RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 NSUN7Q8NE18 718 aaKnown RBP11.43□□□□□ -0.58
TRIM39-202ENST00000376659 RIPOR2Q9Y4F9 1068 aa11.43□□□□□ -0.58
TRIM39-202ENST00000376659 ADORA1P30542 326 aa11.43□□□□□ -0.58
TRIM39-202ENST00000376659 UBN2Q6ZU65 1347 aa11.42□□□□□ -0.58
TRIM39-202ENST00000376659 A0A1B0GUL7 405 aa11.42□□□□□ -0.58
TRIM39-202ENST00000376659 OSBP2Q969R2 916 aa11.42□□□□□ -0.58
TRIM39-202ENST00000376659 ASAP1Q9ULH1 1129 aa11.42□□□□□ -0.58
TRIM39-202ENST00000376659 BTAF1O14981 1849 aa11.42□□□□□ -0.58
TRIM39-202ENST00000376659 MYH6P13533 1939 aa11.42□□□□□ -0.58
TRIM39-202ENST00000376659 MAP3K15Q6ZN16 1313 aa11.42□□□□□ -0.58
TRIM39-202ENST00000376659 CYP19A1P11511 503 aaPredicted RBP11.42□□□□□ -0.58
TRIM39-202ENST00000376659 TIMM10P62072 90 aa11.42□□□□□ -0.58
TRIM39-202ENST00000376659 KRT32Q14532 448 aa11.42□□□□□ -0.58
TRIM39-202ENST00000376659 Q6ZUG5 572 aa11.42□□□□□ -0.58
TRIM39-202ENST00000376659 NEK1Q96PY6 1258 aa11.42□□□□□ -0.58
TRIM39-202ENST00000376659 PRDM11Q9NQV5 511 aa11.42□□□□□ -0.58
TRIM39-202ENST00000376659 LIG1P18858 919 aa11.42□□□□□ -0.58
TRIM39-202ENST00000376659 MCM5P33992 734 aa11.42□□□□□ -0.58
TRIM39-202ENST00000376659 ZBTB38Q8NAP3 1195 aaPredicted RBP11.42□□□□□ -0.58
TRIM39-202ENST00000376659 TCRBV5S4A2TA0A5A2 114 aa11.41□□□□□ -0.58
TRIM39-202ENST00000376659 NCLP19338 710 aaKnown RBP11.41□□□□□ -0.58
TRIM39-202ENST00000376659 HLFQ16534 295 aa11.41□□□□□ -0.58
TRIM39-202ENST00000376659 TOM1L2Q6ZVM7 507 aa11.41□□□□□ -0.58
TRIM39-202ENST00000376659 LLPHQ9BRT6 129 aaKnown RBP11.41□□□□□ -0.58
TRIM39-202ENST00000376659 ZBTB3Q9H5J0 574 aa11.41□□□□□ -0.58
TRIM39-202ENST00000376659 DUOX1Q9NRD9 1551 aa11.41□□□□□ -0.58
TRIM39-202ENST00000376659 E7EWF7 191 aa11.41□□□□□ -0.58
TRIM39-202ENST00000376659 FDPSP14324 419 aaKnown RBP11.41□□□□□ -0.58
TRIM39-202ENST00000376659 ANTXR2P58335 489 aa11.41□□□□□ -0.58
TRIM39-202ENST00000376659 HSP90AA2PQ14568 343 aaPredicted RBP11.41□□□□□ -0.58
TRIM39-202ENST00000376659 RNF20Q5VTR2 975 aa11.41□□□□□ -0.58
TRIM39-202ENST00000376659 HPS5Q9UPZ3 1129 aa11.41□□□□□ -0.58
TRIM39-202ENST00000376659 MRVI1Q9Y6F6 885 aa11.41□□□□□ -0.58
TRIM39-202ENST00000376659 COL1A1P02452 1464 aaPredicted RBP11.41□□□□□ -0.58
TRIM39-202ENST00000376659 FAM173BQ6P4H8 233 aa11.4□□□□□ -0.58
TRIM39-202ENST00000376659 FAM184AQ8NB25 1140 aa11.4□□□□□ -0.58
TRIM39-202ENST00000376659 LEO1Q8WVC0 666 aaPredicted RBP11.4□□□□□ -0.58
TRIM39-202ENST00000376659 TERF1P54274 439 aa11.4□□□□□ -0.58
TRIM39-202ENST00000376659 FOXD4L6Q3SYB3 417 aaPredicted RBP11.4□□□□□ -0.58
TRIM39-202ENST00000376659 FOXD4L3Q6VB84 417 aaPredicted RBP11.4□□□□□ -0.58
TRIM39-202ENST00000376659 MB21D2Q8IYB1 491 aaPredicted RBP11.4□□□□□ -0.58
TRIM39-202ENST00000376659 SYNE4Q8N205 404 aa11.4□□□□□ -0.58
TRIM39-202ENST00000376659 FOCADQ5VW36 1801 aa11.4□□□□□ -0.58
TRIM39-202ENST00000376659 GOLIM4O00461 696 aa11.4□□□□□ -0.58
TRIM39-202ENST00000376659 RNF113AO15541 343 aaKnown RBP11.4□□□□□ -0.58
TRIM39-202ENST00000376659 LETM1O95202 739 aaPredicted RBP11.4□□□□□ -0.58
TRIM39-202ENST00000376659 FGFR2P21802 821 aa11.4□□□□□ -0.58
TRIM39-202ENST00000376659 GIGYF2Q6Y7W6 1299 aaKnown RBP11.4□□□□□ -0.58
TRIM39-202ENST00000376659 NLRP10Q86W26 655 aa11.4□□□□□ -0.58
TRIM39-202ENST00000376659 KCNF1Q9H3M0 494 aa11.4□□□□□ -0.58
TRIM39-202ENST00000376659 WDR19Q8NEZ3 1342 aa11.4□□□□□ -0.59
TRIM39-202ENST00000376659 LTBP1Q14766 1721 aa11.39□□□□□ -0.59
TRIM39-202ENST00000376659 FIBPO43427 364 aa11.39□□□□□ -0.59
TRIM39-202ENST00000376659 SYAP1Q96A49 352 aaPredicted RBP11.39□□□□□ -0.59
TRIM39-202ENST00000376659 DNAJC2Q99543 621 aaKnown RBP11.39□□□□□ -0.59
TRIM39-202ENST00000376659 TACC3Q9Y6A5 838 aa11.39□□□□□ -0.59
TRIM39-202ENST00000376659 RTL9Q8NET4 1388 aa11.39□□□□□ -0.59
TRIM39-202ENST00000376659 PHF14O94880 888 aa11.39□□□□□ -0.59
TRIM39-202ENST00000376659 DNAJC10Q8IXB1 793 aa11.39□□□□□ -0.59
TRIM39-202ENST00000376659 ZMYM6O95789 1325 aa11.39□□□□□ -0.59
TRIM39-202ENST00000376659 HCLS1P14317 486 aaPredicted RBP11.39□□□□□ -0.59
TRIM39-202ENST00000376659 SNW1Q13573 536 aaKnown RBP11.39□□□□□ -0.59
TRIM39-202ENST00000376659 RGS22Q8NE09 1264 aa11.39□□□□□ -0.59
TRIM39-202ENST00000376659 TTLL11Q8NHH1 800 aa11.39□□□□□ -0.59
TRIM39-202ENST00000376659 ATP6V1DQ9Y5K8 247 aa11.39□□□□□ -0.59
TRIM39-202ENST00000376659 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.39□□□□□ -0.59
TRIM39-202ENST00000376659 ARID4AP29374 1257 aaPredicted RBP11.38□□□□□ -0.59
TRIM39-202ENST00000376659 MCAMP43121 646 aa11.38□□□□□ -0.59
TRIM39-202ENST00000376659 DHX32Q7L7V1 743 aaKnown RBP11.38□□□□□ -0.59
TRIM39-202ENST00000376659 XAGE2Q96GT9 111 aa11.38□□□□□ -0.59
TRIM39-202ENST00000376659 SPTLC3Q9NUV7 552 aa11.38□□□□□ -0.59
TRIM39-202ENST00000376659 PDIA3P30101 505 aaKnown RBP11.38□□□□□ -0.59
TRIM39-202ENST00000376659 LARP1BQ659C4 914 aaKnown RBP11.38□□□□□ -0.59
TRIM39-202ENST00000376659 NAA16Q6N069 864 aaPredicted RBP11.38□□□□□ -0.59
TRIM39-202ENST00000376659 GIMAP6Q6P9H5 292 aa11.38□□□□□ -0.59
TRIM39-202ENST00000376659 ZNF34Q8IZ26 560 aa11.38□□□□□ -0.59
TRIM39-202ENST00000376659 ZNF646O15015 1829 aaPredicted RBP11.38□□□□□ -0.59
TRIM39-202ENST00000376659 KDM4AO75164 1064 aa11.38□□□□□ -0.59
TRIM39-202ENST00000376659 RNF214Q8ND24 703 aa11.38□□□□□ -0.59
TRIM39-202ENST00000376659 ENGASEQ8NFI3 743 aa11.38□□□□□ -0.59
TRIM39-202ENST00000376659 ZNF274Q96GC6 653 aaPredicted RBP11.38□□□□□ -0.59
TRIM39-202ENST00000376659 GOLPH3LQ9H4A5 285 aa11.38□□□□□ -0.59
TRIM39-202ENST00000376659 BRF1Q92994 677 aa11.37□□□□□ -0.59
TRIM39-202ENST00000376659 PUS7LQ9H0K6 701 aaKnown RBP11.37□□□□□ -0.59
TRIM39-202ENST00000376659 CLSTN2Q9H4D0 955 aa11.37□□□□□ -0.59
TRIM39-202ENST00000376659 CCDC39Q9UFE4 941 aa11.37□□□□□ -0.59
TRIM39-202ENST00000376659 LRRC37AA6NMS7 1700 aa11.37□□□□□ -0.59
TRIM39-202ENST00000376659 BAZ2AQ9UIF9 1905 aaKnown RBP11.37□□□□□ -0.59
TRIM39-202ENST00000376659 TTLL5Q6EMB2 1281 aa11.37□□□□□ -0.59
TRIM39-202ENST00000376659 CCDC88AQ3V6T2 1871 aa11.37□□□□□ -0.59
TRIM39-202ENST00000376659 HMGB1P09429 215 aaKnown RBP11.36□□□□□ -0.59
TRIM39-202ENST00000376659 CTSWP56202 376 aa11.36□□□□□ -0.59
TRIM39-202ENST00000376659 PI16Q6UXB8 463 aa11.36□□□□□ -0.59
TRIM39-202ENST00000376659 PDCP20941 246 aa11.36□□□□□ -0.59
TRIM39-202ENST00000376659 INTS5Q6P9B9 1019 aaKnown RBP11.36□□□□□ -0.59
TRIM39-202ENST00000376659 GREM2Q9H772 168 aa11.36□□□□□ -0.59
TRIM39-202ENST00000376659 NR1I2O75469 434 aa11.36□□□□□ -0.59
TRIM39-202ENST00000376659 APOBRQ0VD83 1088 aa11.36□□□□□ -0.59
TRIM39-202ENST00000376659 PLA2G4DQ86XP0 818 aa11.36□□□□□ -0.59
TRIM39-202ENST00000376659 TMOD3Q9NYL9 352 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms