RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 OS9Q13438 667 aaPredicted RBP18.4■□□□□ 0.54
COL9A1-204ENST00000370496 UBE4AQ14139 1066 aa18.4■□□□□ 0.54
COL9A1-204ENST00000370496 POLA2Q14181 598 aa18.4■□□□□ 0.54
COL9A1-204ENST00000370496 CIAPIN1Q6FI81 312 aa18.4■□□□□ 0.54
COL9A1-204ENST00000370496 ZNF804AQ7Z570 1209 aa18.4■□□□□ 0.54
COL9A1-204ENST00000370496 GPC2Q8N158 579 aa18.4■□□□□ 0.54
COL9A1-204ENST00000370496 MYH13Q9UKX3 1938 aa18.39■□□□□ 0.54
COL9A1-204ENST00000370496 HMMRO75330 724 aa18.39■□□□□ 0.53
COL9A1-204ENST00000370496 TXNRD3Q86VQ6 643 aa18.39■□□□□ 0.53
COL9A1-204ENST00000370496 CRBNQ96SW2 442 aa18.39■□□□□ 0.53
COL9A1-204ENST00000370496 COA1Q9GZY4 146 aa18.39■□□□□ 0.53
COL9A1-204ENST00000370496 NMRK2Q9NPI5 230 aa18.39■□□□□ 0.53
COL9A1-204ENST00000370496 CEP126Q9P2H0 1117 aa18.39■□□□□ 0.53
COL9A1-204ENST00000370496 SUPT16HQ9Y5B9 1047 aaKnown RBP18.39■□□□□ 0.53
COL9A1-204ENST00000370496 ZNF646O15015 1829 aaPredicted RBP18.39■□□□□ 0.53
COL9A1-204ENST00000370496 SLC5A1P13866 664 aa18.38■□□□□ 0.53
COL9A1-204ENST00000370496 CXCL9Q07325 125 aa18.38■□□□□ 0.53
COL9A1-204ENST00000370496 G3BP1Q13283 466 aaKnown RBP eCLIP18.38■□□□□ 0.53
COL9A1-204ENST00000370496 TNIP1Q15025 636 aa18.38■□□□□ 0.53
COL9A1-204ENST00000370496 C15orf52Q6ZUT6 534 aaKnown RBP18.38■□□□□ 0.53
COL9A1-204ENST00000370496 RPAP2Q8IXW5 612 aaPredicted RBP18.38■□□□□ 0.53
COL9A1-204ENST00000370496 FBXW7Q969H0 707 aa18.38■□□□□ 0.53
COL9A1-204ENST00000370496 IRS2Q9Y4H2 1338 aa18.37■□□□□ 0.53
COL9A1-204ENST00000370496 IFIT1P09914 478 aaKnown RBP18.37■□□□□ 0.53
COL9A1-204ENST00000370496 ATP2B3Q16720 1220 aa18.37■□□□□ 0.53
COL9A1-204ENST00000370496 PODNQ7Z5L7 613 aa18.37■□□□□ 0.53
COL9A1-204ENST00000370496 ZNF609O15014 1411 aa18.36■□□□□ 0.53
COL9A1-204ENST00000370496 IQCA1LA6NCM1 817 aa18.36■□□□□ 0.53
COL9A1-204ENST00000370496 PSMD14O00487 310 aa18.36■□□□□ 0.53
COL9A1-204ENST00000370496 SURF6O75683 361 aaKnown RBP18.36■□□□□ 0.53
COL9A1-204ENST00000370496 LMOD1P29536 600 aaPredicted RBP18.36■□□□□ 0.53
COL9A1-204ENST00000370496 VPS37DQ86XT2 251 aa18.36■□□□□ 0.53
COL9A1-204ENST00000370496 LPIN2Q92539 896 aa18.36■□□□□ 0.53
COL9A1-204ENST00000370496 L3MBTL3Q96JM7 780 aaPredicted RBP18.36■□□□□ 0.53
COL9A1-204ENST00000370496 RRAGCQ9HB90 399 aa18.36■□□□□ 0.53
COL9A1-204ENST00000370496 GYG1P46976 350 aa18.35■□□□□ 0.53
COL9A1-204ENST00000370496 TFCP2Q12800 502 aa18.35■□□□□ 0.53
COL9A1-204ENST00000370496 CAVIN4Q5BKX8 364 aa18.35■□□□□ 0.53
COL9A1-204ENST00000370496 VEGFAP15692 232 aaPredicted RBP18.34■□□□□ 0.53
COL9A1-204ENST00000370496 FGFR2P21802 821 aa18.34■□□□□ 0.53
COL9A1-204ENST00000370496 GMPSP49915 693 aaPredicted RBP18.34■□□□□ 0.53
COL9A1-204ENST00000370496 C16orf71Q8IYS4 520 aaPredicted RBP18.34■□□□□ 0.53
COL9A1-204ENST00000370496 CD209Q9NNX6 404 aa18.34■□□□□ 0.53
COL9A1-204ENST00000370496 KCNQ5Q9NR82 932 aa18.34■□□□□ 0.53
COL9A1-204ENST00000370496 HACL1Q9UJ83 578 aa18.34■□□□□ 0.53
COL9A1-204ENST00000370496 AKAP2Q9Y2D5 859 aa18.34■□□□□ 0.53
COL9A1-204ENST00000370496 USP17L3A6NCW0 530 aa18.33■□□□□ 0.53
COL9A1-204ENST00000370496 USP17L4A6NCW7 530 aa18.33■□□□□ 0.53
COL9A1-204ENST00000370496 HIBADHP31937 336 aaKnown RBP18.33■□□□□ 0.53
COL9A1-204ENST00000370496 USP17L1Q7RTZ2 530 aa18.33■□□□□ 0.53
COL9A1-204ENST00000370496 EXOC6BQ9Y2D4 811 aa18.33■□□□□ 0.53
COL9A1-204ENST00000370496 SCNN1DP51172 638 aa18.32■□□□□ 0.52
COL9A1-204ENST00000370496 KIF3CO14782 793 aa18.31■□□□□ 0.52
COL9A1-204ENST00000370496 FRAT2O75474 233 aaPredicted RBP18.31■□□□□ 0.52
COL9A1-204ENST00000370496 IL1R1P14778 569 aa18.31■□□□□ 0.52
COL9A1-204ENST00000370496 HSP90AB4PQ58FF6 505 aa18.31■□□□□ 0.52
COL9A1-204ENST00000370496 ERC1Q8IUD2 1116 aa18.31■□□□□ 0.52
COL9A1-204ENST00000370496 SIRT2Q8IXJ6 389 aa18.31■□□□□ 0.52
COL9A1-204ENST00000370496 FAM84BQ96KN1 310 aaPredicted RBP18.31■□□□□ 0.52
COL9A1-204ENST00000370496 NOP58Q9Y2X3 529 aaKnown RBP18.31■□□□□ 0.52
COL9A1-204ENST00000370496 ZBTB12Q9Y330 459 aaPredicted RBP18.31■□□□□ 0.52
COL9A1-204ENST00000370496 A0A1B0GUL7 405 aa18.3■□□□□ 0.52
COL9A1-204ENST00000370496 SASH1O94885 1247 aa18.3■□□□□ 0.52
COL9A1-204ENST00000370496 RPS12P25398 132 aaKnown RBP18.3■□□□□ 0.52
COL9A1-204ENST00000370496 GTF2IP78347 998 aa18.3■□□□□ 0.52
COL9A1-204ENST00000370496 STRIP1Q5VSL9 837 aa18.3■□□□□ 0.52
COL9A1-204ENST00000370496 RSBN1LQ6PCB5 846 aaPredicted RBP18.3■□□□□ 0.52
COL9A1-204ENST00000370496 GPRC5DQ9NZD1 345 aa18.3■□□□□ 0.52
COL9A1-204ENST00000370496 MYO3BQ8WXR4 1341 aa18.3■□□□□ 0.52
COL9A1-204ENST00000370496 POTECB2RU33 542 aa18.3■□□□□ 0.52
COL9A1-204ENST00000370496 VIL1P09327 827 aaKnown RBP18.3■□□□□ 0.52
COL9A1-204ENST00000370496 EPHX2P34913 555 aa18.3■□□□□ 0.52
COL9A1-204ENST00000370496 TTLL5Q6EMB2 1281 aa18.3■□□□□ 0.52
COL9A1-204ENST00000370496 NEUROD6Q96NK8 337 aa18.3■□□□□ 0.52
COL9A1-204ENST00000370496 IQSEC3Q9UPP2 1182 aaPredicted RBP18.3■□□□□ 0.52
COL9A1-204ENST00000370496 APBB1O00213 710 aa18.29■□□□□ 0.52
COL9A1-204ENST00000370496 ADORA1P30542 326 aa18.29■□□□□ 0.52
COL9A1-204ENST00000370496 BCAMP50895 628 aa18.29■□□□□ 0.52
COL9A1-204ENST00000370496 EAPPQ56P03 285 aaPredicted RBP18.29■□□□□ 0.52
COL9A1-204ENST00000370496 DACT2Q5SW24 774 aa18.29■□□□□ 0.52
COL9A1-204ENST00000370496 GORABQ5T7V8 394 aa18.29■□□□□ 0.52
COL9A1-204ENST00000370496 FBXO33Q7Z6M2 555 aa18.29■□□□□ 0.52
COL9A1-204ENST00000370496 MICALL2Q8IY33 904 aa18.29■□□□□ 0.52
COL9A1-204ENST00000370496 TAF1DQ9H5J8 278 aaPredicted RBP18.29■□□□□ 0.52
COL9A1-204ENST00000370496 JAG2Q9Y219 1238 aa18.29■□□□□ 0.52
COL9A1-204ENST00000370496 ADAMTSL1Q8N6G6 1762 aa18.28■□□□□ 0.52
COL9A1-204ENST00000370496 EPS15P42566 896 aa18.28■□□□□ 0.52
COL9A1-204ENST00000370496 IRX6P78412 446 aaPredicted RBP18.28■□□□□ 0.52
COL9A1-204ENST00000370496 CHAF1AQ13111 956 aaPredicted RBP18.28■□□□□ 0.52
COL9A1-204ENST00000370496 AAMPQ13685 434 aa18.28■□□□□ 0.52
COL9A1-204ENST00000370496 TNNI3KQ59H18 835 aa18.28■□□□□ 0.52
COL9A1-204ENST00000370496 AGBL3Q8NEM8 1001 aa18.28■□□□□ 0.52
COL9A1-204ENST00000370496 TDRD7Q8NHU6 1098 aaKnown RBP18.28■□□□□ 0.52
COL9A1-204ENST00000370496 EXOC6Q8TAG9 804 aa18.28■□□□□ 0.52
COL9A1-204ENST00000370496 DPF2Q92785 391 aa18.28■□□□□ 0.52
COL9A1-204ENST00000370496 MXD3Q9BW11 206 aa18.28■□□□□ 0.52
COL9A1-204ENST00000370496 GNL3LQ9NVN8 582 aaKnown RBP18.28■□□□□ 0.52
COL9A1-204ENST00000370496 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.28■□□□□ 0.52
COL9A1-204ENST00000370496 FPGT-TNNI3KV9GXZ4 949 aa18.28■□□□□ 0.52
COL9A1-204ENST00000370496 H7C1D1 291 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms