RNA–Protein interactions for RNA: ENST00000372972.6

CSTF2-201, Transcript of cleavage stimulation factor subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF2, Length 1,958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-201ENST00000372972 CCNL1Q9UK58 526 aaPredicted RBP15.95■□□□□ 0.14
CSTF2-201ENST00000372972 ABCC12Q96J65 1359 aa15.94■□□□□ 0.14
CSTF2-201ENST00000372972 ZNF445P59923 1031 aa15.94■□□□□ 0.14
CSTF2-201ENST00000372972 RC3H1Q5TC82 1133 aaKnown RBP15.94■□□□□ 0.14
CSTF2-201ENST00000372972 TCEANC2Q96MN5 208 aa15.94■□□□□ 0.14
CSTF2-201ENST00000372972 ATP6V1DQ9Y5K8 247 aa15.94■□□□□ 0.14
CSTF2-201ENST00000372972 RIC1Q4ADV7 1423 aa15.94■□□□□ 0.14
CSTF2-201ENST00000372972 MAST3O60307 1309 aa15.93■□□□□ 0.14
CSTF2-201ENST00000372972 HMGB1P09429 215 aaKnown RBP15.93■□□□□ 0.14
CSTF2-201ENST00000372972 HSPD1P10809 573 aaKnown RBP15.93■□□□□ 0.14
CSTF2-201ENST00000372972 FAM177BA6PVY3 158 aa15.93■□□□□ 0.14
CSTF2-201ENST00000372972 PDE8BO95263 885 aa15.93■□□□□ 0.14
CSTF2-201ENST00000372972 ZSCAN23Q3MJ62 389 aa15.93■□□□□ 0.14
CSTF2-201ENST00000372972 PARP10Q53GL7 1025 aa15.93■□□□□ 0.14
CSTF2-201ENST00000372972 SMIM5Q71RC9 77 aa15.93■□□□□ 0.14
CSTF2-201ENST00000372972 VGLL2Q8N8G2 317 aa15.93■□□□□ 0.14
CSTF2-201ENST00000372972 ZNF512BQ96KM6 892 aaPredicted RBP15.93■□□□□ 0.14
CSTF2-201ENST00000372972 UTP14AQ9BVJ6 771 aaKnown RBP15.93■□□□□ 0.14
CSTF2-201ENST00000372972 NIP7Q9Y221 180 aaKnown RBP eCLIP15.93■□□□□ 0.14
CSTF2-201ENST00000372972 BCORQ6W2J9 1755 aa15.92■□□□□ 0.14
CSTF2-201ENST00000372972 LY75O60449 1722 aa15.92■□□□□ 0.14
CSTF2-201ENST00000372972 F13A1P00488 732 aa15.92■□□□□ 0.14
CSTF2-201ENST00000372972 ZAP70P43403 619 aa15.92■□□□□ 0.14
CSTF2-201ENST00000372972 SCARF1Q14162 830 aa15.92■□□□□ 0.14
CSTF2-201ENST00000372972 FOXD4L6Q3SYB3 417 aaPredicted RBP15.92■□□□□ 0.14
CSTF2-201ENST00000372972 FOXD4L3Q6VB84 417 aaPredicted RBP15.92■□□□□ 0.14
CSTF2-201ENST00000372972 PANK2Q9BZ23 570 aa15.92■□□□□ 0.14
CSTF2-201ENST00000372972 BCL11BQ9C0K0 894 aaPredicted RBP15.92■□□□□ 0.14
CSTF2-201ENST00000372972 MYH3P11055 1940 aa15.92■□□□□ 0.14
CSTF2-201ENST00000372972 RPS6KA4O75676 772 aa15.91■□□□□ 0.14
CSTF2-201ENST00000372972 OSBP2Q969R2 916 aa15.91■□□□□ 0.14
CSTF2-201ENST00000372972 ZNF652Q9Y2D9 606 aa15.91■□□□□ 0.14
CSTF2-201ENST00000372972 BRWD3Q6RI45 1802 aa15.91■□□□□ 0.14
CSTF2-201ENST00000372972 M0R2C6 588 aa15.91■□□□□ 0.14
CSTF2-201ENST00000372972 Q6ZUG5 572 aa15.91■□□□□ 0.14
CSTF2-201ENST00000372972 KRT27Q7Z3Y8 459 aa15.91■□□□□ 0.14
CSTF2-201ENST00000372972 USP48Q86UV5 1035 aa15.91■□□□□ 0.14
CSTF2-201ENST00000372972 TMEM87AQ8NBN3 555 aa15.91■□□□□ 0.14
CSTF2-201ENST00000372972 MTMR6Q9Y217 621 aa15.91■□□□□ 0.14
CSTF2-201ENST00000372972 MROH5Q6ZUA9 1318 aa15.9■□□□□ 0.14
CSTF2-201ENST00000372972 GNPATO15228 680 aa15.9■□□□□ 0.14
CSTF2-201ENST00000372972 HCLS1P14317 486 aaPredicted RBP15.9■□□□□ 0.14
CSTF2-201ENST00000372972 HSP90B1P14625 803 aaKnown RBP15.9■□□□□ 0.14
CSTF2-201ENST00000372972 PDCP20941 246 aa15.9■□□□□ 0.14
CSTF2-201ENST00000372972 WASHC4Q2M389 1173 aa15.9■□□□□ 0.14
CSTF2-201ENST00000372972 CLEC4GQ6UXB4 293 aa15.9■□□□□ 0.14
CSTF2-201ENST00000372972 STOX1Q6ZVD7 989 aa15.9■□□□□ 0.14
CSTF2-201ENST00000372972 DHX32Q7L7V1 743 aaKnown RBP15.9■□□□□ 0.14
CSTF2-201ENST00000372972 NSFL1CQ9UNZ2 370 aaKnown RBP15.9■□□□□ 0.14
CSTF2-201ENST00000372972 NTSR2O95665 410 aa15.89■□□□□ 0.13
CSTF2-201ENST00000372972 MCAMP43121 646 aa15.89■□□□□ 0.13
CSTF2-201ENST00000372972 LARP1BQ659C4 914 aaKnown RBP15.89■□□□□ 0.13
CSTF2-201ENST00000372972 FAM196AQ6ZSG2 479 aa15.89■□□□□ 0.13
CSTF2-201ENST00000372972 APPBP2Q92624 585 aa15.89■□□□□ 0.13
CSTF2-201ENST00000372972 TMEM63CQ9P1W3 806 aa15.89■□□□□ 0.13
CSTF2-201ENST00000372972 RBM27Q9P2N5 1060 aaKnown RBP15.89■□□□□ 0.13
CSTF2-201ENST00000372972 CTNNA3Q9UI47 895 aa15.89■□□□□ 0.13
CSTF2-201ENST00000372972 TAF1LQ8IZX4 1826 aa15.89■□□□□ 0.13
CSTF2-201ENST00000372972 TTF1Q15361 905 aaPredicted RBP15.89■□□□□ 0.13
CSTF2-201ENST00000372972 PUM3Q15397 648 aaKnown RBP15.89■□□□□ 0.13
CSTF2-201ENST00000372972 ZSCAN25Q6NSZ9 544 aa15.89■□□□□ 0.13
CSTF2-201ENST00000372972 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.89■□□□□ 0.13
CSTF2-201ENST00000372972 GDPD2Q9HCC8 539 aa15.89■□□□□ 0.13
CSTF2-201ENST00000372972 E7EWF7 191 aa15.88■□□□□ 0.13
CSTF2-201ENST00000372972 STK3Q13188 491 aa15.88■□□□□ 0.13
CSTF2-201ENST00000372972 PI16Q6UXB8 463 aa15.88■□□□□ 0.13
CSTF2-201ENST00000372972 LPIN2Q92539 896 aa15.88■□□□□ 0.13
CSTF2-201ENST00000372972 CNPY2Q9Y2B0 182 aa15.88■□□□□ 0.13
CSTF2-201ENST00000372972 DTNBO60941 627 aa15.87■□□□□ 0.13
CSTF2-201ENST00000372972 UQCRFS1P1P0C7P4 283 aa15.87■□□□□ 0.13
CSTF2-201ENST00000372972 FGFR2P21802 821 aa15.87■□□□□ 0.13
CSTF2-201ENST00000372972 FGD1P98174 961 aa15.87■□□□□ 0.13
CSTF2-201ENST00000372972 EXOSC10Q01780 885 aaKnown RBP15.87■□□□□ 0.13
CSTF2-201ENST00000372972 CCDC152Q4G0S7 254 aa15.87■□□□□ 0.13
CSTF2-201ENST00000372972 CCDC102BQ68D86 513 aa15.87■□□□□ 0.13
CSTF2-201ENST00000372972 ZNF772Q68DY9 489 aaPredicted RBP15.87■□□□□ 0.13
CSTF2-201ENST00000372972 GTF3C6Q969F1 213 aa15.87■□□□□ 0.13
CSTF2-201ENST00000372972 MPHOSPH8Q99549 860 aa15.87■□□□□ 0.13
CSTF2-201ENST00000372972 BCL2L12Q9HB09 334 aa15.87■□□□□ 0.13
CSTF2-201ENST00000372972 SRP68Q9UHB9 627 aaKnown RBP15.87■□□□□ 0.13
CSTF2-201ENST00000372972 NARFQ9UHQ1 456 aa15.87■□□□□ 0.13
CSTF2-201ENST00000372972 RTCBQ9Y3I0 505 aaKnown RBP15.87■□□□□ 0.13
CSTF2-201ENST00000372972 VPS37CA5D8V6 355 aaPredicted RBP15.87■□□□□ 0.13
CSTF2-201ENST00000372972 AMIGO3Q86WK7 504 aa15.87■□□□□ 0.13
CSTF2-201ENST00000372972 BRF1Q92994 677 aa15.87■□□□□ 0.13
CSTF2-201ENST00000372972 SYAP1Q96A49 352 aaPredicted RBP15.87■□□□□ 0.13
CSTF2-201ENST00000372972 SCN7AQ01118 1682 aa15.87■□□□□ 0.13
CSTF2-201ENST00000372972 DDX60Q8IY21 1712 aaKnown RBP15.87■□□□□ 0.13
CSTF2-201ENST00000372972 RGL2O15211 777 aa15.86■□□□□ 0.13
CSTF2-201ENST00000372972 GADD45BO75293 160 aaPredicted RBP15.86■□□□□ 0.13
CSTF2-201ENST00000372972 ARID4AP29374 1257 aaPredicted RBP15.86■□□□□ 0.13
CSTF2-201ENST00000372972 RBM6P78332 1123 aaKnown RBP15.86■□□□□ 0.13
CSTF2-201ENST00000372972 CSPP1Q1MSJ5 1256 aa15.86■□□□□ 0.13
CSTF2-201ENST00000372972 PUS7LQ9H0K6 701 aaKnown RBP15.86■□□□□ 0.13
CSTF2-201ENST00000372972 LRRC4BQ9NT99 713 aa15.86■□□□□ 0.13
CSTF2-201ENST00000372972 C4BP0C0L5 1744 aa15.86■□□□□ 0.13
CSTF2-201ENST00000372972 TRIM37O94972 964 aa15.86■□□□□ 0.13
CSTF2-201ENST00000372972 SLC5A1P13866 664 aa15.86■□□□□ 0.13
CSTF2-201ENST00000372972 PHKA1P46020 1223 aa15.86■□□□□ 0.13
CSTF2-201ENST00000372972 TBC1D9BQ66K14 1250 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms