RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 GEMIN8Q9NWZ8 242 aaKnown RBP20.25■□□□□ 0.83
LDLRAP1-201ENST00000374338 FKBP4Q02790 459 aaKnown RBP eCLIP20.25■□□□□ 0.83
LDLRAP1-201ENST00000374338 CEP135Q66GS9 1140 aa20.25■□□□□ 0.83
LDLRAP1-201ENST00000374338 EVA1CP58658 441 aa20.24■□□□□ 0.83
LDLRAP1-201ENST00000374338 ELF2Q15723 593 aa20.24■□□□□ 0.83
LDLRAP1-201ENST00000374338 PI16Q6UXB8 463 aa20.24■□□□□ 0.83
LDLRAP1-201ENST00000374338 CADPS2Q86UW7 1296 aa20.24■□□□□ 0.83
LDLRAP1-201ENST00000374338 SPATA31A3Q5VYP0 1347 aa20.24■□□□□ 0.83
LDLRAP1-201ENST00000374338 CCDC192P0DO97 292 aa20.24■□□□□ 0.83
LDLRAP1-201ENST00000374338 TRPM3Q9HCF6 1732 aaPredicted RBP20.24■□□□□ 0.83
LDLRAP1-201ENST00000374338 NOP2P46087 812 aaKnown RBP20.23■□□□□ 0.83
LDLRAP1-201ENST00000374338 CCDC144BQ3MJ40 725 aa20.23■□□□□ 0.83
LDLRAP1-201ENST00000374338 CCDC144CPQ8IYA2 1237 aa20.23■□□□□ 0.83
LDLRAP1-201ENST00000374338 CACTINQ8WUQ7 758 aaKnown RBP20.23■□□□□ 0.83
LDLRAP1-201ENST00000374338 MRVI1Q9Y6F6 885 aa20.23■□□□□ 0.83
LDLRAP1-201ENST00000374338 A0A087WWV3 80 aa20.23■□□□□ 0.83
LDLRAP1-201ENST00000374338 CYP21A2P08686 494 aa20.23■□□□□ 0.83
LDLRAP1-201ENST00000374338 MMP14P50281 582 aa20.23■□□□□ 0.83
LDLRAP1-201ENST00000374338 CCT2P78371 535 aaKnown RBP20.23■□□□□ 0.83
LDLRAP1-201ENST00000374338 FOXO4P98177 505 aa20.23■□□□□ 0.83
LDLRAP1-201ENST00000374338 ANO6Q4KMQ2 910 aa20.23■□□□□ 0.83
LDLRAP1-201ENST00000374338 TTLL5Q6EMB2 1281 aa20.23■□□□□ 0.83
LDLRAP1-201ENST00000374338 COPRSQ9NQ92 184 aa20.23■□□□□ 0.83
LDLRAP1-201ENST00000374338 ZSCAN25Q6NSZ9 544 aa20.23■□□□□ 0.83
LDLRAP1-201ENST00000374338 ASAP1Q9ULH1 1129 aa20.23■□□□□ 0.83
LDLRAP1-201ENST00000374338 HDAC5Q9UQL6 1122 aa20.23■□□□□ 0.83
LDLRAP1-201ENST00000374338 GUCY1B3Q02153 619 aa20.22■□□□□ 0.83
LDLRAP1-201ENST00000374338 TYRO3Q06418 890 aa20.22■□□□□ 0.83
LDLRAP1-201ENST00000374338 Q6ZUG5 572 aa20.22■□□□□ 0.83
LDLRAP1-201ENST00000374338 PLBD2Q8NHP8 589 aa20.22■□□□□ 0.83
LDLRAP1-201ENST00000374338 TRMT1Q9NXH9 659 aaKnown RBP20.22■□□□□ 0.83
LDLRAP1-201ENST00000374338 HAND2P61296 217 aa20.22■□□□□ 0.83
LDLRAP1-201ENST00000374338 TTC6Q86TZ1 520 aa20.22■□□□□ 0.83
LDLRAP1-201ENST00000374338 BRF1Q92994 677 aa20.22■□□□□ 0.83
LDLRAP1-201ENST00000374338 GTF3C6Q969F1 213 aa20.22■□□□□ 0.83
LDLRAP1-201ENST00000374338 RASSF4Q9H2L5 321 aa20.22■□□□□ 0.83
LDLRAP1-201ENST00000374338 N4BP2Q86UW6 1770 aaPredicted RBP20.21■□□□□ 0.83
LDLRAP1-201ENST00000374338 RPS6KB1P23443 525 aa20.21■□□□□ 0.83
LDLRAP1-201ENST00000374338 STOX1Q6ZVD7 989 aa20.21■□□□□ 0.83
LDLRAP1-201ENST00000374338 CBX8Q9HC52 389 aa20.21■□□□□ 0.83
LDLRAP1-201ENST00000374338 NCOA5Q9HCD5 579 aaKnown RBP20.21■□□□□ 0.83
LDLRAP1-201ENST00000374338 GPHNQ9NQX3 736 aaPredicted RBP20.21■□□□□ 0.83
LDLRAP1-201ENST00000374338 ZNF609O15014 1411 aa20.21■□□□□ 0.83
LDLRAP1-201ENST00000374338 ADORA1P30542 326 aa20.21■□□□□ 0.83
LDLRAP1-201ENST00000374338 CASP7P55210 303 aa20.21■□□□□ 0.83
LDLRAP1-201ENST00000374338 BMS1Q14692 1282 aaKnown RBP20.21■□□□□ 0.83
LDLRAP1-201ENST00000374338 ATG9AQ7Z3C6 839 aa20.21■□□□□ 0.83
LDLRAP1-201ENST00000374338 FAM200AQ8TCP9 573 aa20.21■□□□□ 0.83
LDLRAP1-201ENST00000374338 FTOQ9C0B1 505 aaKnown RBP eCLIP20.21■□□□□ 0.83
LDLRAP1-201ENST00000374338 ADAMTSL3P82987 1691 aa20.2■□□□□ 0.82
LDLRAP1-201ENST00000374338 ERO1AQ96HE7 468 aa20.2■□□□□ 0.82
LDLRAP1-201ENST00000374338 ZNF335Q9H4Z2 1342 aaPredicted RBP20.2■□□□□ 0.82
LDLRAP1-201ENST00000374338 DHX16O60231 1041 aaKnown RBP20.2■□□□□ 0.82
LDLRAP1-201ENST00000374338 ATP5JP18859 108 aa20.2■□□□□ 0.82
LDLRAP1-201ENST00000374338 KLHL34Q8N239 644 aa20.2■□□□□ 0.82
LDLRAP1-201ENST00000374338 IL17RAQ96F46 866 aa20.2■□□□□ 0.82
LDLRAP1-201ENST00000374338 TMX1Q9H3N1 280 aa20.2■□□□□ 0.82
LDLRAP1-201ENST00000374338 CWC25Q9NXE8 425 aaPredicted RBP20.2■□□□□ 0.82
LDLRAP1-201ENST00000374338 DACT1Q9NYF0 836 aa20.2■□□□□ 0.82
LDLRAP1-201ENST00000374338 RNF216Q9NWF9 866 aaPredicted RBP20.19■□□□□ 0.82
LDLRAP1-201ENST00000374338 NEK11Q8NG66 645 aa20.19■□□□□ 0.82
LDLRAP1-201ENST00000374338 RNF20Q5VTR2 975 aa20.18■□□□□ 0.82
LDLRAP1-201ENST00000374338 DNAJC10Q8IXB1 793 aa20.18■□□□□ 0.82
LDLRAP1-201ENST00000374338 NEK1Q96PY6 1258 aa20.18■□□□□ 0.82
LDLRAP1-201ENST00000374338 DNAJC25Q9H1X3 360 aa20.18■□□□□ 0.82
LDLRAP1-201ENST00000374338 ZNF142P52746 1687 aaPredicted RBP20.18■□□□□ 0.82
LDLRAP1-201ENST00000374338 APOBRQ0VD83 1088 aa20.18■□□□□ 0.82
LDLRAP1-201ENST00000374338 MAP3K11Q16584 847 aa20.18■□□□□ 0.82
LDLRAP1-201ENST00000374338 MUM1L1Q5H9M0 696 aa20.18■□□□□ 0.82
LDLRAP1-201ENST00000374338 SYT10Q6XYQ8 523 aa20.18■□□□□ 0.82
LDLRAP1-201ENST00000374338 NUP62CLQ9H1M0 184 aa20.18■□□□□ 0.82
LDLRAP1-201ENST00000374338 FHOD1Q9Y613 1164 aa20.18■□□□□ 0.82
LDLRAP1-201ENST00000374338 MED23Q9ULK4 1368 aa20.17■□□□□ 0.82
LDLRAP1-201ENST00000374338 A0A1B0GUL7 405 aa20.17■□□□□ 0.82
LDLRAP1-201ENST00000374338 PSEN1P49768 467 aa20.17■□□□□ 0.82
LDLRAP1-201ENST00000374338 TNS3Q68CZ2 1445 aa20.17■□□□□ 0.82
LDLRAP1-201ENST00000374338 LOC102724159A0A0B4J2E5 919 aa20.17■□□□□ 0.82
LDLRAP1-201ENST00000374338 PSMA5P28066 241 aa20.17■□□□□ 0.82
LDLRAP1-201ENST00000374338 SCARF1Q14162 830 aa20.17■□□□□ 0.82
LDLRAP1-201ENST00000374338 PWP2Q15269 919 aaKnown RBP20.17■□□□□ 0.82
LDLRAP1-201ENST00000374338 STRCP1A6NGW2 1772 aa20.17■□□□□ 0.82
LDLRAP1-201ENST00000374338 RABL6Q3YEC7 729 aaPredicted RBP20.16■□□□□ 0.82
LDLRAP1-201ENST00000374338 FBXW7Q969H0 707 aa20.16■□□□□ 0.82
LDLRAP1-201ENST00000374338 PAG1Q9NWQ8 432 aa20.16■□□□□ 0.82
LDLRAP1-201ENST00000374338 CLIP2Q9UDT6 1046 aa20.16■□□□□ 0.82
LDLRAP1-201ENST00000374338 SIPA1L3O60292 1781 aaPredicted RBP20.16■□□□□ 0.82
LDLRAP1-201ENST00000374338 SNAP23O00161 211 aa20.16■□□□□ 0.82
LDLRAP1-201ENST00000374338 HIP1O00291 1037 aa20.16■□□□□ 0.82
LDLRAP1-201ENST00000374338 GORABQ5T7V8 394 aa20.16■□□□□ 0.82
LDLRAP1-201ENST00000374338 TM6SF1Q9BZW5 370 aa20.16■□□□□ 0.82
LDLRAP1-201ENST00000374338 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.16■□□□□ 0.82
LDLRAP1-201ENST00000374338 TRIM66O15016 1216 aa20.16■□□□□ 0.82
LDLRAP1-201ENST00000374338 ZNF75DP51815 510 aa20.16■□□□□ 0.82
LDLRAP1-201ENST00000374338 GTF2A1P52655 376 aaPredicted RBP20.16■□□□□ 0.82
LDLRAP1-201ENST00000374338 MCMDC2Q4G0Z9 681 aa20.16■□□□□ 0.82
LDLRAP1-201ENST00000374338 H7C1W4 665 aa20.15■□□□□ 0.82
LDLRAP1-201ENST00000374338 IFIT1P09914 478 aaKnown RBP20.15■□□□□ 0.82
LDLRAP1-201ENST00000374338 PLA2G4AP47712 749 aa20.15■□□□□ 0.82
LDLRAP1-201ENST00000374338 C10orf67Q8IYJ2 551 aa20.15■□□□□ 0.82
LDLRAP1-201ENST00000374338 ZSCAN31Q96LW9 406 aaPredicted RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms