RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 CCDC158Q5M9N0 1113 aa12.25□□□□□ -0.45
LYSMD1-201ENST00000368908 ARMCX5Q6P1M9 558 aa12.25□□□□□ -0.45
LYSMD1-201ENST00000368908 UBXN4Q92575 508 aa12.25□□□□□ -0.45
LYSMD1-201ENST00000368908 PIK3C2AO00443 1686 aa12.25□□□□□ -0.45
LYSMD1-201ENST00000368908 EFCAB8A8MWE9 144 aa12.25□□□□□ -0.45
LYSMD1-201ENST00000368908 SOX12O15370 315 aa12.25□□□□□ -0.45
LYSMD1-201ENST00000368908 AACSQ86V21 672 aa12.25□□□□□ -0.45
LYSMD1-201ENST00000368908 FCHSD1Q86WN1 690 aa12.25□□□□□ -0.45
LYSMD1-201ENST00000368908 DNAI1Q9UI46 699 aa12.25□□□□□ -0.45
LYSMD1-201ENST00000368908 CEMIPQ8WUJ3 1361 aa12.24□□□□□ -0.45
LYSMD1-201ENST00000368908 STK3Q13188 491 aa12.24□□□□□ -0.45
LYSMD1-201ENST00000368908 GPS2Q13227 327 aa12.24□□□□□ -0.45
LYSMD1-201ENST00000368908 NUTM2GQ5VZR2 741 aa12.24□□□□□ -0.45
LYSMD1-201ENST00000368908 LRRN4CLQ8ND94 238 aa12.24□□□□□ -0.45
LYSMD1-201ENST00000368908 TCEANC2Q96MN5 208 aa12.23□□□□□ -0.45
LYSMD1-201ENST00000368908 MARF1Q9Y4F3 1742 aaKnown RBP12.23□□□□□ -0.45
LYSMD1-201ENST00000368908 A0A1W2PQ27 194 aa12.23□□□□□ -0.45
LYSMD1-201ENST00000368908 A0A1W2PQ64 194 aa12.23□□□□□ -0.45
LYSMD1-201ENST00000368908 A0A1W2PQD8 194 aa12.23□□□□□ -0.45
LYSMD1-201ENST00000368908 PFKFB2O60825 505 aa12.23□□□□□ -0.45
LYSMD1-201ENST00000368908 LRRFIP1Q32MZ4 808 aaKnown RBP12.23□□□□□ -0.45
LYSMD1-201ENST00000368908 FMR1NBQ8N0W7 255 aaPredicted RBP12.23□□□□□ -0.45
LYSMD1-201ENST00000368908 FSIP1Q8NA03 581 aa12.23□□□□□ -0.45
LYSMD1-201ENST00000368908 NEK1Q96PY6 1258 aa12.23□□□□□ -0.45
LYSMD1-201ENST00000368908 FSD1Q9BTV5 496 aa12.23□□□□□ -0.45
LYSMD1-201ENST00000368908 XPO4Q9C0E2 1151 aaKnown RBP12.23□□□□□ -0.45
LYSMD1-201ENST00000368908 BCL11BQ9C0K0 894 aaPredicted RBP12.23□□□□□ -0.45
LYSMD1-201ENST00000368908 PSD3Q9NYI0 1048 aa12.23□□□□□ -0.45
LYSMD1-201ENST00000368908 PHRF1Q9P1Y6 1649 aaKnown RBP12.23□□□□□ -0.45
LYSMD1-201ENST00000368908 PI4KAP2A4QPH2 592 aa12.22□□□□□ -0.45
LYSMD1-201ENST00000368908 TAF5LO75529 589 aa12.22□□□□□ -0.45
LYSMD1-201ENST00000368908 TMC6Q7Z403 805 aa12.22□□□□□ -0.45
LYSMD1-201ENST00000368908 PI4KAP1Q8N8J0 262 aa12.22□□□□□ -0.45
LYSMD1-201ENST00000368908 MNS1Q8NEH6 495 aa12.22□□□□□ -0.45
LYSMD1-201ENST00000368908 MRPS27Q92552 414 aaKnown RBP12.22□□□□□ -0.45
LYSMD1-201ENST00000368908 TAF6LQ9Y6J9 622 aa12.22□□□□□ -0.45
LYSMD1-201ENST00000368908 LMO7Q8WWI1 1683 aa12.22□□□□□ -0.45
LYSMD1-201ENST00000368908 NPHP1O15259 732 aa12.22□□□□□ -0.45
LYSMD1-201ENST00000368908 EFCC1Q9HA90 598 aa12.22□□□□□ -0.45
LYSMD1-201ENST00000368908 U3KPZ7 1027 aaPredicted RBP12.22□□□□□ -0.45
LYSMD1-201ENST00000368908 AMPHP49418 695 aa12.21□□□□□ -0.45
LYSMD1-201ENST00000368908 EIF4A1P60842 406 aaKnown RBP12.21□□□□□ -0.45
LYSMD1-201ENST00000368908 TRIM65Q6PJ69 517 aa12.21□□□□□ -0.45
LYSMD1-201ENST00000368908 NSUN7Q8NE18 718 aaKnown RBP12.21□□□□□ -0.45
LYSMD1-201ENST00000368908 CHMP4CQ96CF2 233 aa12.21□□□□□ -0.45
LYSMD1-201ENST00000368908 USP28Q96RU2 1077 aa12.21□□□□□ -0.45
LYSMD1-201ENST00000368908 TRIM34Q9BYJ4 488 aa12.21□□□□□ -0.45
LYSMD1-201ENST00000368908 CWC15Q9P013 229 aaKnown RBP12.21□□□□□ -0.45
LYSMD1-201ENST00000368908 IFNKQ9P0W0 207 aa12.21□□□□□ -0.45
LYSMD1-201ENST00000368908 SLIT3O75094 1523 aa12.21□□□□□ -0.45
LYSMD1-201ENST00000368908 SMC2O95347 1197 aa12.21□□□□□ -0.45
LYSMD1-201ENST00000368908 Q6ZUG5 572 aa12.21□□□□□ -0.45
LYSMD1-201ENST00000368908 CHPF2Q9P2E5 772 aa12.21□□□□□ -0.45
LYSMD1-201ENST00000368908 UTYO14607 1347 aa12.2□□□□□ -0.46
LYSMD1-201ENST00000368908 IKBKBO14920 756 aa12.2□□□□□ -0.46
LYSMD1-201ENST00000368908 HMGB1P09429 215 aaKnown RBP12.2□□□□□ -0.46
LYSMD1-201ENST00000368908 HSP90B1P14625 803 aaKnown RBP12.2□□□□□ -0.46
LYSMD1-201ENST00000368908 SCRN1Q12765 414 aa12.2□□□□□ -0.46
LYSMD1-201ENST00000368908 ADALQ6DHV7 355 aa12.2□□□□□ -0.46
LYSMD1-201ENST00000368908 ZNF589Q86UQ0 364 aaPredicted RBP12.2□□□□□ -0.46
LYSMD1-201ENST00000368908 HOMER1Q86YM7 354 aa12.2□□□□□ -0.46
LYSMD1-201ENST00000368908 GPR161Q8N6U8 529 aaKnown RBP12.2□□□□□ -0.46
LYSMD1-201ENST00000368908 IQUBQ8NA54 791 aa12.2□□□□□ -0.46
LYSMD1-201ENST00000368908 EAF2Q96CJ1 260 aaPredicted RBP12.2□□□□□ -0.46
LYSMD1-201ENST00000368908 DDX11Q96FC9 970 aa12.2□□□□□ -0.46
LYSMD1-201ENST00000368908 MPHOSPH8Q99549 860 aa12.2□□□□□ -0.46
LYSMD1-201ENST00000368908 KIAA1468Q9P260 1216 aa12.2□□□□□ -0.46
LYSMD1-201ENST00000368908 SALL1Q9NSC2 1324 aa12.2□□□□□ -0.46
LYSMD1-201ENST00000368908 SASH1O94885 1247 aa12.2□□□□□ -0.46
LYSMD1-201ENST00000368908 TBC1D8O95759 1140 aa12.2□□□□□ -0.46
LYSMD1-201ENST00000368908 OAS2P29728 719 aaKnown RBP12.2□□□□□ -0.46
LYSMD1-201ENST00000368908 NLRP12P59046 1061 aa12.2□□□□□ -0.46
LYSMD1-201ENST00000368908 CC2D1AQ6P1N0 951 aaPredicted RBP12.2□□□□□ -0.46
LYSMD1-201ENST00000368908 NEK11Q8NG66 645 aa12.2□□□□□ -0.46
LYSMD1-201ENST00000368908 TMX1Q9H3N1 280 aa12.2□□□□□ -0.46
LYSMD1-201ENST00000368908 RTEL1Q9NZ71 1219 aa12.2□□□□□ -0.46
LYSMD1-201ENST00000368908 MYO1BO43795 1136 aa12.19□□□□□ -0.46
LYSMD1-201ENST00000368908 G3BP1Q13283 466 aaKnown RBP eCLIP12.19□□□□□ -0.46
LYSMD1-201ENST00000368908 ZRSR1Q15695 479 aaKnown RBP12.19□□□□□ -0.46
LYSMD1-201ENST00000368908 SMARCE1Q969G3 411 aa12.19□□□□□ -0.46
LYSMD1-201ENST00000368908 EXOC4Q96A65 974 aa12.19□□□□□ -0.46
LYSMD1-201ENST00000368908 AK7Q96M32 723 aa12.19□□□□□ -0.46
LYSMD1-201ENST00000368908 RASSF4Q9H2L5 321 aa12.19□□□□□ -0.46
LYSMD1-201ENST00000368908 PA2G4Q9UQ80 394 aaKnown RBP12.19□□□□□ -0.46
LYSMD1-201ENST00000368908 PARP3Q9Y6F1 533 aa12.19□□□□□ -0.46
LYSMD1-201ENST00000368908 NEDD4P46934 1319 aa12.19□□□□□ -0.46
LYSMD1-201ENST00000368908 GOLGA6L9A6NEM1 432 aa12.19□□□□□ -0.46
LYSMD1-201ENST00000368908 ZSCAN12O43309 604 aa12.19□□□□□ -0.46
LYSMD1-201ENST00000368908 CBFA2T2O43439 604 aa12.19□□□□□ -0.46
LYSMD1-201ENST00000368908 ME1P48163 572 aa12.19□□□□□ -0.46
LYSMD1-201ENST00000368908 CEBPZQ03701 1054 aaKnown RBP12.19□□□□□ -0.46
LYSMD1-201ENST00000368908 JAKMIP3Q5VZ66 844 aa12.19□□□□□ -0.46
LYSMD1-201ENST00000368908 KRBA2Q6ZNG9 492 aa12.19□□□□□ -0.46
LYSMD1-201ENST00000368908 GOLGA5Q8TBA6 731 aa12.19□□□□□ -0.46
LYSMD1-201ENST00000368908 AGXT2Q9BYV1 514 aa12.19□□□□□ -0.46
LYSMD1-201ENST00000368908 C9orf78Q9NZ63 289 aaPredicted RBP12.19□□□□□ -0.46
LYSMD1-201ENST00000368908 LRP6O75581 1613 aa12.19□□□□□ -0.46
LYSMD1-201ENST00000368908 PTPDC1A2A3K4 754 aa12.18□□□□□ -0.46
LYSMD1-201ENST00000368908 POLR3GO15318 223 aaPredicted RBP12.18□□□□□ -0.46
LYSMD1-201ENST00000368908 EVCP57679 992 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms