RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 TIMM10P62072 90 aa17.16■□□□□ 0.34
TPM3-211ENST00000368531 KIAA2012Q0VF49 1180 aa17.16■□□□□ 0.34
TPM3-211ENST00000368531 ERC1Q8IUD2 1116 aa17.16■□□□□ 0.34
TPM3-211ENST00000368531 NEUROD6Q96NK8 337 aa17.16■□□□□ 0.34
TPM3-211ENST00000368531 DCTPP1Q9H773 170 aa17.16■□□□□ 0.34
TPM3-211ENST00000368531 DBNDD1Q9H9R9 158 aa17.16■□□□□ 0.34
TPM3-211ENST00000368531 IL1RAPL2Q9NP60 686 aa17.16■□□□□ 0.34
TPM3-211ENST00000368531 IFIT1P09914 478 aaKnown RBP17.15■□□□□ 0.34
TPM3-211ENST00000368531 HDAC1Q13547 482 aaPredicted RBP17.15■□□□□ 0.34
TPM3-211ENST00000368531 NIM1KQ8IY84 436 aa17.15■□□□□ 0.34
TPM3-211ENST00000368531 RHPN1Q8TCX5 695 aa17.15■□□□□ 0.34
TPM3-211ENST00000368531 JDP2Q8WYK2 163 aa17.15■□□□□ 0.34
TPM3-211ENST00000368531 AKAP2Q9Y2D5 859 aa17.15■□□□□ 0.34
TPM3-211ENST00000368531 COL4A5P29400 1685 aa17.15■□□□□ 0.34
TPM3-211ENST00000368531 TIAM2Q8IVF5 1701 aa17.15■□□□□ 0.34
TPM3-211ENST00000368531 A0A1B0GUL7 405 aa17.14■□□□□ 0.33
TPM3-211ENST00000368531 SMARCA5O60264 1052 aaPredicted RBP17.14■□□□□ 0.33
TPM3-211ENST00000368531 RAB11FIP3O75154 756 aa17.14■□□□□ 0.33
TPM3-211ENST00000368531 FGFR2P21802 821 aa17.14■□□□□ 0.33
TPM3-211ENST00000368531 ADORA1P30542 326 aa17.14■□□□□ 0.33
TPM3-211ENST00000368531 GYG1P46976 350 aa17.14■□□□□ 0.33
TPM3-211ENST00000368531 LPIN2Q92539 896 aa17.14■□□□□ 0.33
TPM3-211ENST00000368531 KIF1BPQ96EK5 621 aa17.14■□□□□ 0.33
TPM3-211ENST00000368531 MED23Q9ULK4 1368 aa17.14■□□□□ 0.33
TPM3-211ENST00000368531 TNNI3KQ59H18 835 aa17.13■□□□□ 0.33
TPM3-211ENST00000368531 VPS33BQ9H267 617 aa17.13■□□□□ 0.33
TPM3-211ENST00000368531 FPGT-TNNI3KV9GXZ4 949 aa17.13■□□□□ 0.33
TPM3-211ENST00000368531 ECE2O60344 883 aa17.12■□□□□ 0.33
TPM3-211ENST00000368531 BCAMP50895 628 aa17.12■□□□□ 0.33
TPM3-211ENST00000368531 B4GALNT3Q6L9W6 998 aa17.12■□□□□ 0.33
TPM3-211ENST00000368531 AACSQ86V21 672 aa17.12■□□□□ 0.33
TPM3-211ENST00000368531 VPS37DQ86XT2 251 aa17.12■□□□□ 0.33
TPM3-211ENST00000368531 LRRCC1Q9C099 1032 aa17.12■□□□□ 0.33
TPM3-211ENST00000368531 CCDC8Q9H0W5 538 aaPredicted RBP17.12■□□□□ 0.33
TPM3-211ENST00000368531 IRS2Q9Y4H2 1338 aa17.12■□□□□ 0.33
TPM3-211ENST00000368531 ZNF609O15014 1411 aa17.12■□□□□ 0.33
TPM3-211ENST00000368531 ARAP2Q8WZ64 1704 aa17.11■□□□□ 0.33
TPM3-211ENST00000368531 HIBADHP31937 336 aaKnown RBP17.11■□□□□ 0.33
TPM3-211ENST00000368531 CAVIN4Q5BKX8 364 aa17.11■□□□□ 0.33
TPM3-211ENST00000368531 GORABQ5T7V8 394 aa17.11■□□□□ 0.33
TPM3-211ENST00000368531 ANKRD45Q5TZF3 282 aa17.11■□□□□ 0.33
TPM3-211ENST00000368531 C15orf52Q6ZUT6 534 aaKnown RBP17.11■□□□□ 0.33
TPM3-211ENST00000368531 ZNF804AQ7Z570 1209 aa17.11■□□□□ 0.33
TPM3-211ENST00000368531 FBXW7Q969H0 707 aa17.11■□□□□ 0.33
TPM3-211ENST00000368531 EAF2Q96CJ1 260 aaPredicted RBP17.11■□□□□ 0.33
TPM3-211ENST00000368531 XAGE2Q96GT9 111 aa17.11■□□□□ 0.33
TPM3-211ENST00000368531 FAM84BQ96KN1 310 aaPredicted RBP17.11■□□□□ 0.33
TPM3-211ENST00000368531 KCNQ5Q9NR82 932 aa17.11■□□□□ 0.33
TPM3-211ENST00000368531 ZNRF3Q9ULT6 936 aa17.11■□□□□ 0.33
TPM3-211ENST00000368531 IQSEC3Q9UPP2 1182 aaPredicted RBP17.11■□□□□ 0.33
TPM3-211ENST00000368531 MYH13Q9UKX3 1938 aa17.1■□□□□ 0.33
TPM3-211ENST00000368531 YDJCA8MPS7 323 aa17.1■□□□□ 0.33
TPM3-211ENST00000368531 RAD17O75943 681 aa17.1■□□□□ 0.33
TPM3-211ENST00000368531 CLASRPQ8N2M8 674 aaKnown RBP17.1■□□□□ 0.33
TPM3-211ENST00000368531 GCC1Q96CN9 775 aa17.1■□□□□ 0.33
TPM3-211ENST00000368531 COA1Q9GZY4 146 aa17.1■□□□□ 0.33
TPM3-211ENST00000368531 CD209Q9NNX6 404 aa17.1■□□□□ 0.33
TPM3-211ENST00000368531 ZBTB47Q9UFB7 747 aaPredicted RBP17.1■□□□□ 0.33
TPM3-211ENST00000368531 SCN9AQ15858 1988 aa17.09■□□□□ 0.33
TPM3-211ENST00000368531 FRAT2O75474 233 aaPredicted RBP17.09■□□□□ 0.33
TPM3-211ENST00000368531 PHKA1P46020 1223 aa17.09■□□□□ 0.33
TPM3-211ENST00000368531 EIF6P56537 245 aaKnown RBP17.09■□□□□ 0.33
TPM3-211ENST00000368531 FBXO33Q7Z6M2 555 aa17.09■□□□□ 0.33
TPM3-211ENST00000368531 DBNDD2Q9BQY9 259 aa17.09■□□□□ 0.33
TPM3-211ENST00000368531 GPR108Q9NPR9 543 aa17.09■□□□□ 0.33
TPM3-211ENST00000368531 TLR7Q9NYK1 1049 aaKnown RBP17.09■□□□□ 0.33
TPM3-211ENST00000368531 JAG2Q9Y219 1238 aa17.09■□□□□ 0.33
TPM3-211ENST00000368531 ZNF541Q9H0D2 1346 aa17.08■□□□□ 0.32
TPM3-211ENST00000368531 FZD9O00144 591 aa17.08■□□□□ 0.32
TPM3-211ENST00000368531 IFIT2P09913 472 aaKnown RBP17.08■□□□□ 0.32
TPM3-211ENST00000368531 CCDC136Q96JN2 1154 aa17.08■□□□□ 0.32
TPM3-211ENST00000368531 GJA3Q9Y6H8 435 aa17.08■□□□□ 0.32
TPM3-211ENST00000368531 CXCL9Q07325 125 aa17.07■□□□□ 0.32
TPM3-211ENST00000368531 CCDC102BQ68D86 513 aa17.07■□□□□ 0.32
TPM3-211ENST00000368531 PODNQ7Z5L7 613 aa17.07■□□□□ 0.32
TPM3-211ENST00000368531 SMC5Q8IY18 1101 aa17.07■□□□□ 0.32
TPM3-211ENST00000368531 DBNLQ9UJU6 430 aaKnown RBP17.07■□□□□ 0.32
TPM3-211ENST00000368531 GOLGB1Q14789 3259 aaKnown RBP17.06■□□□□ 0.32
TPM3-211ENST00000368531 GTF2IP78347 998 aa17.06■□□□□ 0.32
TPM3-211ENST00000368531 CHAF1AQ13111 956 aaPredicted RBP17.06■□□□□ 0.32
TPM3-211ENST00000368531 CIAPIN1Q6FI81 312 aa17.06■□□□□ 0.32
TPM3-211ENST00000368531 C16orf71Q8IYS4 520 aaPredicted RBP17.06■□□□□ 0.32
TPM3-211ENST00000368531 TDRD7Q8NHU6 1098 aaKnown RBP17.06■□□□□ 0.32
TPM3-211ENST00000368531 GNL3LQ9NVN8 582 aaKnown RBP17.06■□□□□ 0.32
TPM3-211ENST00000368531 PSME4Q14997 1843 aa17.05■□□□□ 0.32
TPM3-211ENST00000368531 PSMD14O00487 310 aa17.05■□□□□ 0.32
TPM3-211ENST00000368531 DDNO94850 711 aaPredicted RBP17.05■□□□□ 0.32
TPM3-211ENST00000368531 IL1R1P14778 569 aa17.05■□□□□ 0.32
TPM3-211ENST00000368531 CCDC158Q5M9N0 1113 aa17.05■□□□□ 0.32
TPM3-211ENST00000368531 TTC39AQ5SRH9 613 aa17.05■□□□□ 0.32
TPM3-211ENST00000368531 DPY19L2Q6NUT2 758 aa17.05■□□□□ 0.32
TPM3-211ENST00000368531 ZNF526Q8TF50 670 aaPredicted RBP17.05■□□□□ 0.32
TPM3-211ENST00000368531 MXD3Q9BW11 206 aa17.05■□□□□ 0.32
TPM3-211ENST00000368531 LNPKQ9C0E8 428 aa17.05■□□□□ 0.32
TPM3-211ENST00000368531 USP17L3A6NCW0 530 aa17.04■□□□□ 0.32
TPM3-211ENST00000368531 USP17L4A6NCW7 530 aa17.04■□□□□ 0.32
TPM3-211ENST00000368531 TNIP1Q15025 636 aa17.04■□□□□ 0.32
TPM3-211ENST00000368531 TTLL5Q6EMB2 1281 aa17.04■□□□□ 0.32
TPM3-211ENST00000368531 USP17L1Q7RTZ2 530 aa17.04■□□□□ 0.32
TPM3-211ENST00000368531 ERICH6BQ5W0A0 696 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms