RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 DDX11Q96FC9 970 aa22.19■■□□□ 1.14
USP49-202ENST00000373010 ADAMTS2O95450 1211 aa22.18■■□□□ 1.14
USP49-202ENST00000373010 KRT85P78386 507 aa22.18■■□□□ 1.14
USP49-202ENST00000373010 EXOSC10Q01780 885 aaKnown RBP22.18■■□□□ 1.14
USP49-202ENST00000373010 APOBRQ0VD83 1088 aa22.18■■□□□ 1.14
USP49-202ENST00000373010 CNNM1Q9NRU3 951 aa22.18■■□□□ 1.14
USP49-202ENST00000373010 AHDC1Q5TGY3 1603 aaPredicted RBP22.18■■□□□ 1.14
USP49-202ENST00000373010 UBN2Q6ZU65 1347 aa22.18■■□□□ 1.14
USP49-202ENST00000373010 IL6STP40189 918 aaPredicted RBP22.17■■□□□ 1.14
USP49-202ENST00000373010 CHST3Q7LGC8 479 aa22.17■■□□□ 1.14
USP49-202ENST00000373010 FOXP2O15409 715 aa22.17■■□□□ 1.14
USP49-202ENST00000373010 PFKFB2O60825 505 aa22.16■■□□□ 1.14
USP49-202ENST00000373010 TFIP11Q9UBB9 837 aaKnown RBP22.16■■□□□ 1.14
USP49-202ENST00000373010 NWD2Q9ULI1 1742 aa22.16■■□□□ 1.14
USP49-202ENST00000373010 ERVV-1B6SEH8 477 aa22.16■■□□□ 1.14
USP49-202ENST00000373010 MCAMP43121 646 aa22.16■■□□□ 1.14
USP49-202ENST00000373010 LRRFIP1Q32MZ4 808 aaKnown RBP22.16■■□□□ 1.14
USP49-202ENST00000373010 ACSBG1Q96GR2 724 aa22.16■■□□□ 1.14
USP49-202ENST00000373010 MYH7P12883 1935 aa22.15■■□□□ 1.14
USP49-202ENST00000373010 AKAP11Q9UKA4 1901 aa22.15■■□□□ 1.14
USP49-202ENST00000373010 PDE8AO60658 829 aa22.15■■□□□ 1.14
USP49-202ENST00000373010 ZFYP08048 801 aaPredicted RBP22.15■■□□□ 1.14
USP49-202ENST00000373010 PUS7LQ9H0K6 701 aaKnown RBP22.15■■□□□ 1.14
USP49-202ENST00000373010 HAND2P61296 217 aa22.15■■□□□ 1.14
USP49-202ENST00000373010 ZNF34Q8IZ26 560 aa22.15■■□□□ 1.14
USP49-202ENST00000373010 VGLL2Q8N8G2 317 aa22.15■■□□□ 1.14
USP49-202ENST00000373010 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.15■■□□□ 1.14
USP49-202ENST00000373010 SLIT2O94813 1529 aa22.14■■□□□ 1.14
USP49-202ENST00000373010 GIMAP6Q6P9H5 292 aa22.14■■□□□ 1.13
USP49-202ENST00000373010 LETM1O95202 739 aaPredicted RBP22.14■■□□□ 1.13
USP49-202ENST00000373010 CCT2P78371 535 aaKnown RBP22.14■■□□□ 1.13
USP49-202ENST00000373010 ZSCAN30Q86W11 494 aa22.14■■□□□ 1.13
USP49-202ENST00000373010 SMARCC2Q8TAQ2 1214 aa22.14■■□□□ 1.13
USP49-202ENST00000373010 APPBP2Q92624 585 aa22.14■■□□□ 1.13
USP49-202ENST00000373010 AGXT2Q9BYV1 514 aa22.14■■□□□ 1.13
USP49-202ENST00000373010 NAP1L2Q9ULW6 460 aaPredicted RBP22.14■■□□□ 1.13
USP49-202ENST00000373010 FAM177BA6PVY3 158 aa22.13■■□□□ 1.13
USP49-202ENST00000373010 CTDNEP1O95476 244 aa22.13■■□□□ 1.13
USP49-202ENST00000373010 DDB1Q16531 1140 aa22.13■■□□□ 1.13
USP49-202ENST00000373010 NSUN7Q8NE18 718 aaKnown RBP22.13■■□□□ 1.13
USP49-202ENST00000373010 NCOA5Q9HCD5 579 aaKnown RBP22.13■■□□□ 1.13
USP49-202ENST00000373010 SPATA31A1Q5TZJ5 1347 aa22.13■■□□□ 1.13
USP49-202ENST00000373010 FOSBP53539 338 aa22.12■■□□□ 1.13
USP49-202ENST00000373010 INTS5Q6P9B9 1019 aaKnown RBP22.12■■□□□ 1.13
USP49-202ENST00000373010 FAM184AQ8NB25 1140 aa22.12■■□□□ 1.13
USP49-202ENST00000373010 ABCC12Q96J65 1359 aa22.12■■□□□ 1.13
USP49-202ENST00000373010 EIF5P55010 431 aaKnown RBP22.12■■□□□ 1.13
USP49-202ENST00000373010 RESTQ13127 1097 aa22.12■■□□□ 1.13
USP49-202ENST00000373010 HELBQ8NG08 1087 aaPredicted RBP22.12■■□□□ 1.13
USP49-202ENST00000373010 MYO5AQ9Y4I1 1855 aaKnown RBP22.12■■□□□ 1.13
USP49-202ENST00000373010 ELP1O95163 1332 aa22.11■■□□□ 1.13
USP49-202ENST00000373010 H3BQV1 296 aa22.11■■□□□ 1.13
USP49-202ENST00000373010 PDE8BO95263 885 aa22.11■■□□□ 1.13
USP49-202ENST00000373010 FGAP02671 866 aa22.11■■□□□ 1.13
USP49-202ENST00000373010 HCLS1P14317 486 aaPredicted RBP22.11■■□□□ 1.13
USP49-202ENST00000373010 IFFO2Q5TF58 517 aa22.11■■□□□ 1.13
USP49-202ENST00000373010 LLPHQ9BRT6 129 aaKnown RBP22.11■■□□□ 1.13
USP49-202ENST00000373010 GPHNQ9NQX3 736 aaPredicted RBP22.11■■□□□ 1.13
USP49-202ENST00000373010 PPFIA3O75145 1194 aa22.11■■□□□ 1.13
USP49-202ENST00000373010 SUSD4Q5VX71 490 aa22.11■■□□□ 1.13
USP49-202ENST00000373010 SPATA32Q96LK8 384 aa22.11■■□□□ 1.13
USP49-202ENST00000373010 CTNNA3Q9UI47 895 aa22.11■■□□□ 1.13
USP49-202ENST00000373010 PTPDC1A2A3K4 754 aa22.1■■□□□ 1.13
USP49-202ENST00000373010 LIG1P18858 919 aa22.1■■□□□ 1.13
USP49-202ENST00000373010 ATP6V1AP38606 617 aa22.1■■□□□ 1.13
USP49-202ENST00000373010 LEO1Q8WVC0 666 aaPredicted RBP22.1■■□□□ 1.13
USP49-202ENST00000373010 CCDC87Q9NVE4 849 aa22.1■■□□□ 1.13
USP49-202ENST00000373010 GPAA1O43292 621 aa22.1■■□□□ 1.13
USP49-202ENST00000373010 PHKA1P46020 1223 aa22.1■■□□□ 1.13
USP49-202ENST00000373010 CRKLP46109 303 aaKnown RBP22.1■■□□□ 1.13
USP49-202ENST00000373010 IMMTQ16891 758 aaKnown RBP22.1■■□□□ 1.13
USP49-202ENST00000373010 MARCH10Q8NA82 808 aaPredicted RBP22.1■■□□□ 1.13
USP49-202ENST00000373010 SCAND2PQ9GZW5 306 aaPredicted RBP22.1■■□□□ 1.13
USP49-202ENST00000373010 PIH1D3Q9NQM4 214 aaKnown RBP22.1■■□□□ 1.13
USP49-202ENST00000373010 PDIA3P30101 505 aaKnown RBP22.09■■□□□ 1.13
USP49-202ENST00000373010 HS1BP3Q53T59 392 aa22.09■■□□□ 1.13
USP49-202ENST00000373010 FUCA2Q9BTY2 467 aa22.09■■□□□ 1.13
USP49-202ENST00000373010 CDCA7Q9BWT1 371 aaPredicted RBP22.09■■□□□ 1.13
USP49-202ENST00000373010 NRAPQ86VF7 1730 aa22.09■■□□□ 1.13
USP49-202ENST00000373010 CCDC102BQ68D86 513 aa22.08■■□□□ 1.13
USP49-202ENST00000373010 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.08■■□□□ 1.13
USP49-202ENST00000373010 NUTM2BA6NNL0 878 aaPredicted RBP22.08■■□□□ 1.12
USP49-202ENST00000373010 NUTM2EB1AL46 878 aaPredicted RBP22.08■■□□□ 1.12
USP49-202ENST00000373010 SLC9C2Q5TAH2 1124 aa22.08■■□□□ 1.12
USP49-202ENST00000373010 NUTM2AQ8IVF1 878 aaPredicted RBP22.08■■□□□ 1.12
USP49-202ENST00000373010 ZNF512BQ96KM6 892 aaPredicted RBP22.08■■□□□ 1.12
USP49-202ENST00000373010 ADD2P35612 726 aa22.07■■□□□ 1.12
USP49-202ENST00000373010 ITPK1Q13572 414 aa22.07■■□□□ 1.12
USP49-202ENST00000373010 ZNF274Q96GC6 653 aaPredicted RBP22.07■■□□□ 1.12
USP49-202ENST00000373010 LOC102724428A0A0B4J2F2 783 aa22.07■■□□□ 1.12
USP49-202ENST00000373010 IDH1O75874 414 aaKnown RBP22.07■■□□□ 1.12
USP49-202ENST00000373010 MSNP26038 577 aaKnown RBP22.07■■□□□ 1.12
USP49-202ENST00000373010 SIK1P57059 783 aa22.07■■□□□ 1.12
USP49-202ENST00000373010 SNAP23O00161 211 aa22.06■■□□□ 1.12
USP49-202ENST00000373010 UVSSAQ2YD98 709 aa22.06■■□□□ 1.12
USP49-202ENST00000373010 ANO8Q9HCE9 1232 aaPredicted RBP22.06■■□□□ 1.12
USP49-202ENST00000373010 SEC31BQ9NQW1 1179 aa22.06■■□□□ 1.12
USP49-202ENST00000373010 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.06■■□□□ 1.12
USP49-202ENST00000373010 THRAP3Q9Y2W1 955 aaKnown RBP22.06■■□□□ 1.12
USP49-202ENST00000373010 PHLPP1O60346 1717 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms