RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 CDC37Q16543 378 aaPredicted RBP10.65□□□□□ -0.7
UBR4-201ENST00000375218 CCDC73Q6ZRK6 1079 aa10.65□□□□□ -0.7
UBR4-201ENST00000375218 RNF123Q5XPI4 1314 aa10.65□□□□□ -0.7
UBR4-201ENST00000375218 SKILP12757 684 aa10.65□□□□□ -0.71
UBR4-201ENST00000375218 CDC27P30260 824 aa10.65□□□□□ -0.71
UBR4-201ENST00000375218 MAPRE1Q15691 268 aaKnown RBP10.65□□□□□ -0.71
UBR4-201ENST00000375218 PHLDB3Q6NSJ2 640 aa10.65□□□□□ -0.71
UBR4-201ENST00000375218 TAX1BP1Q86VP1 789 aa10.65□□□□□ -0.71
UBR4-201ENST00000375218 STK32AQ8WU08 396 aa10.65□□□□□ -0.71
UBR4-201ENST00000375218 XPO4Q9C0E2 1151 aaKnown RBP10.65□□□□□ -0.71
UBR4-201ENST00000375218 CASS4Q9NQ75 786 aa10.65□□□□□ -0.71
UBR4-201ENST00000375218 DAAM1Q9Y4D1 1078 aa10.65□□□□□ -0.71
UBR4-201ENST00000375218 PALM3A6NDB9 673 aaPredicted RBP10.64□□□□□ -0.71
UBR4-201ENST00000375218 TSPY2A6NKD2 308 aa10.64□□□□□ -0.71
UBR4-201ENST00000375218 TSPY3P0CV98 308 aa10.64□□□□□ -0.71
UBR4-201ENST00000375218 TSPY8P0CW00 308 aa10.64□□□□□ -0.71
UBR4-201ENST00000375218 ZNF132P52740 706 aa10.64□□□□□ -0.71
UBR4-201ENST00000375218 TSPY1Q01534 308 aa10.64□□□□□ -0.71
UBR4-201ENST00000375218 OSBPL2Q9H1P3 480 aa10.64□□□□□ -0.71
UBR4-201ENST00000375218 ALS2Q96Q42 1657 aa10.64□□□□□ -0.71
UBR4-201ENST00000375218 OAS2P29728 719 aaKnown RBP10.64□□□□□ -0.71
UBR4-201ENST00000375218 DMTNQ08495 405 aa10.64□□□□□ -0.71
UBR4-201ENST00000375218 ZNF746Q6NUN9 644 aaPredicted RBP10.64□□□□□ -0.71
UBR4-201ENST00000375218 PODNQ7Z5L7 613 aa10.64□□□□□ -0.71
UBR4-201ENST00000375218 JARID2Q92833 1246 aaPredicted RBP10.64□□□□□ -0.71
UBR4-201ENST00000375218 POLG2Q9UHN1 485 aa10.64□□□□□ -0.71
UBR4-201ENST00000375218 SHTN1A0MZ66 631 aa10.64□□□□□ -0.71
UBR4-201ENST00000375218 CDHR1Q96JP9 859 aa10.64□□□□□ -0.71
UBR4-201ENST00000375218 CCSER2Q9H7U1 834 aa10.64□□□□□ -0.71
UBR4-201ENST00000375218 SMTNL1A8MU46 457 aa10.63□□□□□ -0.71
UBR4-201ENST00000375218 MCM10Q7L590 875 aa10.63□□□□□ -0.71
UBR4-201ENST00000375218 MTMR14Q8NCE2 650 aa10.63□□□□□ -0.71
UBR4-201ENST00000375218 ZRANB1Q9UGI0 708 aa10.63□□□□□ -0.71
UBR4-201ENST00000375218 MRPS23Q9Y3D9 190 aaKnown RBP10.63□□□□□ -0.71
UBR4-201ENST00000375218 COL18A1P39060 1754 aa10.63□□□□□ -0.71
UBR4-201ENST00000375218 DDB1Q16531 1140 aa10.63□□□□□ -0.71
UBR4-201ENST00000375218 DZIP3Q86Y13 1208 aaKnown RBP10.63□□□□□ -0.71
UBR4-201ENST00000375218 SVIPQ8NHG7 77 aa10.63□□□□□ -0.71
UBR4-201ENST00000375218 SNX21Q969T3 373 aa10.63□□□□□ -0.71
UBR4-201ENST00000375218 CLIC5Q9NZA1 410 aa10.63□□□□□ -0.71
UBR4-201ENST00000375218 IKBKGQ9Y6K9 419 aa10.63□□□□□ -0.71
UBR4-201ENST00000375218 NPC1L1Q9UHC9 1359 aa10.63□□□□□ -0.71
UBR4-201ENST00000375218 INMTO95050 263 aa10.62□□□□□ -0.71
UBR4-201ENST00000375218 EIF5P55010 431 aaKnown RBP10.62□□□□□ -0.71
UBR4-201ENST00000375218 MAP2K5Q13163 448 aa10.62□□□□□ -0.71
UBR4-201ENST00000375218 TMEM87BQ96K49 555 aa10.62□□□□□ -0.71
UBR4-201ENST00000375218 V9GYY5 206 aaPredicted RBP10.62□□□□□ -0.71
UBR4-201ENST00000375218 TNRQ92752 1358 aa10.62□□□□□ -0.71
UBR4-201ENST00000375218 PHRF1Q9P1Y6 1649 aaKnown RBP10.62□□□□□ -0.71
UBR4-201ENST00000375218 LMTK3Q96Q04 1460 aa10.62□□□□□ -0.71
UBR4-201ENST00000375218 ABCC11Q96J66 1382 aa10.62□□□□□ -0.71
UBR4-201ENST00000375218 PPM1FP49593 454 aaPredicted RBP10.62□□□□□ -0.71
UBR4-201ENST00000375218 LLGL2Q6P1M3 1020 aa10.62□□□□□ -0.71
UBR4-201ENST00000375218 IPCEF1Q8WWN9 437 aaPredicted RBP10.62□□□□□ -0.71
UBR4-201ENST00000375218 TBK1Q9UHD2 729 aa10.62□□□□□ -0.71
UBR4-201ENST00000375218 CCP110O43303 1012 aa10.62□□□□□ -0.71
UBR4-201ENST00000375218 HSD3B2P26439 372 aa10.62□□□□□ -0.71
UBR4-201ENST00000375218 COL19A1Q14993 1142 aa10.62□□□□□ -0.71
UBR4-201ENST00000375218 LRCH2Q5VUJ6 765 aa10.62□□□□□ -0.71
UBR4-201ENST00000375218 KDM4FA0A1W2PPD8 638 aa10.62□□□□□ -0.71
UBR4-201ENST00000375218 BOLA2-SMG1P6H3BVE0 249 aa10.62□□□□□ -0.71
UBR4-201ENST00000375218 ESCO1Q5FWF5 840 aa10.62□□□□□ -0.71
UBR4-201ENST00000375218 ANO1Q5XXA6 986 aa10.62□□□□□ -0.71
UBR4-201ENST00000375218 C14orf80Q86SX3 495 aa10.62□□□□□ -0.71
UBR4-201ENST00000375218 FEZ1Q99689 392 aa10.62□□□□□ -0.71
UBR4-201ENST00000375218 ABCA3Q99758 1704 aa10.61□□□□□ -0.71
UBR4-201ENST00000375218 PPP2R5CQ13362 524 aa10.61□□□□□ -0.71
UBR4-201ENST00000375218 PPP2R5AQ15172 486 aa10.61□□□□□ -0.71
UBR4-201ENST00000375218 ZNF449Q6P9G9 518 aa10.61□□□□□ -0.71
UBR4-201ENST00000375218 RWDD1Q9H446 243 aaPredicted RBP10.61□□□□□ -0.71
UBR4-201ENST00000375218 MEX3CQ5U5Q3 659 aaKnown RBP10.61□□□□□ -0.71
UBR4-201ENST00000375218 SMG6Q86US8 1419 aaKnown RBP10.61□□□□□ -0.71
UBR4-201ENST00000375218 PLEKHG1Q9ULL1 1385 aa10.61□□□□□ -0.71
UBR4-201ENST00000375218 SNX16P57768 344 aa10.61□□□□□ -0.71
UBR4-201ENST00000375218 TAF11Q15544 211 aa10.61□□□□□ -0.71
UBR4-201ENST00000375218 SAMD14Q8IZD0 417 aaPredicted RBP10.61□□□□□ -0.71
UBR4-201ENST00000375218 TMEM87AQ8NBN3 555 aa10.61□□□□□ -0.71
UBR4-201ENST00000375218 CABP2Q9NPB3 220 aa10.61□□□□□ -0.71
UBR4-201ENST00000375218 SUN2Q9UH99 717 aa10.61□□□□□ -0.71
UBR4-201ENST00000375218 ZNF232Q9UNY5 417 aa10.61□□□□□ -0.71
UBR4-201ENST00000375218 SHANK3Q9BYB0 1731 aa10.6□□□□□ -0.71
UBR4-201ENST00000375218 ARHGEF25Q86VW2 580 aa10.6□□□□□ -0.71
UBR4-201ENST00000375218 GPR101Q96P66 508 aaPredicted RBP10.6□□□□□ -0.71
UBR4-201ENST00000375218 CAMTA1Q9Y6Y1 1673 aa10.6□□□□□ -0.71
UBR4-201ENST00000375218 NSD3Q9BZ95 1437 aa10.6□□□□□ -0.71
UBR4-201ENST00000375218 NUCB1Q02818 461 aa10.6□□□□□ -0.71
UBR4-201ENST00000375218 PDXDC1Q6P996 788 aa10.6□□□□□ -0.71
UBR4-201ENST00000375218 DHX36Q9H2U1 1008 aaKnown RBP10.6□□□□□ -0.71
UBR4-201ENST00000375218 ZNF652Q9Y2D9 606 aa10.6□□□□□ -0.71
UBR4-201ENST00000375218 LMO7Q8WWI1 1683 aa10.6□□□□□ -0.71
UBR4-201ENST00000375218 LRRC7Q96NW7 1537 aa10.6□□□□□ -0.71
UBR4-201ENST00000375218 AMHR2Q16671 573 aa10.6□□□□□ -0.71
UBR4-201ENST00000375218 GRAMD1BQ3KR37 738 aa10.6□□□□□ -0.71
UBR4-201ENST00000375218 TRIM11Q96F44 468 aa10.6□□□□□ -0.71
UBR4-201ENST00000375218 IWS1Q96ST2 819 aa10.6□□□□□ -0.71
UBR4-201ENST00000375218 TFIP11Q9UBB9 837 aaKnown RBP10.6□□□□□ -0.71
UBR4-201ENST00000375218 MAGED1Q9Y5V3 778 aaPredicted RBP10.6□□□□□ -0.71
UBR4-201ENST00000375218 ANKRD13DQ6ZTN6 518 aa10.59□□□□□ -0.71
UBR4-201ENST00000375218 ZFPM2Q8WW38 1151 aa10.59□□□□□ -0.71
UBR4-201ENST00000375218 SMC4Q9NTJ3 1288 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms