RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 CCDC158Q5M9N0 1113 aa12.25□□□□□ -0.45
LYSMD1-201ENST00000368908 ARMCX5Q6P1M9 558 aa12.25□□□□□ -0.45
LYSMD1-201ENST00000368908 UBXN4Q92575 508 aa12.25□□□□□ -0.45
LYSMD1-201ENST00000368908 PIK3C2AO00443 1686 aa12.25□□□□□ -0.45
LYSMD1-201ENST00000368908 EFCAB8A8MWE9 144 aa12.25□□□□□ -0.45
LYSMD1-201ENST00000368908 SOX12O15370 315 aa12.25□□□□□ -0.45
LYSMD1-201ENST00000368908 AACSQ86V21 672 aa12.25□□□□□ -0.45
LYSMD1-201ENST00000368908 FCHSD1Q86WN1 690 aa12.25□□□□□ -0.45
LYSMD1-201ENST00000368908 DNAI1Q9UI46 699 aa12.25□□□□□ -0.45
LYSMD1-201ENST00000368908 CEMIPQ8WUJ3 1361 aa12.24□□□□□ -0.45
LYSMD1-201ENST00000368908 STK3Q13188 491 aa12.24□□□□□ -0.45
LYSMD1-201ENST00000368908 GPS2Q13227 327 aa12.24□□□□□ -0.45
LYSMD1-201ENST00000368908 NUTM2GQ5VZR2 741 aa12.24□□□□□ -0.45
LYSMD1-201ENST00000368908 LRRN4CLQ8ND94 238 aa12.24□□□□□ -0.45
LYSMD1-201ENST00000368908 TCEANC2Q96MN5 208 aa12.23□□□□□ -0.45
LYSMD1-201ENST00000368908 MARF1Q9Y4F3 1742 aaKnown RBP12.23□□□□□ -0.45
LYSMD1-201ENST00000368908 A0A1W2PQ27 194 aa12.23□□□□□ -0.45
LYSMD1-201ENST00000368908 A0A1W2PQ64 194 aa12.23□□□□□ -0.45
LYSMD1-201ENST00000368908 A0A1W2PQD8 194 aa12.23□□□□□ -0.45
LYSMD1-201ENST00000368908 PFKFB2O60825 505 aa12.23□□□□□ -0.45
LYSMD1-201ENST00000368908 LRRFIP1Q32MZ4 808 aaKnown RBP12.23□□□□□ -0.45
LYSMD1-201ENST00000368908 FMR1NBQ8N0W7 255 aaPredicted RBP12.23□□□□□ -0.45
LYSMD1-201ENST00000368908 FSIP1Q8NA03 581 aa12.23□□□□□ -0.45
LYSMD1-201ENST00000368908 NEK1Q96PY6 1258 aa12.23□□□□□ -0.45
LYSMD1-201ENST00000368908 FSD1Q9BTV5 496 aa12.23□□□□□ -0.45
LYSMD1-201ENST00000368908 XPO4Q9C0E2 1151 aaKnown RBP12.23□□□□□ -0.45
LYSMD1-201ENST00000368908 BCL11BQ9C0K0 894 aaPredicted RBP12.23□□□□□ -0.45
LYSMD1-201ENST00000368908 PSD3Q9NYI0 1048 aa12.23□□□□□ -0.45
LYSMD1-201ENST00000368908 PHRF1Q9P1Y6 1649 aaKnown RBP12.23□□□□□ -0.45
LYSMD1-201ENST00000368908 PI4KAP2A4QPH2 592 aa12.22□□□□□ -0.45
LYSMD1-201ENST00000368908 TAF5LO75529 589 aa12.22□□□□□ -0.45
LYSMD1-201ENST00000368908 TMC6Q7Z403 805 aa12.22□□□□□ -0.45
LYSMD1-201ENST00000368908 PI4KAP1Q8N8J0 262 aa12.22□□□□□ -0.45
LYSMD1-201ENST00000368908 MNS1Q8NEH6 495 aa12.22□□□□□ -0.45
LYSMD1-201ENST00000368908 MRPS27Q92552 414 aaKnown RBP12.22□□□□□ -0.45
LYSMD1-201ENST00000368908 TAF6LQ9Y6J9 622 aa12.22□□□□□ -0.45
LYSMD1-201ENST00000368908 LMO7Q8WWI1 1683 aa12.22□□□□□ -0.45
LYSMD1-201ENST00000368908 NPHP1O15259 732 aa12.22□□□□□ -0.45
LYSMD1-201ENST00000368908 EFCC1Q9HA90 598 aa12.22□□□□□ -0.45
LYSMD1-201ENST00000368908 U3KPZ7 1027 aaPredicted RBP12.22□□□□□ -0.45
LYSMD1-201ENST00000368908 AMPHP49418 695 aa12.21□□□□□ -0.45
LYSMD1-201ENST00000368908 EIF4A1P60842 406 aaKnown RBP12.21□□□□□ -0.45
LYSMD1-201ENST00000368908 TRIM65Q6PJ69 517 aa12.21□□□□□ -0.45
LYSMD1-201ENST00000368908 NSUN7Q8NE18 718 aaKnown RBP12.21□□□□□ -0.45
LYSMD1-201ENST00000368908 CHMP4CQ96CF2 233 aa12.21□□□□□ -0.45
LYSMD1-201ENST00000368908 USP28Q96RU2 1077 aa12.21□□□□□ -0.45
LYSMD1-201ENST00000368908 TRIM34Q9BYJ4 488 aa12.21□□□□□ -0.45
LYSMD1-201ENST00000368908 CWC15Q9P013 229 aaKnown RBP12.21□□□□□ -0.45
LYSMD1-201ENST00000368908 IFNKQ9P0W0 207 aa12.21□□□□□ -0.45
LYSMD1-201ENST00000368908 SLIT3O75094 1523 aa12.21□□□□□ -0.45
LYSMD1-201ENST00000368908 SMC2O95347 1197 aa12.21□□□□□ -0.45
LYSMD1-201ENST00000368908 Q6ZUG5 572 aa12.21□□□□□ -0.45
LYSMD1-201ENST00000368908 CHPF2Q9P2E5 772 aa12.21□□□□□ -0.45
LYSMD1-201ENST00000368908 UTYO14607 1347 aa12.2□□□□□ -0.46
LYSMD1-201ENST00000368908 IKBKBO14920 756 aa12.2□□□□□ -0.46
LYSMD1-201ENST00000368908 HMGB1P09429 215 aaKnown RBP12.2□□□□□ -0.46
LYSMD1-201ENST00000368908 HSP90B1P14625 803 aaKnown RBP12.2□□□□□ -0.46
LYSMD1-201ENST00000368908 SCRN1Q12765 414 aa12.2□□□□□ -0.46
LYSMD1-201ENST00000368908 ADALQ6DHV7 355 aa12.2□□□□□ -0.46
LYSMD1-201ENST00000368908 ZNF589Q86UQ0 364 aaPredicted RBP12.2□□□□□ -0.46
LYSMD1-201ENST00000368908 HOMER1Q86YM7 354 aa12.2□□□□□ -0.46
LYSMD1-201ENST00000368908 GPR161Q8N6U8 529 aaKnown RBP12.2□□□□□ -0.46
LYSMD1-201ENST00000368908 IQUBQ8NA54 791 aa12.2□□□□□ -0.46
LYSMD1-201ENST00000368908 EAF2Q96CJ1 260 aaPredicted RBP12.2□□□□□ -0.46
LYSMD1-201ENST00000368908 DDX11Q96FC9 970 aa12.2□□□□□ -0.46
LYSMD1-201ENST00000368908 MPHOSPH8Q99549 860 aa12.2□□□□□ -0.46
LYSMD1-201ENST00000368908 KIAA1468Q9P260 1216 aa12.2□□□□□ -0.46
LYSMD1-201ENST00000368908 SALL1Q9NSC2 1324 aa12.2□□□□□ -0.46
LYSMD1-201ENST00000368908 SASH1O94885 1247 aa12.2□□□□□ -0.46
LYSMD1-201ENST00000368908 TBC1D8O95759 1140 aa12.2□□□□□ -0.46
LYSMD1-201ENST00000368908 OAS2P29728 719 aaKnown RBP12.2□□□□□ -0.46
LYSMD1-201ENST00000368908 NLRP12P59046 1061 aa12.2□□□□□ -0.46
LYSMD1-201ENST00000368908 CC2D1AQ6P1N0 951 aaPredicted RBP12.2□□□□□ -0.46
LYSMD1-201ENST00000368908 NEK11Q8NG66 645 aa12.2□□□□□ -0.46
LYSMD1-201ENST00000368908 TMX1Q9H3N1 280 aa12.2□□□□□ -0.46
LYSMD1-201ENST00000368908 RTEL1Q9NZ71 1219 aa12.2□□□□□ -0.46
LYSMD1-201ENST00000368908 MYO1BO43795 1136 aa12.19□□□□□ -0.46
LYSMD1-201ENST00000368908 G3BP1Q13283 466 aaKnown RBP eCLIP12.19□□□□□ -0.46
LYSMD1-201ENST00000368908 ZRSR1Q15695 479 aaKnown RBP12.19□□□□□ -0.46
LYSMD1-201ENST00000368908 SMARCE1Q969G3 411 aa12.19□□□□□ -0.46
LYSMD1-201ENST00000368908 EXOC4Q96A65 974 aa12.19□□□□□ -0.46
LYSMD1-201ENST00000368908 AK7Q96M32 723 aa12.19□□□□□ -0.46
LYSMD1-201ENST00000368908 RASSF4Q9H2L5 321 aa12.19□□□□□ -0.46
LYSMD1-201ENST00000368908 PA2G4Q9UQ80 394 aaKnown RBP12.19□□□□□ -0.46
LYSMD1-201ENST00000368908 PARP3Q9Y6F1 533 aa12.19□□□□□ -0.46
LYSMD1-201ENST00000368908 NEDD4P46934 1319 aa12.19□□□□□ -0.46
LYSMD1-201ENST00000368908 GOLGA6L9A6NEM1 432 aa12.19□□□□□ -0.46
LYSMD1-201ENST00000368908 ZSCAN12O43309 604 aa12.19□□□□□ -0.46
LYSMD1-201ENST00000368908 CBFA2T2O43439 604 aa12.19□□□□□ -0.46
LYSMD1-201ENST00000368908 ME1P48163 572 aa12.19□□□□□ -0.46
LYSMD1-201ENST00000368908 CEBPZQ03701 1054 aaKnown RBP12.19□□□□□ -0.46
LYSMD1-201ENST00000368908 JAKMIP3Q5VZ66 844 aa12.19□□□□□ -0.46
LYSMD1-201ENST00000368908 KRBA2Q6ZNG9 492 aa12.19□□□□□ -0.46
LYSMD1-201ENST00000368908 GOLGA5Q8TBA6 731 aa12.19□□□□□ -0.46
LYSMD1-201ENST00000368908 AGXT2Q9BYV1 514 aa12.19□□□□□ -0.46
LYSMD1-201ENST00000368908 C9orf78Q9NZ63 289 aaPredicted RBP12.19□□□□□ -0.46
LYSMD1-201ENST00000368908 LRP6O75581 1613 aa12.19□□□□□ -0.46
LYSMD1-201ENST00000368908 PTPDC1A2A3K4 754 aa12.18□□□□□ -0.46
LYSMD1-201ENST00000368908 POLR3GO15318 223 aaPredicted RBP12.18□□□□□ -0.46
LYSMD1-201ENST00000368908 EVCP57679 992 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms