RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 RBM17Q96I25 401 aaKnown RBP21.58■■□□□ 1.05
PFDN6-201ENST00000374606 PUS3Q9BZE2 481 aaKnown RBP21.58■■□□□ 1.05
PFDN6-201ENST00000374606 LNPKQ9C0E8 428 aa21.58■■□□□ 1.05
PFDN6-201ENST00000374606 CNNM1Q9NRU3 951 aa21.58■■□□□ 1.05
PFDN6-201ENST00000374606 SMARCA5O60264 1052 aaPredicted RBP21.57■■□□□ 1.04
PFDN6-201ENST00000374606 DEFB115Q30KQ5 88 aa21.57■■□□□ 1.04
PFDN6-201ENST00000374606 LRRC24Q50LG9 513 aa21.57■■□□□ 1.04
PFDN6-201ENST00000374606 ATG9AQ7Z3C6 839 aa21.57■■□□□ 1.04
PFDN6-201ENST00000374606 IARSP41252 1262 aaKnown RBP21.56■■□□□ 1.04
PFDN6-201ENST00000374606 GRAPQ13588 217 aa21.56■■□□□ 1.04
PFDN6-201ENST00000374606 CNTROBQ8N137 903 aa21.56■■□□□ 1.04
PFDN6-201ENST00000374606 GRAPLQ8TC17 118 aaPredicted RBP21.56■■□□□ 1.04
PFDN6-201ENST00000374606 CELF1Q92879 486 aaKnown RBP21.56■■□□□ 1.04
PFDN6-201ENST00000374606 A0A1B0GUL6 1792 aa21.56■■□□□ 1.04
PFDN6-201ENST00000374606 FZD9O00144 591 aa21.55■■□□□ 1.04
PFDN6-201ENST00000374606 SASH1O94885 1247 aa21.55■■□□□ 1.04
PFDN6-201ENST00000374606 HSPA8P11142 646 aaKnown RBP21.55■■□□□ 1.04
PFDN6-201ENST00000374606 MAP1SQ66K74 1059 aaPredicted RBP21.55■■□□□ 1.04
PFDN6-201ENST00000374606 OLFM4Q6UX06 510 aa21.55■■□□□ 1.04
PFDN6-201ENST00000374606 BCL11AQ9H165 835 aa21.55■■□□□ 1.04
PFDN6-201ENST00000374606 IL1RAPL2Q9NP60 686 aa21.55■■□□□ 1.04
PFDN6-201ENST00000374606 ALDH1B1P30837 517 aa21.54■■□□□ 1.04
PFDN6-201ENST00000374606 HOXA10P31260 410 aaPredicted RBP21.54■■□□□ 1.04
PFDN6-201ENST00000374606 RPS8P62241 208 aaKnown RBP21.54■■□□□ 1.04
PFDN6-201ENST00000374606 MAP2K1Q02750 393 aaPredicted RBP21.54■■□□□ 1.04
PFDN6-201ENST00000374606 GPC2Q8N158 579 aa21.54■■□□□ 1.04
PFDN6-201ENST00000374606 CLASRPQ8N2M8 674 aaKnown RBP21.54■■□□□ 1.04
PFDN6-201ENST00000374606 MROH5Q6ZUA9 1318 aa21.54■■□□□ 1.04
PFDN6-201ENST00000374606 WDR33Q9C0J8 1336 aaKnown RBP21.54■■□□□ 1.04
PFDN6-201ENST00000374606 TFCP2Q12800 502 aa21.53■■□□□ 1.04
PFDN6-201ENST00000374606 METTL24Q5JXM2 366 aa21.53■■□□□ 1.04
PFDN6-201ENST00000374606 ABHD8Q96I13 439 aa21.53■■□□□ 1.04
PFDN6-201ENST00000374606 CRAMP1Q96RY5 1269 aa21.53■■□□□ 1.04
PFDN6-201ENST00000374606 ABT1Q9ULW3 272 aaKnown RBP21.53■■□□□ 1.04
PFDN6-201ENST00000374606 RIPOR2Q9Y4F9 1068 aa21.53■■□□□ 1.04
PFDN6-201ENST00000374606 JDP2Q8WYK2 163 aa21.52■■□□□ 1.04
PFDN6-201ENST00000374606 BSDC1Q9NW68 430 aaPredicted RBP21.52■■□□□ 1.04
PFDN6-201ENST00000374606 CEP126Q9P2H0 1117 aa21.52■■□□□ 1.04
PFDN6-201ENST00000374606 ZNF609O15014 1411 aa21.52■■□□□ 1.04
PFDN6-201ENST00000374606 RGS3P49796 1198 aa21.51■■□□□ 1.03
PFDN6-201ENST00000374606 SKAP1Q86WV1 359 aa21.51■■□□□ 1.03
PFDN6-201ENST00000374606 PSMD1Q99460 953 aa21.51■■□□□ 1.03
PFDN6-201ENST00000374606 LRRC37AA6NMS7 1700 aa21.51■■□□□ 1.03
PFDN6-201ENST00000374606 PDE4AP27815 886 aa21.5■■□□□ 1.03
PFDN6-201ENST00000374606 AACSQ86V21 672 aa21.5■■□□□ 1.03
PFDN6-201ENST00000374606 GPR108Q9NPR9 543 aa21.5■■□□□ 1.03
PFDN6-201ENST00000374606 ARAP2Q8WZ64 1704 aa21.49■■□□□ 1.03
PFDN6-201ENST00000374606 SNED1Q8TER0 1413 aa21.49■■□□□ 1.03
PFDN6-201ENST00000374606 THSD7BQ9C0I4 1608 aa21.49■■□□□ 1.03
PFDN6-201ENST00000374606 LMOD1P29536 600 aaPredicted RBP21.49■■□□□ 1.03
PFDN6-201ENST00000374606 EIF6P56537 245 aaKnown RBP21.49■■□□□ 1.03
PFDN6-201ENST00000374606 TNNI3KQ59H18 835 aa21.49■■□□□ 1.03
PFDN6-201ENST00000374606 TMC4Q7Z404 712 aa21.49■■□□□ 1.03
PFDN6-201ENST00000374606 AKAP2Q9Y2D5 859 aa21.49■■□□□ 1.03
PFDN6-201ENST00000374606 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.49■■□□□ 1.03
PFDN6-201ENST00000374606 FPGT-TNNI3KV9GXZ4 949 aa21.49■■□□□ 1.03
PFDN6-201ENST00000374606 PPEF1O14829 653 aaPredicted RBP21.48■■□□□ 1.03
PFDN6-201ENST00000374606 BBOX1O75936 387 aa21.48■■□□□ 1.03
PFDN6-201ENST00000374606 SLC34A2O95436 690 aa21.48■■□□□ 1.03
PFDN6-201ENST00000374606 IFIT2P09913 472 aaKnown RBP21.48■■□□□ 1.03
PFDN6-201ENST00000374606 CHRNDQ07001 517 aa21.48■■□□□ 1.03
PFDN6-201ENST00000374606 CC2D2BQ6DHV5 1058 aa21.48■■□□□ 1.03
PFDN6-201ENST00000374606 VGLL2Q8N8G2 317 aa21.48■■□□□ 1.03
PFDN6-201ENST00000374606 GJA3Q9Y6H8 435 aa21.48■■□□□ 1.03
PFDN6-201ENST00000374606 PDE8BO95263 885 aa21.47■■□□□ 1.03
PFDN6-201ENST00000374606 EAF2Q96CJ1 260 aaPredicted RBP21.47■■□□□ 1.03
PFDN6-201ENST00000374606 MINPP1Q9UNW1 487 aa21.47■■□□□ 1.03
PFDN6-201ENST00000374606 LTBP1Q14766 1721 aa21.46■■□□□ 1.03
PFDN6-201ENST00000374606 MX1P20591 662 aa21.46■■□□□ 1.03
PFDN6-201ENST00000374606 ECE1P42892 770 aa21.46■■□□□ 1.03
PFDN6-201ENST00000374606 PUM3Q15397 648 aaKnown RBP21.46■■□□□ 1.03
PFDN6-201ENST00000374606 ATP2B3Q16720 1220 aa21.46■■□□□ 1.03
PFDN6-201ENST00000374606 HELBQ8NG08 1087 aaPredicted RBP21.46■■□□□ 1.03
PFDN6-201ENST00000374606 OTUD7AQ8TE49 926 aaPredicted RBP21.46■■□□□ 1.03
PFDN6-201ENST00000374606 GPATCH3Q96I76 525 aa21.46■■□□□ 1.03
PFDN6-201ENST00000374606 CAPNS2Q96L46 248 aa21.46■■□□□ 1.03
PFDN6-201ENST00000374606 BEGAINQ9BUH8 593 aa21.46■■□□□ 1.03
PFDN6-201ENST00000374606 ANKRD2Q9GZV1 360 aa21.46■■□□□ 1.03
PFDN6-201ENST00000374606 COL4A5P29400 1685 aa21.45■■□□□ 1.02
PFDN6-201ENST00000374606 A0A1B0GUL7 405 aa21.45■■□□□ 1.02
PFDN6-201ENST00000374606 PAXIP1Q6ZW49 1069 aaPredicted RBP21.45■■□□□ 1.02
PFDN6-201ENST00000374606 SALL3Q9BXA9 1300 aa21.45■■□□□ 1.02
PFDN6-201ENST00000374606 TAF5LO75529 589 aa21.44■■□□□ 1.02
PFDN6-201ENST00000374606 GRIPAP1Q4V328 841 aa21.44■■□□□ 1.02
PFDN6-201ENST00000374606 PLEKHM2Q8IWE5 1019 aa21.44■■□□□ 1.02
PFDN6-201ENST00000374606 CCDC8Q9H0W5 538 aaPredicted RBP21.44■■□□□ 1.02
PFDN6-201ENST00000374606 TRPM7Q96QT4 1865 aa21.43■■□□□ 1.02
PFDN6-201ENST00000374606 SCNN1DP51172 638 aa21.43■■□□□ 1.02
PFDN6-201ENST00000374606 LARGE2Q8N3Y3 721 aa21.43■■□□□ 1.02
PFDN6-201ENST00000374606 NEUROD6Q96NK8 337 aa21.43■■□□□ 1.02
PFDN6-201ENST00000374606 TLR7Q9NYK1 1049 aaKnown RBP21.43■■□□□ 1.02
PFDN6-201ENST00000374606 SLC5A1P13866 664 aa21.42■■□□□ 1.02
PFDN6-201ENST00000374606 XDHP47989 1333 aa21.42■■□□□ 1.02
PFDN6-201ENST00000374606 KCNJ4P48050 445 aa21.42■■□□□ 1.02
PFDN6-201ENST00000374606 PDE1AP54750 535 aa21.42■■□□□ 1.02
PFDN6-201ENST00000374606 AOX1Q06278 1338 aa21.42■■□□□ 1.02
PFDN6-201ENST00000374606 LPIN2Q92539 896 aa21.42■■□□□ 1.02
PFDN6-201ENST00000374606 TMX4Q9H1E5 349 aaPredicted RBP21.42■■□□□ 1.02
PFDN6-201ENST00000374606 DBNLQ9UJU6 430 aaKnown RBP21.42■■□□□ 1.02
PFDN6-201ENST00000374606 ATP6V0A2Q9Y487 856 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms