RNA–Protein interactions for RNA: ENST00000376751.7

RNF39-202, Transcript of ring finger protein 39, humanhuman

TSL 1 (best) BASIC

Gene RNF39, Length 1,970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-202ENST00000376751 PIP4K2BP78356 416 aa25.78■■□□□ 1.72
RNF39-202ENST00000376751 SUSD4Q5VX71 490 aa25.78■■□□□ 1.72
RNF39-202ENST00000376751 BARGINQ6ZT62 677 aa25.78■■□□□ 1.72
RNF39-202ENST00000376751 RBSNQ9H1K0 784 aa25.78■■□□□ 1.72
RNF39-202ENST00000376751 MYO5AQ9Y4I1 1855 aaKnown RBP25.78■■□□□ 1.72
RNF39-202ENST00000376751 DDX60Q8IY21 1712 aaKnown RBP25.78■■□□□ 1.72
RNF39-202ENST00000376751 MCAMP43121 646 aa25.78■■□□□ 1.72
RNF39-202ENST00000376751 NASPP49321 788 aaPredicted RBP25.78■■□□□ 1.72
RNF39-202ENST00000376751 ARAP2Q8WZ64 1704 aa25.77■■□□□ 1.72
RNF39-202ENST00000376751 CAMTA2O94983 1202 aa25.77■■□□□ 1.72
RNF39-202ENST00000376751 FAM43AQ8N2R8 423 aa25.77■■□□□ 1.72
RNF39-202ENST00000376751 GTF3C6Q969F1 213 aa25.77■■□□□ 1.72
RNF39-202ENST00000376751 HCLS1P14317 486 aaPredicted RBP25.76■■□□□ 1.72
RNF39-202ENST00000376751 TTLL5Q6EMB2 1281 aa25.76■■□□□ 1.72
RNF39-202ENST00000376751 CDC37L1Q7L3B6 337 aa25.76■■□□□ 1.72
RNF39-202ENST00000376751 COL5A3P25940 1745 aaPredicted RBP25.76■■□□□ 1.71
RNF39-202ENST00000376751 LARP1BQ659C4 914 aaKnown RBP25.76■■□□□ 1.71
RNF39-202ENST00000376751 LRSAM1Q6UWE0 723 aa25.76■■□□□ 1.71
RNF39-202ENST00000376751 FAM177BA6PVY3 158 aa25.75■■□□□ 1.71
RNF39-202ENST00000376751 FIBPO43427 364 aa25.75■■□□□ 1.71
RNF39-202ENST00000376751 KCNQ2O43526 872 aa25.75■■□□□ 1.71
RNF39-202ENST00000376751 DNM1Q05193 864 aaKnown RBP25.75■■□□□ 1.71
RNF39-202ENST00000376751 BRF1Q92994 677 aa25.75■■□□□ 1.71
RNF39-202ENST00000376751 ATP6V1DQ9Y5K8 247 aa25.75■■□□□ 1.71
RNF39-202ENST00000376751 E7EWF7 191 aa25.75■■□□□ 1.71
RNF39-202ENST00000376751 WASHC4Q2M389 1173 aa25.75■■□□□ 1.71
RNF39-202ENST00000376751 JAK2O60674 1132 aa25.74■■□□□ 1.71
RNF39-202ENST00000376751 PDE8BO95263 885 aa25.74■■□□□ 1.71
RNF39-202ENST00000376751 ZFYP08048 801 aaPredicted RBP25.74■■□□□ 1.71
RNF39-202ENST00000376751 DHX32Q7L7V1 743 aaKnown RBP25.74■■□□□ 1.71
RNF39-202ENST00000376751 LAMB2P55268 1798 aa25.74■■□□□ 1.71
RNF39-202ENST00000376751 EXOSC10Q01780 885 aaKnown RBP25.73■■□□□ 1.71
RNF39-202ENST00000376751 HMGB1P09429 215 aaKnown RBP25.73■■□□□ 1.71
RNF39-202ENST00000376751 HSP90B1P14625 803 aaKnown RBP25.73■■□□□ 1.71
RNF39-202ENST00000376751 LRRFIP1Q32MZ4 808 aaKnown RBP25.73■■□□□ 1.71
RNF39-202ENST00000376751 APPBP2Q92624 585 aa25.73■■□□□ 1.71
RNF39-202ENST00000376751 PUS7LQ9H0K6 701 aaKnown RBP25.73■■□□□ 1.71
RNF39-202ENST00000376751 RRAGDQ9NQL2 400 aaPredicted RBP25.73■■□□□ 1.71
RNF39-202ENST00000376751 BCORQ6W2J9 1755 aa25.72■■□□□ 1.71
RNF39-202ENST00000376751 HELBQ8NG08 1087 aaPredicted RBP25.72■■□□□ 1.71
RNF39-202ENST00000376751 ZNF512BQ96KM6 892 aaPredicted RBP25.72■■□□□ 1.71
RNF39-202ENST00000376751 AK7Q96M32 723 aa25.72■■□□□ 1.71
RNF39-202ENST00000376751 UTP14AQ9BVJ6 771 aaKnown RBP25.72■■□□□ 1.71
RNF39-202ENST00000376751 PHKA1P46020 1223 aa25.71■■□□□ 1.71
RNF39-202ENST00000376751 FERMT3Q86UX7 667 aa25.71■■□□□ 1.71
RNF39-202ENST00000376751 PDCP20941 246 aa25.71■■□□□ 1.71
RNF39-202ENST00000376751 FGFR2P21802 821 aa25.71■■□□□ 1.71
RNF39-202ENST00000376751 PIH1D3Q9NQM4 214 aaKnown RBP25.71■■□□□ 1.71
RNF39-202ENST00000376751 UBE2HP62256 183 aa25.7■■□□□ 1.7
RNF39-202ENST00000376751 SCRN1Q12765 414 aa25.7■■□□□ 1.7
RNF39-202ENST00000376751 AGXT2Q9BYV1 514 aa25.7■■□□□ 1.7
RNF39-202ENST00000376751 SEC31BQ9NQW1 1179 aa25.7■■□□□ 1.7
RNF39-202ENST00000376751 NTSR2O95665 410 aa25.69■■□□□ 1.7
RNF39-202ENST00000376751 APOBRQ0VD83 1088 aa25.69■■□□□ 1.7
RNF39-202ENST00000376751 CCDC102BQ68D86 513 aa25.69■■□□□ 1.7
RNF39-202ENST00000376751 SYAP1Q96A49 352 aaPredicted RBP25.69■■□□□ 1.7
RNF39-202ENST00000376751 PFKFB2O60825 505 aa25.69■■□□□ 1.7
RNF39-202ENST00000376751 ARID4AP29374 1257 aaPredicted RBP25.69■■□□□ 1.7
RNF39-202ENST00000376751 PUM3Q15397 648 aaKnown RBP25.69■■□□□ 1.7
RNF39-202ENST00000376751 FAM98CQ17RN3 349 aaKnown RBP25.69■■□□□ 1.7
RNF39-202ENST00000376751 TPRNQ4KMQ1 711 aa25.69■■□□□ 1.7
RNF39-202ENST00000376751 MROH5Q6ZUA9 1318 aa25.69■■□□□ 1.7
RNF39-202ENST00000376751 COL4A1P02462 1669 aa25.69■■□□□ 1.7
RNF39-202ENST00000376751 FGD1P98174 961 aa25.68■■□□□ 1.7
RNF39-202ENST00000376751 PARP10Q53GL7 1025 aa25.68■■□□□ 1.7
RNF39-202ENST00000376751 FAM173BQ6P4H8 233 aa25.68■■□□□ 1.7
RNF39-202ENST00000376751 GPAA1O43292 621 aa25.67■■□□□ 1.7
RNF39-202ENST00000376751 TOM1O60784 492 aa25.67■■□□□ 1.7
RNF39-202ENST00000376751 ADD2P35612 726 aa25.67■■□□□ 1.7
RNF39-202ENST00000376751 HAND2P61296 217 aa25.67■■□□□ 1.7
RNF39-202ENST00000376751 CHST3Q7LGC8 479 aa25.67■■□□□ 1.7
RNF39-202ENST00000376751 PPP1R9BQ96SB3 815 aa25.67■■□□□ 1.7
RNF39-202ENST00000376751 NIP7Q9Y221 180 aaKnown RBP eCLIP25.67■■□□□ 1.7
RNF39-202ENST00000376751 ZNF831Q5JPB2 1677 aa25.67■■□□□ 1.7
RNF39-202ENST00000376751 ATRNO75882 1429 aa25.67■■□□□ 1.7
RNF39-202ENST00000376751 SNAP23O00161 211 aa25.67■■□□□ 1.7
RNF39-202ENST00000376751 SMARCC1Q92922 1105 aaPredicted RBP25.67■■□□□ 1.7
RNF39-202ENST00000376751 FGAP02671 866 aa25.66■■□□□ 1.7
RNF39-202ENST00000376751 PDIA4P13667 645 aaKnown RBP25.66■■□□□ 1.7
RNF39-202ENST00000376751 CCDC173Q0VFZ6 552 aa25.66■■□□□ 1.7
RNF39-202ENST00000376751 LPIN2Q92539 896 aa25.66■■□□□ 1.7
RNF39-202ENST00000376751 BCL9LQ86UU0 1499 aa25.66■■□□□ 1.7
RNF39-202ENST00000376751 LINC00116Q8NCU8 138 aa25.65■■□□□ 1.7
RNF39-202ENST00000376751 SMARCC2Q8TAQ2 1214 aa25.65■■□□□ 1.7
RNF39-202ENST00000376751 DDX11Q96FC9 970 aa25.65■■□□□ 1.7
RNF39-202ENST00000376751 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.65■■□□□ 1.7
RNF39-202ENST00000376751 CTNNA3Q9UI47 895 aa25.65■■□□□ 1.7
RNF39-202ENST00000376751 CTDNEP1O95476 244 aa25.65■■□□□ 1.7
RNF39-202ENST00000376751 DOCK2Q92608 1830 aa25.64■■□□□ 1.7
RNF39-202ENST00000376751 CCDC183Q5T5S1 534 aa25.64■■□□□ 1.7
RNF39-202ENST00000376751 SLC9C2Q5TAH2 1124 aa25.64■■□□□ 1.7
RNF39-202ENST00000376751 NSUN7Q8NE18 718 aaKnown RBP25.64■■□□□ 1.7
RNF39-202ENST00000376751 TTC6Q86TZ1 520 aa25.64■■□□□ 1.69
RNF39-202ENST00000376751 TSPY26PQ9H489 355 aa25.64■■□□□ 1.69
RNF39-202ENST00000376751 GPHNQ9NQX3 736 aaPredicted RBP25.64■■□□□ 1.69
RNF39-202ENST00000376751 CASZ1Q86V15 1759 aa25.63■■□□□ 1.69
RNF39-202ENST00000376751 RTL9Q8NET4 1388 aa25.63■■□□□ 1.69
RNF39-202ENST00000376751 UQCRFS1P1P0C7P4 283 aa25.63■■□□□ 1.69
RNF39-202ENST00000376751 KCNQ4P56696 695 aa25.63■■□□□ 1.69
RNF39-202ENST00000376751 TTF1Q15361 905 aaPredicted RBP25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms