPredicted RBP18.72■□□□□ 0.59
ARHGEF1-204ENST00000378152 NPHP1O15259 732 aa18.71■□□□□ 0.59
ARHGEF1-204ENST00000378152 KIF20AO95235 890 aa18.71■□□□□ 0.59
ARHGEF1-204ENST00000378152 RBM6P78332 1123 aaKnown RBP18.71■□□□□ 0.59
ARHGEF1-204ENST00000378152 CCZ1BP86790 482 aa18.71■□□□□ 0.59
ARHGEF1-204ENST00000378152 CCZ1P86791 482 aaPredicted RBP18.71■□□□□ 0.59
ARHGEF1-204ENST00000378152 ATP5J2-PTCD1G3V325 749 aa18.71■□□□□ 0.59
ARHGEF1-204ENST00000378152 PTCD1O75127 700 aaKnown RBP18.71■□□□□ 0.59
ARHGEF1-204ENST00000378152 DHX32Q7L7V1 743 aaKnown RBP18.71■□□□□ 0.59
ARHGEF1-204ENST00000378152 METTL22Q9BUU2 404 aaPredicted RBP18.71■□□□□ 0.59
ARHGEF1-204ENST00000378152 COPRSQ9NQ92 184 aa18.71■□□□□ 0.59
ARHGEF1-204ENST00000378152 ANO10Q9NW15 660 aa18.71■□□□□ 0.59
ARHGEF1-204ENST00000378152 DDX41Q9UJV9 622 aaKnown RBP18.71■□□□□ 0.59
ARHGEF1-204ENST00000378152 RFX5P48382 616 aaPredicted RBP18.7■□□□□ 0.58
ARHGEF1-204ENST00000378152 NAA16Q6N069 864 aaPredicted RBP18.7■□□□□ 0.58
ARHGEF1-204ENST00000378152 SYTL4Q96C24 671 aaPredicted RBP18.7■□□□□ 0.58
ARHGEF1-204ENST00000378152 FAM160A1Q05DH4 1040 aa18.7■□□□□ 0.58
ARHGEF1-204ENST00000378152 NYAP1Q6ZVC0 841 aa18.7■□□□□ 0.58
ARHGEF1-204ENST00000378152 COL14A1Q05707 1796 aaKnown RBP18.7■□□□□ 0.58
ARHGEF1-204ENST00000378152 GOLIM4O00461 696 aa18.69■□□□□ 0.58
ARHGEF1-204ENST00000378152 NEMFO60524 1076 aa18.69■□□□□ 0.58
ARHGEF1-204ENST00000378152 ZNF790Q6PG37 636 aa18.69■□□□□ 0.58
ARHGEF1-204ENST00000378152 ENGASEQ8NFI3 743 aa18.69■□□□□ 0.58
ARHGEF1-204ENST00000378152 NEUROD6Q96NK8 337 aa18.69■□□□□ 0.58
ARHGEF1-204ENST00000378152 HAUS7Q99871 368 aa18.69■□□□□ 0.58
ARHGEF1-204ENST00000378152 LLPHQ9BRT6 129 aaKnown RBP18.69■□□□□ 0.58
ARHGEF1-204ENST00000378152 A0A1B0GVL5 298 aa18.69■□□□□ 0.58
ARHGEF1-204ENST00000378152 CEP57L1Q8IYX8 460 aa18.69■□□□□ 0.58
ARHGEF1-204ENST00000378152 KIF18AQ8NI77 898 aa18.69■□□□□ 0.58
ARHGEF1-204ENST00000378152 ZNF396Q96N95 335 aaPredicted RBP18.69■□□□□ 0.58
ARHGEF1-204ENST00000378152 SDF4Q9BRK5 362 aa18.69■□□□□ 0.58
ARHGEF1-204ENST00000378152 SHANK3Q9BYB0 1731 aa18.69■□□□□ 0.58
ARHGEF1-204ENST00000378152 KMT5BQ4FZB7 885 aa18.69■□□□□ 0.58
ARHGEF1-204ENST00000378152 ANKRD13DQ6ZTN6 518 aa18.69■□□□□ 0.58
ARHGEF1-204ENST00000378152 CCAR2Q8N163 923 aaKnown RBP18.69■□□□□ 0.58
ARHGEF1-204ENST00000378152 OTUD7BQ6GQQ9 843 aa18.68■□□□□ 0.58
ARHGEF1-204ENST00000378152 ILDR1Q86SU0 546 aaPredicted RBP18.68■□□□□ 0.58
ARHGEF1-204ENST00000378152 BBXQ8WY36 941 aaPredicted RBP18.68■□□□□ 0.58
ARHGEF1-204ENST00000378152 ELF2Q15723 593 aa18.68■□□□□ 0.58
ARHGEF1-204ENST00000378152 NFATC2IPQ8NCF5 419 aa18.68■□□□□ 0.58
ARHGEF1-204ENST00000378152 WDR17Q8IZU2 1322 aa18.67■□□□□ 0.58
ARHGEF1-204ENST00000378152 PCDHA7Q9UN72 937 aa18.67■□□□□ 0.58
ARHGEF1-204ENST00000378152 COL16A1Q07092 1604 aaPredicted RBP18.67■□□□□ 0.58
ARHGEF1-204ENST00000378152 KDM6AO15550 1401 aaPredicted RBP18.67■□□□□ 0.58
ARHGEF1-204ENST00000378152 KBTBD3Q8NAB2 608 aa18.67■□□□□ 0.58
ARHGEF1-204ENST00000378152 FMNL2Q96PY5 1086 aa18.67■□□□□ 0.58
ARHGEF1-204ENST00000378152 PLCH1Q4KWH8 1693 aa18.67■□□□□ 0.58
ARHGEF1-204ENST00000378152 A0A087WZG4 1122 aa18.66■□□□□ 0.58
ARHGEF1-204ENST00000378152 BIN1O00499 593 aa18.66■□□□□ 0.58
ARHGEF1-204ENST00000378152 HMGB1P09429 215 aaKnown RBP18.66■□□□□ 0.58
ARHGEF1-204ENST00000378152 NBPF11Q86T75 865 aa18.66■□□□□ 0.58
ARHGEF1-204ENST00000378152 ZNF496Q96IT1 587 aaPredicted RBP18.66■□□□□ 0.58
ARHGEF1-204ENST00000378152 E7EWF7 191 aa18.66■□□□□ 0.58
ARHGEF1-204ENST00000378152 SMC2O95347 1197 aa18.66■□□□□ 0.58
ARHGEF1-204ENST00000378152 TATP17735 454 aaPredicted RBP18.66■□□□□ 0.58
ARHGEF1-204ENST00000378152 CHRNA2Q15822 529 aa18.66■□□□□ 0.58
ARHGEF1-204ENST00000378152 ZNF397Q8NF99 534 aaPredicted RBP18.66■□□□□ 0.58
ARHGEF1-204ENST00000378152 RAPGEF4Q8WZA2 1011 aa18.66■□□□□ 0.58
ARHGEF1-204ENST00000378152 GPHNQ9NQX3 736 aaPredicted RBP18.66■□□□□ 0.58
ARHGEF1-204ENST00000378152 NLRP2Q9NX02 1062 aa18.66■□□□□ 0.58
ARHGEF1-204ENST00000378152 POLR3DP05423 398 aaPredicted RBP18.65■□□□□ 0.58
ARHGEF1-204ENST00000378152 PDIA3P30101 505 aaKnown RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms