RNA–Protein interactions for RNA: ENST00000373492.6

PBX3-205, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-205ENST00000373492 WTIPA6NIX2 430 aaPredicted RBP22.79■■□□□ 1.24
PBX3-205ENST00000373492 KCNJ4P48050 445 aa22.79■■□□□ 1.24
PBX3-205ENST00000373492 PODNQ7Z5L7 613 aa22.79■■□□□ 1.24
PBX3-205ENST00000373492 LDHDQ86WU2 507 aa22.79■■□□□ 1.24
PBX3-205ENST00000373492 GPRC5DQ9NZD1 345 aa22.79■■□□□ 1.24
PBX3-205ENST00000373492 RIPOR2Q9Y4F9 1068 aa22.79■■□□□ 1.24
PBX3-205ENST00000373492 PNMA6EA0A0J9YXQ4 647 aa22.78■■□□□ 1.24
PBX3-205ENST00000373492 EYA2O00167 538 aa22.78■■□□□ 1.24
PBX3-205ENST00000373492 PSMD14O00487 310 aa22.78■■□□□ 1.24
PBX3-205ENST00000373492 GMPSP49915 693 aaPredicted RBP22.78■■□□□ 1.24
PBX3-205ENST00000373492 LRRC24Q50LG9 513 aa22.78■■□□□ 1.24
PBX3-205ENST00000373492 SIL1Q9H173 461 aa22.78■■□□□ 1.24
PBX3-205ENST00000373492 COPRSQ9NQ92 184 aa22.78■■□□□ 1.24
PBX3-205ENST00000373492 EPS15P42566 896 aa22.77■■□□□ 1.24
PBX3-205ENST00000373492 METTL24Q5JXM2 366 aa22.77■■□□□ 1.24
PBX3-205ENST00000373492 CHADLQ6NUI6 762 aa22.77■■□□□ 1.24
PBX3-205ENST00000373492 CEP85Q6P2H3 762 aa22.77■■□□□ 1.24
PBX3-205ENST00000373492 HELBQ8NG08 1087 aaPredicted RBP22.77■■□□□ 1.24
PBX3-205ENST00000373492 DPF2Q92785 391 aa22.77■■□□□ 1.24
PBX3-205ENST00000373492 COA1Q9GZY4 146 aa22.77■■□□□ 1.24
PBX3-205ENST00000373492 TAF5LO75529 589 aa22.76■■□□□ 1.23
PBX3-205ENST00000373492 CIAO1O76071 339 aa22.76■■□□□ 1.23
PBX3-205ENST00000373492 RPS12P25398 132 aaKnown RBP22.76■■□□□ 1.23
PBX3-205ENST00000373492 EAPPQ56P03 285 aaPredicted RBP22.76■■□□□ 1.23
PBX3-205ENST00000373492 RPAP2Q8IXW5 612 aaPredicted RBP22.76■■□□□ 1.23
PBX3-205ENST00000373492 SSH3Q8TE77 659 aa22.76■■□□□ 1.23
PBX3-205ENST00000373492 KCNQ5Q9NR82 932 aa22.76■■□□□ 1.23
PBX3-205ENST00000373492 PA2G4Q9UQ80 394 aaKnown RBP22.76■■□□□ 1.23
PBX3-205ENST00000373492 ARAP2Q8WZ64 1704 aa22.75■■□□□ 1.23
PBX3-205ENST00000373492 VIL1P09327 827 aaKnown RBP22.75■■□□□ 1.23
PBX3-205ENST00000373492 POTEIP0CG38 1075 aa22.75■■□□□ 1.23
PBX3-205ENST00000373492 POTEJP0CG39 1038 aa22.75■■□□□ 1.23
PBX3-205ENST00000373492 POLA2Q14181 598 aa22.75■■□□□ 1.23
PBX3-205ENST00000373492 C15orf52Q6ZUT6 534 aaKnown RBP22.75■■□□□ 1.23
PBX3-205ENST00000373492 USP50Q70EL3 339 aaPredicted RBP22.75■■□□□ 1.23
PBX3-205ENST00000373492 CRBNQ96SW2 442 aa22.75■■□□□ 1.23
PBX3-205ENST00000373492 ADARB2Q9NS39 739 aaKnown RBP22.75■■□□□ 1.23
PBX3-205ENST00000373492 SCN9AQ15858 1988 aa22.74■■□□□ 1.23
PBX3-205ENST00000373492 HMMRO75330 724 aa22.74■■□□□ 1.23
PBX3-205ENST00000373492 IL15P40933 162 aaPredicted RBP22.74■■□□□ 1.23
PBX3-205ENST00000373492 TXNRD3Q86VQ6 643 aa22.74■■□□□ 1.23
PBX3-205ENST00000373492 APLP1P51693 650 aa22.73■■□□□ 1.23
PBX3-205ENST00000373492 G3BP1Q13283 466 aaKnown RBP eCLIP22.73■■□□□ 1.23
PBX3-205ENST00000373492 ATG9AQ7Z3C6 839 aa22.73■■□□□ 1.23
PBX3-205ENST00000373492 CNOT7Q9UIV1 285 aaKnown RBP22.73■■□□□ 1.23
PBX3-205ENST00000373492 CLEC11AQ9Y240 323 aa22.73■■□□□ 1.23
PBX3-205ENST00000373492 ZBTB12Q9Y330 459 aaPredicted RBP22.73■■□□□ 1.23
PBX3-205ENST00000373492 USP17L3A6NCW0 530 aa22.72■■□□□ 1.23
PBX3-205ENST00000373492 USP17L4A6NCW7 530 aa22.72■■□□□ 1.23
PBX3-205ENST00000373492 H7C1D1 291 aa22.72■■□□□ 1.23
PBX3-205ENST00000373492 PDE8BO95263 885 aa22.72■■□□□ 1.23
PBX3-205ENST00000373492 CENPBP07199 599 aaPredicted RBP22.72■■□□□ 1.23
PBX3-205ENST00000373492 KLRK1P26718 216 aa22.72■■□□□ 1.23
PBX3-205ENST00000373492 UBE4AQ14139 1066 aa22.72■■□□□ 1.23
PBX3-205ENST00000373492 USP17L1Q7RTZ2 530 aa22.72■■□□□ 1.23
PBX3-205ENST00000373492 CEP126Q9P2H0 1117 aa22.72■■□□□ 1.23
PBX3-205ENST00000373492 IRS2Q9Y4H2 1338 aa22.72■■□□□ 1.23
PBX3-205ENST00000373492 RSBN1LQ6PCB5 846 aaPredicted RBP22.71■■□□□ 1.23
PBX3-205ENST00000373492 MICALL2Q8IY33 904 aa22.71■■□□□ 1.23
PBX3-205ENST00000373492 ZNF609O15014 1411 aa22.71■■□□□ 1.23
PBX3-205ENST00000373492 ADAMTSL1Q8N6G6 1762 aa22.71■■□□□ 1.23
PBX3-205ENST00000373492 SNAP23O00161 211 aa22.7■■□□□ 1.22
PBX3-205ENST00000373492 SURF6O75683 361 aaKnown RBP22.7■■□□□ 1.22
PBX3-205ENST00000373492 OS9Q13438 667 aaPredicted RBP22.7■■□□□ 1.22
PBX3-205ENST00000373492 AAMPQ13685 434 aa22.7■■□□□ 1.22
PBX3-205ENST00000373492 VGLL2Q8N8G2 317 aa22.7■■□□□ 1.22
PBX3-205ENST00000373492 AGBL3Q8NEM8 1001 aa22.7■■□□□ 1.22
PBX3-205ENST00000373492 ZNF646O15015 1829 aaPredicted RBP22.69■■□□□ 1.22
PBX3-205ENST00000373492 PUM3Q15397 648 aaKnown RBP22.69■■□□□ 1.22
PBX3-205ENST00000373492 STRIP1Q5VSL9 837 aa22.69■■□□□ 1.22
PBX3-205ENST00000373492 CD209Q9NNX6 404 aa22.69■■□□□ 1.22
PBX3-205ENST00000373492 ZNF804AQ7Z570 1209 aa22.68■■□□□ 1.22
PBX3-205ENST00000373492 IFIT1P09914 478 aaKnown RBP22.67■■□□□ 1.22
PBX3-205ENST00000373492 HSP90AB4PQ58FF6 505 aa22.67■■□□□ 1.22
PBX3-205ENST00000373492 CNTROBQ8N137 903 aa22.67■■□□□ 1.22
PBX3-205ENST00000373492 ZC3H15Q8WU90 426 aaKnown RBP22.67■■□□□ 1.22
PBX3-205ENST00000373492 NOP58Q9Y2X3 529 aaKnown RBP22.67■■□□□ 1.22
PBX3-205ENST00000373492 MYO3BQ8WXR4 1341 aa22.66■■□□□ 1.22
PBX3-205ENST00000373492 SLC5A1P13866 664 aa22.66■■□□□ 1.22
PBX3-205ENST00000373492 IL1R1P14778 569 aa22.66■■□□□ 1.22
PBX3-205ENST00000373492 DACT2Q5SW24 774 aa22.66■■□□□ 1.22
PBX3-205ENST00000373492 TTLL5Q6EMB2 1281 aa22.66■■□□□ 1.22
PBX3-205ENST00000373492 GMLQ99445 158 aa22.66■■□□□ 1.22
PBX3-205ENST00000373492 PGAP2Q9UHJ9 254 aa22.66■■□□□ 1.22
PBX3-205ENST00000373492 AKAP2Q9Y2D5 859 aa22.66■■□□□ 1.22
PBX3-205ENST00000373492 PASKQ96RG2 1323 aa22.65■■□□□ 1.22
PBX3-205ENST00000373492 SHTN1A0MZ66 631 aa22.65■■□□□ 1.22
PBX3-205ENST00000373492 ITGBL1O95965 494 aaPredicted RBP22.65■■□□□ 1.22
PBX3-205ENST00000373492 TFCP2Q12800 502 aa22.65■■□□□ 1.22
PBX3-205ENST00000373492 ATP2B3Q16720 1220 aa22.65■■□□□ 1.22
PBX3-205ENST00000373492 MAP1SQ66K74 1059 aaPredicted RBP22.65■■□□□ 1.22
PBX3-205ENST00000373492 SIRT2Q8IXJ6 389 aa22.65■■□□□ 1.22
PBX3-205ENST00000373492 LPIN2Q92539 896 aa22.65■■□□□ 1.22
PBX3-205ENST00000373492 FGFR2P21802 821 aa22.64■■□□□ 1.21
PBX3-205ENST00000373492 MMP14P50281 582 aa22.64■■□□□ 1.21
PBX3-205ENST00000373492 HIRAP54198 1017 aaPredicted RBP22.64■■□□□ 1.21
PBX3-205ENST00000373492 ZNF280AP59817 542 aaPredicted RBP22.64■■□□□ 1.21
PBX3-205ENST00000373492 CAVIN4Q5BKX8 364 aa22.64■■□□□ 1.21
PBX3-205ENST00000373492 ERC1Q8IUD2 1116 aa22.64■■□□□ 1.21
PBX3-205ENST00000373492 EXOC6Q8TAG9 804 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms