RNA–Protein interactions for RNA: ENST00000370096.7

COL11A1-203, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene COL11A1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-203ENST00000370096 TSPY3P0CV98 308 aa12.56□□□□□ -0.4
COL11A1-203ENST00000370096 TSPY8P0CW00 308 aa12.56□□□□□ -0.4
COL11A1-203ENST00000370096 PRPHP41219 470 aa12.56□□□□□ -0.4
COL11A1-203ENST00000370096 KRT83P78385 493 aa12.56□□□□□ -0.4
COL11A1-203ENST00000370096 LMBR1Q8WVP7 490 aa12.56□□□□□ -0.4
COL11A1-203ENST00000370096 VTI1AQ96AJ9 217 aa12.56□□□□□ -0.4
COL11A1-203ENST00000370096 ATP6V0A2Q9Y487 856 aa12.56□□□□□ -0.4
COL11A1-203ENST00000370096 IGHDP01880 384 aa12.56□□□□□ -0.4
COL11A1-203ENST00000370096 PPP2R5CQ13362 524 aa12.56□□□□□ -0.4
COL11A1-203ENST00000370096 CCT6BQ92526 530 aa12.56□□□□□ -0.4
COL11A1-203ENST00000370096 CCDC42Q96M95 316 aa12.56□□□□□ -0.4
COL11A1-203ENST00000370096 SBNO2Q9Y2G9 1366 aa12.56□□□□□ -0.4
COL11A1-203ENST00000370096 MCM7P33993 719 aa12.56□□□□□ -0.4
COL11A1-203ENST00000370096 CLCN1P35523 988 aa12.56□□□□□ -0.4
COL11A1-203ENST00000370096 CHST3Q7LGC8 479 aa12.56□□□□□ -0.4
COL11A1-203ENST00000370096 HDXQ7Z353 690 aa12.56□□□□□ -0.4
COL11A1-203ENST00000370096 NEK11Q8NG66 645 aa12.56□□□□□ -0.4
COL11A1-203ENST00000370096 GBP1P32455 592 aa12.56□□□□□ -0.4
COL11A1-203ENST00000370096 FMNL3Q8IVF7 1028 aa12.56□□□□□ -0.4
COL11A1-203ENST00000370096 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.56□□□□□ -0.4
COL11A1-203ENST00000370096 LRRC43Q8N309 656 aa12.55□□□□□ -0.4
COL11A1-203ENST00000370096 DDX27Q96GQ7 796 aaKnown RBP12.55□□□□□ -0.4
COL11A1-203ENST00000370096 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.55□□□□□ -0.4
COL11A1-203ENST00000370096 PPANQ9NQ55 473 aaKnown RBP12.55□□□□□ -0.4
COL11A1-203ENST00000370096 FAM170AA1A519 330 aa12.55□□□□□ -0.4
COL11A1-203ENST00000370096 CASQ2O14958 399 aaPredicted RBP12.55□□□□□ -0.4
COL11A1-203ENST00000370096 SIRT1Q96EB6 747 aa12.55□□□□□ -0.4
COL11A1-203ENST00000370096 STAC3Q96MF2 364 aa12.55□□□□□ -0.4
COL11A1-203ENST00000370096 RAPGEF1Q13905 1077 aa12.55□□□□□ -0.4
COL11A1-203ENST00000370096 DIXDC1Q155Q3 683 aa12.55□□□□□ -0.4
COL11A1-203ENST00000370096 TTC22Q5TAA0 569 aa12.55□□□□□ -0.4
COL11A1-203ENST00000370096 SLF2Q8IX21 1173 aa12.55□□□□□ -0.4
COL11A1-203ENST00000370096 AFAP1L1Q8TED9 768 aa12.55□□□□□ -0.4
COL11A1-203ENST00000370096 MRPS27Q92552 414 aaKnown RBP12.55□□□□□ -0.4
COL11A1-203ENST00000370096 ATP2A2P16615 1042 aaKnown RBP12.54□□□□□ -0.4
COL11A1-203ENST00000370096 CCDC122Q5T0U0 273 aa12.54□□□□□ -0.4
COL11A1-203ENST00000370096 AFAP1Q8N556 730 aa12.54□□□□□ -0.4
COL11A1-203ENST00000370096 ERMNQ8TAM6 284 aa12.54□□□□□ -0.4
COL11A1-203ENST00000370096 CABP5Q9NP86 173 aa12.54□□□□□ -0.4
COL11A1-203ENST00000370096 F8W031 263 aaPredicted RBP12.54□□□□□ -0.4
COL11A1-203ENST00000370096 PSMA7O14818 248 aa12.54□□□□□ -0.4
COL11A1-203ENST00000370096 FAM200AQ8TCP9 573 aa12.54□□□□□ -0.4
COL11A1-203ENST00000370096 VAV2P52735 878 aa12.54□□□□□ -0.4
COL11A1-203ENST00000370096 PPP2R3AQ06190 1150 aa12.54□□□□□ -0.4
COL11A1-203ENST00000370096 TYRO3Q06418 890 aa12.54□□□□□ -0.4
COL11A1-203ENST00000370096 DCAF17Q5H9S7 520 aaPredicted RBP12.54□□□□□ -0.4
COL11A1-203ENST00000370096 TCHPQ9BT92 498 aa12.54□□□□□ -0.4
COL11A1-203ENST00000370096 OGFRQ9NZT2 677 aa12.54□□□□□ -0.4
COL11A1-203ENST00000370096 MTRF1LQ9UGC7 380 aaKnown RBP12.54□□□□□ -0.4
COL11A1-203ENST00000370096 ZBTB43O43298 467 aa12.54□□□□□ -0.4
COL11A1-203ENST00000370096 TRIM27P14373 513 aa12.54□□□□□ -0.4
COL11A1-203ENST00000370096 CCT6AP40227 531 aaKnown RBP12.54□□□□□ -0.4
COL11A1-203ENST00000370096 CACNA2D3Q8IZS8 1091 aa12.54□□□□□ -0.4
COL11A1-203ENST00000370096 ECHDC1Q9NTX5 307 aa12.54□□□□□ -0.4
COL11A1-203ENST00000370096 KRT9P35527 623 aa12.54□□□□□ -0.4
COL11A1-203ENST00000370096 ALDH1L2Q3SY69 923 aa12.54□□□□□ -0.4
COL11A1-203ENST00000370096 WHAMMQ8TF30 809 aa12.54□□□□□ -0.4
COL11A1-203ENST00000370096 ZKSCAN5Q9Y2L8 839 aa12.54□□□□□ -0.4
COL11A1-203ENST00000370096 LMNTD2Q8IXW0 634 aa12.54□□□□□ -0.4
COL11A1-203ENST00000370096 IQSEC3Q9UPP2 1182 aaPredicted RBP12.54□□□□□ -0.4
COL11A1-203ENST00000370096 KRT5P13647 590 aa12.53□□□□□ -0.4
COL11A1-203ENST00000370096 ALDH3A1P30838 453 aa12.53□□□□□ -0.4
COL11A1-203ENST00000370096 RTN1Q16799 776 aa12.53□□□□□ -0.4
COL11A1-203ENST00000370096 KCNG4Q8TDN1 519 aa12.53□□□□□ -0.4
COL11A1-203ENST00000370096 PPP2R5DQ14738 602 aa12.53□□□□□ -0.4
COL11A1-203ENST00000370096 AGTPBP1Q9UPW5 1226 aa12.53□□□□□ -0.4
COL11A1-203ENST00000370096 NKIRAS1Q9NYS0 192 aa12.53□□□□□ -0.4
COL11A1-203ENST00000370096 WDHD1O75717 1129 aaPredicted RBP12.53□□□□□ -0.4
COL11A1-203ENST00000370096 LDHAL6AQ6ZMR3 332 aa12.53□□□□□ -0.4
COL11A1-203ENST00000370096 GPIHBP1Q8IV16 184 aa12.53□□□□□ -0.4
COL11A1-203ENST00000370096 CCDC110Q8TBZ0 833 aa12.53□□□□□ -0.4
COL11A1-203ENST00000370096 ZNF853P0CG23 659 aa12.53□□□□□ -0.4
COL11A1-203ENST00000370096 PICALMQ13492 652 aa12.53□□□□□ -0.4
COL11A1-203ENST00000370096 EVCP57679 992 aa12.53□□□□□ -0.4
COL11A1-203ENST00000370096 TBC1D32Q96NH3 1257 aa12.53□□□□□ -0.4
COL11A1-203ENST00000370096 VCX3BQ9H321 246 aa12.53□□□□□ -0.4
COL11A1-203ENST00000370096 LUC7L2Q9Y383 392 aaKnown RBP12.53□□□□□ -0.4
COL11A1-203ENST00000370096 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.53□□□□□ -0.4
COL11A1-203ENST00000370096 SMARCA2P51531 1590 aa12.52□□□□□ -0.4
COL11A1-203ENST00000370096 NBPF7P0C2Y1 421 aaPredicted RBP12.52□□□□□ -0.4
COL11A1-203ENST00000370096 NAPAP54920 295 aa12.52□□□□□ -0.4
COL11A1-203ENST00000370096 TACC3Q9Y6A5 838 aa12.52□□□□□ -0.4
COL11A1-203ENST00000370096 IMPG2Q9BZV3 1241 aa12.52□□□□□ -0.4
COL11A1-203ENST00000370096 SLC4A4Q9Y6R1 1079 aa12.52□□□□□ -0.4
COL11A1-203ENST00000370096 WDR97A6NE52 1622 aa12.52□□□□□ -0.4
COL11A1-203ENST00000370096 HLA-DOAP06340 250 aa12.52□□□□□ -0.41
COL11A1-203ENST00000370096 PPP1R42Q7Z4L9 355 aa12.52□□□□□ -0.41
COL11A1-203ENST00000370096 SDCCAG8Q86SQ7 713 aaPredicted RBP12.52□□□□□ -0.41
COL11A1-203ENST00000370096 HAUS7Q99871 368 aa12.52□□□□□ -0.41
COL11A1-203ENST00000370096 NUF2Q9BZD4 464 aa12.52□□□□□ -0.41
COL11A1-203ENST00000370096 A0A1B0GUA9 196 aa12.52□□□□□ -0.41
COL11A1-203ENST00000370096 BAG3O95817 575 aa12.52□□□□□ -0.41
COL11A1-203ENST00000370096 UTP14CQ5TAP6 766 aaKnown RBP12.52□□□□□ -0.41
COL11A1-203ENST00000370096 SEL1L2Q5TEA6 688 aa12.52□□□□□ -0.41
COL11A1-203ENST00000370096 CTNND2Q9UQB3 1225 aa12.52□□□□□ -0.41
COL11A1-203ENST00000370096 CLSTN2Q9H4D0 955 aa12.52□□□□□ -0.41
COL11A1-203ENST00000370096 CAVIN2O95810 425 aa12.51□□□□□ -0.41
COL11A1-203ENST00000370096 GRM1Q13255 1194 aa12.51□□□□□ -0.41
COL11A1-203ENST00000370096 FYB2Q5VWT5 728 aa12.51□□□□□ -0.41
COL11A1-203ENST00000370096 TRIM31Q9BZY9 425 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms