RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 ZC3H12CQ9C0D7 883 aaKnown RBP22.95■■□□□ 1.26
CDX4-201ENST00000373514 VPS33BQ9H267 617 aa22.95■■□□□ 1.26
CDX4-201ENST00000373514 HMMRO75330 724 aa22.94■■□□□ 1.26
CDX4-201ENST00000373514 YY1P25490 414 aa22.94■■□□□ 1.26
CDX4-201ENST00000373514 G3BP1Q13283 466 aaKnown RBP eCLIP22.94■■□□□ 1.26
CDX4-201ENST00000373514 OS9Q13438 667 aaPredicted RBP22.94■■□□□ 1.26
CDX4-201ENST00000373514 NOP58Q9Y2X3 529 aaKnown RBP22.94■■□□□ 1.26
CDX4-201ENST00000373514 FZD9O00144 591 aa22.93■■□□□ 1.26
CDX4-201ENST00000373514 FGFR2P21802 821 aa22.93■■□□□ 1.26
CDX4-201ENST00000373514 UBE4AQ14139 1066 aa22.93■■□□□ 1.26
CDX4-201ENST00000373514 PUM3Q15397 648 aaKnown RBP22.93■■□□□ 1.26
CDX4-201ENST00000373514 CEP126Q9P2H0 1117 aa22.93■■□□□ 1.26
CDX4-201ENST00000373514 WDR90Q96KV7 1748 aa22.93■■□□□ 1.26
CDX4-201ENST00000373514 ZC3H4Q9UPT8 1303 aaKnown RBP22.93■■□□□ 1.26
CDX4-201ENST00000373514 KCNQ5Q9NR82 932 aa22.92■■□□□ 1.26
CDX4-201ENST00000373514 APBB1O00213 710 aa22.92■■□□□ 1.26
CDX4-201ENST00000373514 GYG1P46976 350 aa22.92■■□□□ 1.26
CDX4-201ENST00000373514 ATP2B3Q16720 1220 aa22.92■■□□□ 1.26
CDX4-201ENST00000373514 ZNF526Q8TF50 670 aaPredicted RBP22.92■■□□□ 1.26
CDX4-201ENST00000373514 B4GALNT3Q6L9W6 998 aa22.91■■□□□ 1.26
CDX4-201ENST00000373514 C15orf52Q6ZUT6 534 aaKnown RBP22.91■■□□□ 1.26
CDX4-201ENST00000373514 ZNRF3Q9ULT6 936 aa22.91■■□□□ 1.26
CDX4-201ENST00000373514 G3V3G9 751 aa22.9■■□□□ 1.26
CDX4-201ENST00000373514 DCAF8Q5TAQ9 597 aa22.9■■□□□ 1.26
CDX4-201ENST00000373514 RAD17O75943 681 aa22.89■■□□□ 1.26
CDX4-201ENST00000373514 SLC5A1P13866 664 aa22.89■■□□□ 1.26
CDX4-201ENST00000373514 ADORA1P30542 326 aa22.89■■□□□ 1.26
CDX4-201ENST00000373514 LPIN2Q92539 896 aa22.89■■□□□ 1.26
CDX4-201ENST00000373514 CXCL9Q07325 125 aa22.88■■□□□ 1.25
CDX4-201ENST00000373514 A0A1B0GUL7 405 aa22.87■■□□□ 1.25
CDX4-201ENST00000373514 DDNO94850 711 aaPredicted RBP22.87■■□□□ 1.25
CDX4-201ENST00000373514 IFIT1P09914 478 aaKnown RBP22.87■■□□□ 1.25
CDX4-201ENST00000373514 EIF6P56537 245 aaKnown RBP22.87■■□□□ 1.25
CDX4-201ENST00000373514 TIMM10P62072 90 aa22.87■■□□□ 1.25
CDX4-201ENST00000373514 ZNF804AQ7Z570 1209 aa22.87■■□□□ 1.25
CDX4-201ENST00000373514 CCDC136Q96JN2 1154 aa22.87■■□□□ 1.25
CDX4-201ENST00000373514 FAM84BQ96KN1 310 aaPredicted RBP22.87■■□□□ 1.25
CDX4-201ENST00000373514 COA1Q9GZY4 146 aa22.87■■□□□ 1.25
CDX4-201ENST00000373514 COL1A1P02452 1464 aaPredicted RBP22.87■■□□□ 1.25
CDX4-201ENST00000373514 SCN4AP35499 1836 aa22.87■■□□□ 1.25
CDX4-201ENST00000373514 ADAMTSL1Q8N6G6 1762 aa22.87■■□□□ 1.25
CDX4-201ENST00000373514 CD209Q9NNX6 404 aa22.87■■□□□ 1.25
CDX4-201ENST00000373514 IQSEC3Q9UPP2 1182 aaPredicted RBP22.87■■□□□ 1.25
CDX4-201ENST00000373514 GJA3Q9Y6H8 435 aa22.87■■□□□ 1.25
CDX4-201ENST00000373514 GLTPD2A6NH11 291 aa22.86■■□□□ 1.25
CDX4-201ENST00000373514 BCAMP50895 628 aa22.86■■□□□ 1.25
CDX4-201ENST00000373514 TNNI3KQ59H18 835 aa22.86■■□□□ 1.25
CDX4-201ENST00000373514 RHPN1Q8TCX5 695 aa22.86■■□□□ 1.25
CDX4-201ENST00000373514 BCL11AQ9H165 835 aa22.86■■□□□ 1.25
CDX4-201ENST00000373514 IL1RAPL2Q9NP60 686 aa22.86■■□□□ 1.25
CDX4-201ENST00000373514 FPGT-TNNI3KV9GXZ4 949 aa22.86■■□□□ 1.25
CDX4-201ENST00000373514 PSMD14O00487 310 aa22.85■■□□□ 1.25
CDX4-201ENST00000373514 AAMPQ13685 434 aa22.85■■□□□ 1.25
CDX4-201ENST00000373514 CIAPIN1Q6FI81 312 aa22.85■■□□□ 1.25
CDX4-201ENST00000373514 FBXW7Q969H0 707 aa22.85■■□□□ 1.25
CDX4-201ENST00000373514 TLR7Q9NYK1 1049 aaKnown RBP22.85■■□□□ 1.25
CDX4-201ENST00000373514 JAG2Q9Y219 1238 aa22.85■■□□□ 1.25
CDX4-201ENST00000373514 AKAP11Q9UKA4 1901 aa22.85■■□□□ 1.25
CDX4-201ENST00000373514 HIBADHP31937 336 aaKnown RBP22.84■■□□□ 1.25
CDX4-201ENST00000373514 HSP90AB4PQ58FF6 505 aa22.84■■□□□ 1.25
CDX4-201ENST00000373514 ERC1Q8IUD2 1116 aa22.84■■□□□ 1.25
CDX4-201ENST00000373514 NEUROD6Q96NK8 337 aa22.84■■□□□ 1.25
CDX4-201ENST00000373514 AKAP2Q9Y2D5 859 aa22.84■■□□□ 1.25
CDX4-201ENST00000373514 IL1R1P14778 569 aa22.83■■□□□ 1.25
CDX4-201ENST00000373514 PODNQ7Z5L7 613 aa22.83■■□□□ 1.25
CDX4-201ENST00000373514 FBXO33Q7Z6M2 555 aa22.83■■□□□ 1.25
CDX4-201ENST00000373514 XAGE2Q96GT9 111 aa22.83■■□□□ 1.25
CDX4-201ENST00000373514 MXD3Q9BW11 206 aa22.83■■□□□ 1.25
CDX4-201ENST00000373514 MYO5AQ9Y4I1 1855 aaKnown RBP22.83■■□□□ 1.25
CDX4-201ENST00000373514 SMARCA5O60264 1052 aaPredicted RBP22.82■■□□□ 1.24
CDX4-201ENST00000373514 PHKA1P46020 1223 aa22.82■■□□□ 1.24
CDX4-201ENST00000373514 CAVIN4Q5BKX8 364 aa22.82■■□□□ 1.24
CDX4-201ENST00000373514 GPC2Q8N158 579 aa22.82■■□□□ 1.24
CDX4-201ENST00000373514 ZNF784Q8NCA9 323 aaPredicted RBP22.82■■□□□ 1.24
CDX4-201ENST00000373514 EAF2Q96CJ1 260 aaPredicted RBP22.82■■□□□ 1.24
CDX4-201ENST00000373514 DCTPP1Q9H773 170 aa22.82■■□□□ 1.24
CDX4-201ENST00000373514 DPY19L2Q6NUT2 758 aa22.82■■□□□ 1.24
CDX4-201ENST00000373514 VPS37DQ86XT2 251 aa22.82■■□□□ 1.24
CDX4-201ENST00000373514 TDRD7Q8NHU6 1098 aaKnown RBP22.82■■□□□ 1.24
CDX4-201ENST00000373514 KIF1BPQ96EK5 621 aa22.82■■□□□ 1.24
CDX4-201ENST00000373514 DBNDD2Q9BQY9 259 aa22.82■■□□□ 1.24
CDX4-201ENST00000373514 NMRK2Q9NPI5 230 aa22.82■■□□□ 1.24
CDX4-201ENST00000373514 ZBTB12Q9Y330 459 aaPredicted RBP22.82■■□□□ 1.24
CDX4-201ENST00000373514 KDM2BQ8NHM5 1336 aa22.81■■□□□ 1.24
CDX4-201ENST00000373514 IGHDP01880 384 aa22.81■■□□□ 1.24
CDX4-201ENST00000373514 GTF2IP78347 998 aa22.81■■□□□ 1.24
CDX4-201ENST00000373514 HDAC1Q13547 482 aaPredicted RBP22.81■■□□□ 1.24
CDX4-201ENST00000373514 CCDC8Q9H0W5 538 aaPredicted RBP22.81■■□□□ 1.24
CDX4-201ENST00000373514 GPR108Q9NPR9 543 aa22.81■■□□□ 1.24
CDX4-201ENST00000373514 SHTN1A0MZ66 631 aa22.8■■□□□ 1.24
CDX4-201ENST00000373514 USP17L3A6NCW0 530 aa22.8■■□□□ 1.24
CDX4-201ENST00000373514 USP17L4A6NCW7 530 aa22.8■■□□□ 1.24
CDX4-201ENST00000373514 RAB11FIP3O75154 756 aa22.8■■□□□ 1.24
CDX4-201ENST00000373514 GMPSP49915 693 aaPredicted RBP22.8■■□□□ 1.24
CDX4-201ENST00000373514 CCDC102BQ68D86 513 aa22.8■■□□□ 1.24
CDX4-201ENST00000373514 USP17L1Q7RTZ2 530 aa22.8■■□□□ 1.24
CDX4-201ENST00000373514 AACSQ86V21 672 aa22.8■■□□□ 1.24
CDX4-201ENST00000373514 DBNLQ9UJU6 430 aaKnown RBP22.8■■□□□ 1.24
CDX4-201ENST00000373514 POTECB2RU33 542 aa22.79■■□□□ 1.24
CDX4-201ENST00000373514 SCNN1DP51172 638 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms