RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 MED23Q9ULK4 1368 aa16.92■□□□□ 0.3
CLCN6-205ENST00000376492 DACT2Q5SW24 774 aa16.92■□□□□ 0.3
CLCN6-205ENST00000376492 PRPF38BQ5VTL8 546 aaKnown RBP16.92■□□□□ 0.3
CLCN6-205ENST00000376492 C8orf58Q8NAV2 365 aa16.92■□□□□ 0.3
CLCN6-205ENST00000376492 FBXW7Q969H0 707 aa16.92■□□□□ 0.3
CLCN6-205ENST00000376492 METTL22Q9BUU2 404 aaPredicted RBP16.92■□□□□ 0.3
CLCN6-205ENST00000376492 HDAC9Q9UKV0 1011 aa16.92■□□□□ 0.3
CLCN6-205ENST00000376492 SASH1O94885 1247 aa16.91■□□□□ 0.3
CLCN6-205ENST00000376492 GREM2Q9H772 168 aa16.91■□□□□ 0.3
CLCN6-205ENST00000376492 IFT57Q9NWB7 429 aa16.91■□□□□ 0.3
CLCN6-205ENST00000376492 WNT10BO00744 389 aa16.9■□□□□ 0.3
CLCN6-205ENST00000376492 CDC5LQ99459 802 aaKnown RBP16.9■□□□□ 0.3
CLCN6-205ENST00000376492 MINPP1Q9UNW1 487 aa16.9■□□□□ 0.3
CLCN6-205ENST00000376492 MAP3K2Q9Y2U5 619 aa16.9■□□□□ 0.3
CLCN6-205ENST00000376492 GPR25O00155 361 aa16.89■□□□□ 0.29
CLCN6-205ENST00000376492 APAF1O14727 1248 aa16.89■□□□□ 0.29
CLCN6-205ENST00000376492 IGKV5-2P06315 115 aa16.89■□□□□ 0.29
CLCN6-205ENST00000376492 PRKG1Q13976 671 aa16.89■□□□□ 0.29
CLCN6-205ENST00000376492 PKN2Q16513 984 aaKnown RBP16.89■□□□□ 0.29
CLCN6-205ENST00000376492 TXNRD3Q86VQ6 643 aa16.89■□□□□ 0.29
CLCN6-205ENST00000376492 TTLL11Q8NHH1 800 aa16.89■□□□□ 0.29
CLCN6-205ENST00000376492 R3HDMLQ9H3Y0 253 aa16.89■□□□□ 0.29
CLCN6-205ENST00000376492 BSDC1Q9NW68 430 aaPredicted RBP16.89■□□□□ 0.29
CLCN6-205ENST00000376492 ZNF646O15015 1829 aaPredicted RBP16.89■□□□□ 0.29
CLCN6-205ENST00000376492 DDX58O95786 925 aaKnown RBP16.88■□□□□ 0.29
CLCN6-205ENST00000376492 KLRK1P26718 216 aa16.88■□□□□ 0.29
CLCN6-205ENST00000376492 TM4SF4P48230 202 aa16.88■□□□□ 0.29
CLCN6-205ENST00000376492 CCT4P50991 539 aaKnown RBP16.88■□□□□ 0.29
CLCN6-205ENST00000376492 GNAI1P63096 354 aa16.88■□□□□ 0.29
CLCN6-205ENST00000376492 PTPN12Q05209 780 aaKnown RBP16.88■□□□□ 0.29
CLCN6-205ENST00000376492 OGFOD1Q8N543 542 aa16.88■□□□□ 0.29
CLCN6-205ENST00000376492 CWF19L2Q2TBE0 894 aaKnown RBP16.87■□□□□ 0.29
CLCN6-205ENST00000376492 STRIP1Q5VSL9 837 aa16.87■□□□□ 0.29
CLCN6-205ENST00000376492 TSPYL6Q8N831 410 aa16.87■□□□□ 0.29
CLCN6-205ENST00000376492 MRS2Q9HD23 443 aa16.87■□□□□ 0.29
CLCN6-205ENST00000376492 FZD1Q9UP38 647 aa16.87■□□□□ 0.29
CLCN6-205ENST00000376492 PI4KAP2A4QPH2 592 aa16.86■□□□□ 0.29
CLCN6-205ENST00000376492 NF2P35240 595 aa16.86■□□□□ 0.29
CLCN6-205ENST00000376492 CCDC30Q5VVM6 783 aa16.86■□□□□ 0.29
CLCN6-205ENST00000376492 FBXO46Q6PJ61 603 aaPredicted RBP16.86■□□□□ 0.29
CLCN6-205ENST00000376492 KIAA0825Q8IV33 1275 aa16.86■□□□□ 0.29
CLCN6-205ENST00000376492 PI4KAP1Q8N8J0 262 aa16.86■□□□□ 0.29
CLCN6-205ENST00000376492 COA1Q9GZY4 146 aa16.86■□□□□ 0.29
CLCN6-205ENST00000376492 MYO3BQ8WXR4 1341 aa16.86■□□□□ 0.29
CLCN6-205ENST00000376492 SPEF2Q9C093 1822 aa16.86■□□□□ 0.29
CLCN6-205ENST00000376492 HTTP42858 3142 aa16.85■□□□□ 0.29
CLCN6-205ENST00000376492 SREBF2Q12772 1141 aa16.85■□□□□ 0.29
CLCN6-205ENST00000376492 NOM1Q5C9Z4 860 aaKnown RBP16.85■□□□□ 0.29
CLCN6-205ENST00000376492 KSR2Q6VAB6 950 aa16.85■□□□□ 0.29
CLCN6-205ENST00000376492 FKTNO75072 461 aa16.84■□□□□ 0.29
CLCN6-205ENST00000376492 CALD1Q05682 793 aaKnown RBP16.84■□□□□ 0.29
CLCN6-205ENST00000376492 ARMC9Q7Z3E5 817 aa16.84■□□□□ 0.29
CLCN6-205ENST00000376492 UBE3BQ7Z3V4 1068 aa16.84■□□□□ 0.29
CLCN6-205ENST00000376492 ZBED3Q96IU2 234 aaPredicted RBP16.84■□□□□ 0.29
CLCN6-205ENST00000376492 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.84■□□□□ 0.29
CLCN6-205ENST00000376492 ZNF804BA4D1E1 1349 aa16.83■□□□□ 0.28
CLCN6-205ENST00000376492 NEURL1BA8MQ27 555 aa16.83■□□□□ 0.28
CLCN6-205ENST00000376492 LDLRAD1Q5T700 205 aa16.83■□□□□ 0.28
CLCN6-205ENST00000376492 SPRYD7Q5W111 196 aa16.83■□□□□ 0.28
CLCN6-205ENST00000376492 TTLL5Q6EMB2 1281 aa16.83■□□□□ 0.28
CLCN6-205ENST00000376492 APOBEC3FQ8IUX4 373 aaKnown RBP16.83■□□□□ 0.28
CLCN6-205ENST00000376492 CFHR5Q9BXR6 569 aa16.83■□□□□ 0.28
CLCN6-205ENST00000376492 ANGEL1Q9UNK9 670 aaKnown RBP16.83■□□□□ 0.28
CLCN6-205ENST00000376492 SSC5DA1L4H1 1573 aa16.82■□□□□ 0.28
CLCN6-205ENST00000376492 IGHMBP2P38935 993 aaKnown RBP16.82■□□□□ 0.28
CLCN6-205ENST00000376492 GTF2IP78347 998 aa16.82■□□□□ 0.28
CLCN6-205ENST00000376492 NEXNQ0ZGT2 675 aa16.82■□□□□ 0.28
CLCN6-205ENST00000376492 TSR2Q969E8 191 aaKnown RBP16.82■□□□□ 0.28
CLCN6-205ENST00000376492 LEMD3Q9Y2U8 911 aa16.82■□□□□ 0.28
CLCN6-205ENST00000376492 MKI67P46013 3256 aaKnown RBP16.81■□□□□ 0.28
CLCN6-205ENST00000376492 H7C1W4 665 aa16.81■□□□□ 0.28
CLCN6-205ENST00000376492 ITGA6P23229 1130 aa16.81■□□□□ 0.28
CLCN6-205ENST00000376492 G2E3Q7L622 706 aa16.81■□□□□ 0.28
CLCN6-205ENST00000376492 CLMNQ96JQ2 1002 aa16.81■□□□□ 0.28
CLCN6-205ENST00000376492 PCDHAC2Q9Y5I4 1007 aa16.81■□□□□ 0.28
CLCN6-205ENST00000376492 SNAP23O00161 211 aa16.8■□□□□ 0.28
CLCN6-205ENST00000376492 CERS5Q8N5B7 392 aa16.8■□□□□ 0.28
CLCN6-205ENST00000376492 DEFB129Q9H1M3 183 aa16.8■□□□□ 0.28
CLCN6-205ENST00000376492 KCNJ4P48050 445 aa16.79■□□□□ 0.28
CLCN6-205ENST00000376492 CHRNDQ07001 517 aa16.79■□□□□ 0.28
CLCN6-205ENST00000376492 NCBP3Q53F19 620 aaKnown RBP16.79■□□□□ 0.28
CLCN6-205ENST00000376492 IFNL1Q8IU54 200 aa16.79■□□□□ 0.28
CLCN6-205ENST00000376492 MPHOSPH8Q99549 860 aa16.79■□□□□ 0.28
CLCN6-205ENST00000376492 ANKRD2Q9GZV1 360 aa16.79■□□□□ 0.28
CLCN6-205ENST00000376492 TRIM17Q9Y577 477 aa16.79■□□□□ 0.28
CLCN6-205ENST00000376492 COL1A1P02452 1464 aaPredicted RBP16.79■□□□□ 0.28
CLCN6-205ENST00000376492 MYH3P11055 1940 aa16.78■□□□□ 0.28
CLCN6-205ENST00000376492 AOX1Q06278 1338 aa16.78■□□□□ 0.28
CLCN6-205ENST00000376492 IRS2Q9Y4H2 1338 aa16.78■□□□□ 0.28
CLCN6-205ENST00000376492 CLRN2A0PK11 232 aa16.78■□□□□ 0.28
CLCN6-205ENST00000376492 IGF2BP3O00425 579 aaKnown RBP eCLIP16.78■□□□□ 0.28
CLCN6-205ENST00000376492 MMP14P50281 582 aa16.78■□□□□ 0.28
CLCN6-205ENST00000376492 CASP7P55210 303 aa16.78■□□□□ 0.28
CLCN6-205ENST00000376492 GCKRQ14397 625 aa16.78■□□□□ 0.28
CLCN6-205ENST00000376492 DLGAP5Q15398 846 aa16.78■□□□□ 0.28
CLCN6-205ENST00000376492 WNK4Q96J92 1243 aa16.78■□□□□ 0.28
CLCN6-205ENST00000376492 STK31Q9BXU1 1019 aa16.78■□□□□ 0.28
CLCN6-205ENST00000376492 CD209Q9NNX6 404 aa16.78■□□□□ 0.28
CLCN6-205ENST00000376492 CENPFP49454 3210 aa16.77■□□□□ 0.28
CLCN6-205ENST00000376492 BRCA2P51587 3418 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms