RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 CDC5LQ99459 802 aaKnown RBP18.83■□□□□ 0.6
LMO4-201ENST00000370542 ANKIB1Q9P2G1 1089 aa18.83■□□□□ 0.6
LMO4-201ENST00000370542 PSME4Q14997 1843 aa18.83■□□□□ 0.6
LMO4-201ENST00000370542 EGFRP00533 1210 aa18.82■□□□□ 0.6
LMO4-201ENST00000370542 ATP2B4P23634 1241 aa18.82■□□□□ 0.6
LMO4-201ENST00000370542 GCKRQ14397 625 aa18.82■□□□□ 0.6
LMO4-201ENST00000370542 SAMD7Q7Z3H4 446 aa18.82■□□□□ 0.6
LMO4-201ENST00000370542 ZIC5Q96T25 663 aa18.82■□□□□ 0.6
LMO4-201ENST00000370542 GREM2Q9H772 168 aa18.82■□□□□ 0.6
LMO4-201ENST00000370542 CELF2O95319 508 aaKnown RBP18.81■□□□□ 0.6
LMO4-201ENST00000370542 CSF1RP07333 972 aa18.81■□□□□ 0.6
LMO4-201ENST00000370542 NOGQ13253 232 aa18.81■□□□□ 0.6
LMO4-201ENST00000370542 AGBL3Q8NEM8 1001 aa18.81■□□□□ 0.6
LMO4-201ENST00000370542 CCDC85AQ96PX6 553 aaPredicted RBP18.81■□□□□ 0.6
LMO4-201ENST00000370542 GMLQ99445 158 aa18.81■□□□□ 0.6
LMO4-201ENST00000370542 MINPP1Q9UNW1 487 aa18.81■□□□□ 0.6
LMO4-201ENST00000370542 ZNF280AP59817 542 aaPredicted RBP18.8■□□□□ 0.6
LMO4-201ENST00000370542 PODNQ7Z5L7 613 aa18.8■□□□□ 0.6
LMO4-201ENST00000370542 LINS1Q8NG48 757 aa18.8■□□□□ 0.6
LMO4-201ENST00000370542 DNAAF4Q8WXU2 420 aa18.8■□□□□ 0.6
LMO4-201ENST00000370542 SPINK5Q9NQ38 1064 aaPredicted RBP18.8■□□□□ 0.6
LMO4-201ENST00000370542 SAGE1Q9NXZ1 904 aa18.8■□□□□ 0.6
LMO4-201ENST00000370542 POLR2AP24928 1970 aaKnown RBP18.8■□□□□ 0.6
LMO4-201ENST00000370542 EXOSC9Q06265 439 aaKnown RBP18.79■□□□□ 0.6
LMO4-201ENST00000370542 MED23Q9ULK4 1368 aa18.79■□□□□ 0.6
LMO4-201ENST00000370542 TBC1D10BQ4KMP7 808 aaPredicted RBP18.78■□□□□ 0.6
LMO4-201ENST00000370542 RSBN1LQ6PCB5 846 aaPredicted RBP18.78■□□□□ 0.6
LMO4-201ENST00000370542 UBE3BQ7Z3V4 1068 aa18.78■□□□□ 0.6
LMO4-201ENST00000370542 USP48Q86UV5 1035 aa18.78■□□□□ 0.6
LMO4-201ENST00000370542 WTIPA6NIX2 430 aaPredicted RBP18.77■□□□□ 0.6
LMO4-201ENST00000370542 FKBP5Q13451 457 aaPredicted RBP18.77■□□□□ 0.6
LMO4-201ENST00000370542 MYH16Q9H6N6 1097 aa18.77■□□□□ 0.6
LMO4-201ENST00000370542 CCT4P50991 539 aaKnown RBP18.76■□□□□ 0.59
LMO4-201ENST00000370542 NBR1Q14596 966 aa18.76■□□□□ 0.59
LMO4-201ENST00000370542 DDRGK1Q96HY6 314 aa18.76■□□□□ 0.59
LMO4-201ENST00000370542 LEMD3Q9Y2U8 911 aa18.76■□□□□ 0.59
LMO4-201ENST00000370542 ZNF646O15015 1829 aaPredicted RBP18.76■□□□□ 0.59
LMO4-201ENST00000370542 ZNF521Q96K83 1311 aa18.75■□□□□ 0.59
LMO4-201ENST00000370542 KIF4BQ2VIQ3 1234 aa18.75■□□□□ 0.59
LMO4-201ENST00000370542 BEND3Q5T5X7 828 aa18.75■□□□□ 0.59
LMO4-201ENST00000370542 KRT26Q7Z3Y9 468 aa18.75■□□□□ 0.59
LMO4-201ENST00000370542 CTU1Q7Z7A3 348 aaKnown RBP18.75■□□□□ 0.59
LMO4-201ENST00000370542 USP17L3A6NCW0 530 aa18.74■□□□□ 0.59
LMO4-201ENST00000370542 USP17L4A6NCW7 530 aa18.74■□□□□ 0.59
LMO4-201ENST00000370542 ITGA6P23229 1130 aa18.74■□□□□ 0.59
LMO4-201ENST00000370542 DLK2Q6UY11 383 aa18.74■□□□□ 0.59
LMO4-201ENST00000370542 USP17L1Q7RTZ2 530 aa18.74■□□□□ 0.59
LMO4-201ENST00000370542 DCPSQ96C86 337 aaKnown RBP18.74■□□□□ 0.59
LMO4-201ENST00000370542 HPS5Q9UPZ3 1129 aa18.74■□□□□ 0.59
LMO4-201ENST00000370542 SALL2Q9Y467 1007 aaPredicted RBP18.74■□□□□ 0.59
LMO4-201ENST00000370542 FAM155AB1AL88 458 aaPredicted RBP18.73■□□□□ 0.59
LMO4-201ENST00000370542 G3V3G9 751 aa18.73■□□□□ 0.59
LMO4-201ENST00000370542 IGHMBP2P38935 993 aaKnown RBP18.73■□□□□ 0.59
LMO4-201ENST00000370542 DCAF8Q5TAQ9 597 aa18.73■□□□□ 0.59
LMO4-201ENST00000370542 COA1Q9GZY4 146 aa18.73■□□□□ 0.59
LMO4-201ENST00000370542 SPEF2Q9C093 1822 aa18.72■□□□□ 0.59
LMO4-201ENST00000370542 USP17L8P0C7I0 530 aa18.72■□□□□ 0.59
LMO4-201ENST00000370542 MMP14P50281 582 aa18.72■□□□□ 0.59
LMO4-201ENST00000370542 FOXO4P98177 505 aa18.72■□□□□ 0.59
LMO4-201ENST00000370542 DACT2Q5SW24 774 aa18.72■□□□□ 0.59
LMO4-201ENST00000370542 RBM26Q5T8P6 1007 aaKnown RBP18.72■□□□□ 0.59
LMO4-201ENST00000370542 TXNRD3Q86VQ6 643 aa18.72■□□□□ 0.59
LMO4-201ENST00000370542 ANKRD2Q9GZV1 360 aa18.72■□□□□ 0.59
LMO4-201ENST00000370542 RNF186Q9NXI6 227 aa18.72■□□□□ 0.59
LMO4-201ENST00000370542 PITPNM2Q9BZ72 1349 aa18.72■□□□□ 0.59
LMO4-201ENST00000370542 IRS2Q9Y4H2 1338 aa18.72■□□□□ 0.59
LMO4-201ENST00000370542 ADM5C9JUS6 153 aa18.71■□□□□ 0.59
LMO4-201ENST00000370542 FXR1P51114 621 aaKnown RBP eCLIP18.71■□□□□ 0.59
LMO4-201ENST00000370542 SCARF1Q14162 830 aa18.71■□□□□ 0.59
LMO4-201ENST00000370542 STRIP1Q5VSL9 837 aa18.71■□□□□ 0.59
LMO4-201ENST00000370542 ZNF408Q9H9D4 720 aa18.71■□□□□ 0.59
LMO4-201ENST00000370542 MYOZ2Q9NPC6 264 aa18.71■□□□□ 0.59
LMO4-201ENST00000370542 GGA3Q9NZ52 723 aa18.71■□□□□ 0.59
LMO4-201ENST00000370542 ASTN2O75129 1339 aaPredicted RBP18.71■□□□□ 0.59
LMO4-201ENST00000370542 F6X3S4 739 aa18.7■□□□□ 0.58
LMO4-201ENST00000370542 TRPA1O75762 1119 aa18.7■□□□□ 0.58
LMO4-201ENST00000370542 PRKCSHP14314 528 aaPredicted RBP18.7■□□□□ 0.58
LMO4-201ENST00000370542 HUNKP57058 714 aa18.7■□□□□ 0.58
LMO4-201ENST00000370542 C15orf52Q6ZUT6 534 aaKnown RBP18.7■□□□□ 0.58
LMO4-201ENST00000370542 GBA2Q9HCG7 927 aaPredicted RBP18.7■□□□□ 0.58
LMO4-201ENST00000370542 ZNF804BA4D1E1 1349 aa18.7■□□□□ 0.58
LMO4-201ENST00000370542 MYO3BQ8WXR4 1341 aa18.7■□□□□ 0.58
LMO4-201ENST00000370542 SULF1Q8IWU6 871 aa18.69■□□□□ 0.58
LMO4-201ENST00000370542 MPHOSPH8Q99549 860 aa18.69■□□□□ 0.58
LMO4-201ENST00000370542 ANKRD18BA2A2Z9 1011 aa18.68■□□□□ 0.58
LMO4-201ENST00000370542 KIF23Q02241 960 aaPredicted RBP18.68■□□□□ 0.58
LMO4-201ENST00000370542 CHRNDQ07001 517 aa18.68■□□□□ 0.58
LMO4-201ENST00000370542 PKN2Q16513 984 aaKnown RBP18.68■□□□□ 0.58
LMO4-201ENST00000370542 RGMBQ6NW40 437 aa18.68■□□□□ 0.58
LMO4-201ENST00000370542 C2orf69Q8N8R5 385 aa18.68■□□□□ 0.58
LMO4-201ENST00000370542 ALDH1L1O75891 902 aa18.67■□□□□ 0.58
LMO4-201ENST00000370542 KLRK1P26718 216 aa18.67■□□□□ 0.58
LMO4-201ENST00000370542 ANGEL2Q5VTE6 544 aaKnown RBP18.67■□□□□ 0.58
LMO4-201ENST00000370542 CDCA5Q96FF9 252 aa18.67■□□□□ 0.58
LMO4-201ENST00000370542 MKI67P46013 3256 aaKnown RBP18.67■□□□□ 0.58
LMO4-201ENST00000370542 GRM8O00222 908 aa18.66■□□□□ 0.58
LMO4-201ENST00000370542 FKBP1BP68106 108 aa18.66■□□□□ 0.58
LMO4-201ENST00000370542 IFIT5Q13325 482 aaKnown RBP18.66■□□□□ 0.58
LMO4-201ENST00000370542 EPHA10Q5JZY3 1008 aa18.66■□□□□ 0.58
LMO4-201ENST00000370542 CCDC102AQ96A19 550 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms