RNA–Protein interactions for RNA: ENST00000376806.9

HLA-A-202, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,854 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-202ENST00000376806 LRRFIP1Q32MZ4 808 aaKnown RBP20.11■□□□□ 0.81
HLA-A-202ENST00000376806 SLFNL1Q499Z3 407 aa20.11■□□□□ 0.81
HLA-A-202ENST00000376806 TAF6LQ9Y6J9 622 aa20.11■□□□□ 0.81
HLA-A-202ENST00000376806 GNPATO15228 680 aa20.11■□□□□ 0.81
HLA-A-202ENST00000376806 FGFR2P21802 821 aa20.11■□□□□ 0.81
HLA-A-202ENST00000376806 MCAMP43121 646 aa20.11■□□□□ 0.81
HLA-A-202ENST00000376806 MPHOSPH8Q99549 860 aa20.11■□□□□ 0.81
HLA-A-202ENST00000376806 NARFQ9UHQ1 456 aa20.11■□□□□ 0.81
HLA-A-202ENST00000376806 BAG4O95429 457 aaKnown RBP20.1■□□□□ 0.81
HLA-A-202ENST00000376806 PI16Q6UXB8 463 aa20.1■□□□□ 0.81
HLA-A-202ENST00000376806 BCL2L12Q9HB09 334 aa20.1■□□□□ 0.81
HLA-A-202ENST00000376806 ZDHHC9Q9Y397 364 aa20.1■□□□□ 0.81
HLA-A-202ENST00000376806 APBA3O96018 575 aa20.09■□□□□ 0.81
HLA-A-202ENST00000376806 ZFYP08048 801 aaPredicted RBP20.09■□□□□ 0.81
HLA-A-202ENST00000376806 PTMSP20962 102 aa20.09■□□□□ 0.81
HLA-A-202ENST00000376806 IGHMBP2P38935 993 aaKnown RBP20.09■□□□□ 0.81
HLA-A-202ENST00000376806 KRT32Q14532 448 aa20.09■□□□□ 0.81
HLA-A-202ENST00000376806 ERFEQ4G0M1 354 aa20.09■□□□□ 0.81
HLA-A-202ENST00000376806 BLOC1S2Q6QNY1 142 aa20.09■□□□□ 0.81
HLA-A-202ENST00000376806 SMIM5Q71RC9 77 aa20.09■□□□□ 0.81
HLA-A-202ENST00000376806 LPIN2Q92539 896 aa20.09■□□□□ 0.81
HLA-A-202ENST00000376806 DSCC1Q9BVC3 393 aa20.09■□□□□ 0.81
HLA-A-202ENST00000376806 UBR3Q6ZT12 1888 aa20.09■□□□□ 0.81
HLA-A-202ENST00000376806 M0R2C6 588 aa20.09■□□□□ 0.81
HLA-A-202ENST00000376806 ARID4AP29374 1257 aaPredicted RBP20.09■□□□□ 0.81
HLA-A-202ENST00000376806 TBC1D9BQ66K14 1250 aa20.09■□□□□ 0.81
HLA-A-202ENST00000376806 HELBQ8NG08 1087 aaPredicted RBP20.09■□□□□ 0.81
HLA-A-202ENST00000376806 TRAK2O60296 914 aa20.08■□□□□ 0.81
HLA-A-202ENST00000376806 LARGE1O95461 756 aa20.08■□□□□ 0.81
HLA-A-202ENST00000376806 SLC5A1P13866 664 aa20.08■□□□□ 0.81
HLA-A-202ENST00000376806 RPS6KB1P23443 525 aa20.08■□□□□ 0.81
HLA-A-202ENST00000376806 SRP68Q9UHB9 627 aaKnown RBP20.08■□□□□ 0.81
HLA-A-202ENST00000376806 PHKA1P46020 1223 aa20.07■□□□□ 0.8
HLA-A-202ENST00000376806 CCDC102BQ68D86 513 aa20.07■□□□□ 0.8
HLA-A-202ENST00000376806 PROM2Q8N271 834 aa20.07■□□□□ 0.8
HLA-A-202ENST00000376806 ZSCAN31Q96LW9 406 aaPredicted RBP20.07■□□□□ 0.8
HLA-A-202ENST00000376806 LARP6Q9BRS8 491 aaKnown RBP20.07■□□□□ 0.8
HLA-A-202ENST00000376806 SH2B1Q9NRF2 756 aaPredicted RBP20.07■□□□□ 0.8
HLA-A-202ENST00000376806 RTCBQ9Y3I0 505 aaKnown RBP20.07■□□□□ 0.8
HLA-A-202ENST00000376806 GOLGA6L22H0YM25 854 aa20.07■□□□□ 0.8
HLA-A-202ENST00000376806 CYP21A2P08686 494 aa20.07■□□□□ 0.8
HLA-A-202ENST00000376806 UQCRFS1P1P0C7P4 283 aa20.07■□□□□ 0.8
HLA-A-202ENST00000376806 COL9A3Q14050 684 aaPredicted RBP20.07■□□□□ 0.8
HLA-A-202ENST00000376806 BICDL1Q6ZP65 573 aa20.07■□□□□ 0.8
HLA-A-202ENST00000376806 OSBP2Q969R2 916 aa20.07■□□□□ 0.8
HLA-A-202ENST00000376806 ALDH8A1Q9H2A2 487 aaPredicted RBP20.07■□□□□ 0.8
HLA-A-202ENST00000376806 LRRC4BQ9NT99 713 aa20.07■□□□□ 0.8
HLA-A-202ENST00000376806 TNS1Q9HBL0 1735 aaKnown RBP20.06■□□□□ 0.8
HLA-A-202ENST00000376806 ILDR2Q71H61 639 aa20.06■□□□□ 0.8
HLA-A-202ENST00000376806 CDC5LQ99459 802 aaKnown RBP20.06■□□□□ 0.8
HLA-A-202ENST00000376806 TNRC6CQ9HCJ0 1690 aaKnown RBP20.06■□□□□ 0.8
HLA-A-202ENST00000376806 ZPR1O75312 459 aa20.05■□□□□ 0.8
HLA-A-202ENST00000376806 BRD1O95696 1058 aa20.05■□□□□ 0.8
HLA-A-202ENST00000376806 HSPD1P10809 573 aaKnown RBP20.05■□□□□ 0.8
HLA-A-202ENST00000376806 TTF1Q15361 905 aaPredicted RBP20.05■□□□□ 0.8
HLA-A-202ENST00000376806 SF3B3Q15393 1217 aaKnown RBP20.05■□□□□ 0.8
HLA-A-202ENST00000376806 C3orf67Q6ZVT6 689 aa20.05■□□□□ 0.8
HLA-A-202ENST00000376806 APPBP2Q92624 585 aa20.05■□□□□ 0.8
HLA-A-202ENST00000376806 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.05■□□□□ 0.8
HLA-A-202ENST00000376806 AMIGO3Q86WK7 504 aa20.05■□□□□ 0.8
HLA-A-202ENST00000376806 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.05■□□□□ 0.8
HLA-A-202ENST00000376806 NYXQ9GZU5 481 aa20.05■□□□□ 0.8
HLA-A-202ENST00000376806 ANKRD1Q15327 319 aa20.04■□□□□ 0.8
HLA-A-202ENST00000376806 WASHC4Q2M389 1173 aa20.04■□□□□ 0.8
HLA-A-202ENST00000376806 NEK1Q96PY6 1258 aa20.04■□□□□ 0.8
HLA-A-202ENST00000376806 SLC10A5Q5PT55 438 aa20.03■□□□□ 0.8
HLA-A-202ENST00000376806 ZSCAN25Q6NSZ9 544 aa20.03■□□□□ 0.8
HLA-A-202ENST00000376806 MYH13Q9UKX3 1938 aa20.03■□□□□ 0.8
HLA-A-202ENST00000376806 PLSCR1O15162 318 aa20.03■□□□□ 0.8
HLA-A-202ENST00000376806 CHRNDQ07001 517 aa20.03■□□□□ 0.8
HLA-A-202ENST00000376806 ST3GAL1Q11201 340 aa20.03■□□□□ 0.8
HLA-A-202ENST00000376806 TOB2Q14106 344 aaPredicted RBP20.03■□□□□ 0.8
HLA-A-202ENST00000376806 ME3Q16798 604 aa20.03■□□□□ 0.8
HLA-A-202ENST00000376806 CCDC83Q8IWF9 413 aa20.03■□□□□ 0.8
HLA-A-202ENST00000376806 ARHGEF1Q92888 912 aaKnown RBP20.03■□□□□ 0.8
HLA-A-202ENST00000376806 TCEANC2Q96MN5 208 aa20.03■□□□□ 0.8
HLA-A-202ENST00000376806 SETDB2Q96T68 719 aa20.03■□□□□ 0.8
HLA-A-202ENST00000376806 PIH1D3Q9NQM4 214 aaKnown RBP20.03■□□□□ 0.8
HLA-A-202ENST00000376806 TPCN1Q9ULQ1 816 aa20.03■□□□□ 0.8
HLA-A-202ENST00000376806 SNAP23O00161 211 aa20.02■□□□□ 0.8
HLA-A-202ENST00000376806 GTF2E1P29083 439 aaPredicted RBP20.02■□□□□ 0.8
HLA-A-202ENST00000376806 ADD2P35612 726 aa20.02■□□□□ 0.8
HLA-A-202ENST00000376806 EN1Q05925 392 aaPredicted RBP20.02■□□□□ 0.8
HLA-A-202ENST00000376806 TXNRD1Q16881 649 aa20.02■□□□□ 0.8
HLA-A-202ENST00000376806 MCTP1Q6DN14 999 aa20.02■□□□□ 0.8
HLA-A-202ENST00000376806 STOX1Q6ZVD7 989 aa20.02■□□□□ 0.8
HLA-A-202ENST00000376806 ANKRD18AQ8IVF6 992 aa20.02■□□□□ 0.8
HLA-A-202ENST00000376806 SKOR2Q2VWA4 1001 aaPredicted RBP20.01■□□□□ 0.79
HLA-A-202ENST00000376806 DEFB132Q7Z7B7 95 aa20.01■□□□□ 0.79
HLA-A-202ENST00000376806 NBPF5PQ86XG9 351 aaPredicted RBP20.01■□□□□ 0.79
HLA-A-202ENST00000376806 SMC3Q9UQE7 1217 aa20.01■□□□□ 0.79
HLA-A-202ENST00000376806 PUS7LQ9H0K6 701 aaKnown RBP20.01■□□□□ 0.79
HLA-A-202ENST00000376806 WDR33Q9C0J8 1336 aaKnown RBP20■□□□□ 0.79
HLA-A-202ENST00000376806 FOXP2O15409 715 aa20■□□□□ 0.79
HLA-A-202ENST00000376806 RASGRF1Q13972 1273 aa20■□□□□ 0.79
HLA-A-202ENST00000376806 FOXD4L5Q5VV16 416 aaPredicted RBP20■□□□□ 0.79
HLA-A-202ENST00000376806 SPATA5Q8NB90 893 aa20■□□□□ 0.79
HLA-A-202ENST00000376806 FOXD4L4Q8WXT5 416 aaPredicted RBP20■□□□□ 0.79
HLA-A-202ENST00000376806 CHD4Q14839 1912 aa20■□□□□ 0.79
HLA-A-202ENST00000376806 TCHHQ07283 1943 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms