RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 CIAPIN1Q6FI81 312 aa18.77■□□□□ 0.6
SMPDL3A-201ENST00000368440 L3MBTL3Q96JM7 780 aaPredicted RBP18.77■□□□□ 0.6
SMPDL3A-201ENST00000368440 G3V3G9 751 aa18.76■□□□□ 0.59
SMPDL3A-201ENST00000368440 CIAO1O76071 339 aa18.76■□□□□ 0.59
SMPDL3A-201ENST00000368440 PDE8BO95263 885 aa18.76■□□□□ 0.59
SMPDL3A-201ENST00000368440 DCAF8Q5TAQ9 597 aa18.76■□□□□ 0.59
SMPDL3A-201ENST00000368440 CEP85Q6P2H3 762 aa18.76■□□□□ 0.59
SMPDL3A-201ENST00000368440 PSMD14O00487 310 aa18.75■□□□□ 0.59
SMPDL3A-201ENST00000368440 UBE4AQ14139 1066 aa18.75■□□□□ 0.59
SMPDL3A-201ENST00000368440 C15orf52Q6ZUT6 534 aaKnown RBP18.75■□□□□ 0.59
SMPDL3A-201ENST00000368440 SSH3Q8TE77 659 aa18.75■□□□□ 0.59
SMPDL3A-201ENST00000368440 FBXO3Q9UK99 471 aa18.75■□□□□ 0.59
SMPDL3A-201ENST00000368440 ARAP2Q8WZ64 1704 aa18.75■□□□□ 0.59
SMPDL3A-201ENST00000368440 VEGFAP15692 232 aaPredicted RBP18.74■□□□□ 0.59
SMPDL3A-201ENST00000368440 SCNN1DP51172 638 aa18.74■□□□□ 0.59
SMPDL3A-201ENST00000368440 COA1Q9GZY4 146 aa18.74■□□□□ 0.59
SMPDL3A-201ENST00000368440 FGFR2P21802 821 aa18.73■□□□□ 0.59
SMPDL3A-201ENST00000368440 IL15P40933 162 aaPredicted RBP18.73■□□□□ 0.59
SMPDL3A-201ENST00000368440 PODNQ7Z5L7 613 aa18.73■□□□□ 0.59
SMPDL3A-201ENST00000368440 ZBTB12Q9Y330 459 aaPredicted RBP18.73■□□□□ 0.59
SMPDL3A-201ENST00000368440 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.73■□□□□ 0.59
SMPDL3A-201ENST00000368440 GYG1P46976 350 aa18.73■□□□□ 0.59
SMPDL3A-201ENST00000368440 GMPSP49915 693 aaPredicted RBP18.73■□□□□ 0.59
SMPDL3A-201ENST00000368440 TNIP1Q15025 636 aa18.73■□□□□ 0.59
SMPDL3A-201ENST00000368440 CD209Q9NNX6 404 aa18.73■□□□□ 0.59
SMPDL3A-201ENST00000368440 PUM3Q15397 648 aaKnown RBP18.72■□□□□ 0.59
SMPDL3A-201ENST00000368440 FAM84BQ96KN1 310 aaPredicted RBP18.71■□□□□ 0.59
SMPDL3A-201ENST00000368440 CEP126Q9P2H0 1117 aa18.71■□□□□ 0.59
SMPDL3A-201ENST00000368440 ADAMTSL1Q8N6G6 1762 aa18.71■□□□□ 0.59
SMPDL3A-201ENST00000368440 SHTN1A0MZ66 631 aa18.71■□□□□ 0.59
SMPDL3A-201ENST00000368440 EPS15P42566 896 aa18.71■□□□□ 0.59
SMPDL3A-201ENST00000368440 TFCP2Q12800 502 aa18.71■□□□□ 0.59
SMPDL3A-201ENST00000368440 ZNF804AQ7Z570 1209 aa18.71■□□□□ 0.59
SMPDL3A-201ENST00000368440 SIRT2Q8IXJ6 389 aa18.71■□□□□ 0.59
SMPDL3A-201ENST00000368440 MXD3Q9BW11 206 aa18.71■□□□□ 0.59
SMPDL3A-201ENST00000368440 TAF1DQ9H5J8 278 aaPredicted RBP18.71■□□□□ 0.59
SMPDL3A-201ENST00000368440 HACL1Q9UJ83 578 aa18.71■□□□□ 0.59
SMPDL3A-201ENST00000368440 MYH13Q9UKX3 1938 aa18.7■□□□□ 0.58
SMPDL3A-201ENST00000368440 IQCA1LA6NCM1 817 aa18.7■□□□□ 0.58
SMPDL3A-201ENST00000368440 VIL1P09327 827 aaKnown RBP18.7■□□□□ 0.58
SMPDL3A-201ENST00000368440 POTEIP0CG38 1075 aa18.7■□□□□ 0.58
SMPDL3A-201ENST00000368440 POTEJP0CG39 1038 aa18.7■□□□□ 0.58
SMPDL3A-201ENST00000368440 CRBNQ96SW2 442 aa18.7■□□□□ 0.58
SMPDL3A-201ENST00000368440 GPRC5DQ9NZD1 345 aa18.7■□□□□ 0.58
SMPDL3A-201ENST00000368440 USP17L3A6NCW0 530 aa18.69■□□□□ 0.58
SMPDL3A-201ENST00000368440 USP17L4A6NCW7 530 aa18.69■□□□□ 0.58
SMPDL3A-201ENST00000368440 SASH1O94885 1247 aa18.69■□□□□ 0.58
SMPDL3A-201ENST00000368440 IL1R1P14778 569 aa18.69■□□□□ 0.58
SMPDL3A-201ENST00000368440 ATP2B3Q16720 1220 aa18.69■□□□□ 0.58
SMPDL3A-201ENST00000368440 USP17L1Q7RTZ2 530 aa18.69■□□□□ 0.58
SMPDL3A-201ENST00000368440 LPIN2Q92539 896 aa18.69■□□□□ 0.58
SMPDL3A-201ENST00000368440 FBXW7Q969H0 707 aa18.69■□□□□ 0.58
SMPDL3A-201ENST00000368440 CHMP4BQ9H444 224 aaKnown RBP18.69■□□□□ 0.58
SMPDL3A-201ENST00000368440 SUPT16HQ9Y5B9 1047 aaKnown RBP18.69■□□□□ 0.58
SMPDL3A-201ENST00000368440 SURF6O75683 361 aaKnown RBP18.69■□□□□ 0.58
SMPDL3A-201ENST00000368440 HIBADHP31937 336 aaKnown RBP18.69■□□□□ 0.58
SMPDL3A-201ENST00000368440 EPHX2P34913 555 aa18.69■□□□□ 0.58
SMPDL3A-201ENST00000368440 G3BP1Q13283 466 aaKnown RBP eCLIP18.69■□□□□ 0.58
SMPDL3A-201ENST00000368440 IFIT1P09914 478 aaKnown RBP18.68■□□□□ 0.58
SMPDL3A-201ENST00000368440 LMOD1P29536 600 aaPredicted RBP18.68■□□□□ 0.58
SMPDL3A-201ENST00000368440 BCAMP50895 628 aa18.68■□□□□ 0.58
SMPDL3A-201ENST00000368440 GTF2IP78347 998 aa18.68■□□□□ 0.58
SMPDL3A-201ENST00000368440 DACT2Q5SW24 774 aa18.68■□□□□ 0.58
SMPDL3A-201ENST00000368440 RSBN1LQ6PCB5 846 aaPredicted RBP18.68■□□□□ 0.58
SMPDL3A-201ENST00000368440 FBXO33Q7Z6M2 555 aa18.68■□□□□ 0.58
SMPDL3A-201ENST00000368440 RPAP2Q8IXW5 612 aaPredicted RBP18.68■□□□□ 0.58
SMPDL3A-201ENST00000368440 C16orf71Q8IYS4 520 aaPredicted RBP18.68■□□□□ 0.58
SMPDL3A-201ENST00000368440 JAG2Q9Y219 1238 aa18.68■□□□□ 0.58
SMPDL3A-201ENST00000368440 ZNF609O15014 1411 aa18.68■□□□□ 0.58
SMPDL3A-201ENST00000368440 SLC5A1P13866 664 aa18.67■□□□□ 0.58
SMPDL3A-201ENST00000368440 IQSEC3Q9UPP2 1182 aaPredicted RBP18.67■□□□□ 0.58
SMPDL3A-201ENST00000368440 NOP58Q9Y2X3 529 aaKnown RBP18.67■□□□□ 0.58
SMPDL3A-201ENST00000368440 TOMM70O94826 608 aa18.67■□□□□ 0.58
SMPDL3A-201ENST00000368440 ADORA1P30542 326 aa18.67■□□□□ 0.58
SMPDL3A-201ENST00000368440 STRIP1Q5VSL9 837 aa18.67■□□□□ 0.58
SMPDL3A-201ENST00000368440 TTLL5Q6EMB2 1281 aa18.67■□□□□ 0.58
SMPDL3A-201ENST00000368440 MICALL2Q8IY33 904 aa18.67■□□□□ 0.58
SMPDL3A-201ENST00000368440 TDRD7Q8NHU6 1098 aaKnown RBP18.67■□□□□ 0.58
SMPDL3A-201ENST00000368440 GMLQ99445 158 aa18.67■□□□□ 0.58
SMPDL3A-201ENST00000368440 CNOT7Q9UIV1 285 aaKnown RBP18.67■□□□□ 0.58
SMPDL3A-201ENST00000368440 EXOC6BQ9Y2D4 811 aa18.67■□□□□ 0.58
SMPDL3A-201ENST00000368440 TIMM10P62072 90 aa18.66■□□□□ 0.58
SMPDL3A-201ENST00000368440 OS9Q13438 667 aaPredicted RBP18.66■□□□□ 0.58
SMPDL3A-201ENST00000368440 EAPPQ56P03 285 aaPredicted RBP18.66■□□□□ 0.58
SMPDL3A-201ENST00000368440 DPF2Q92785 391 aa18.66■□□□□ 0.58
SMPDL3A-201ENST00000368440 A0A1B0GUL7 405 aa18.65■□□□□ 0.58
SMPDL3A-201ENST00000368440 RPS12P25398 132 aaKnown RBP18.65■□□□□ 0.58
SMPDL3A-201ENST00000368440 CAVIN4Q5BKX8 364 aa18.65■□□□□ 0.58
SMPDL3A-201ENST00000368440 EGFRP00533 1210 aa18.65■□□□□ 0.58
SMPDL3A-201ENST00000368440 VPS37DQ86XT2 251 aa18.65■□□□□ 0.58
SMPDL3A-201ENST00000368440 CERS5Q8N5B7 392 aa18.65■□□□□ 0.58
SMPDL3A-201ENST00000368440 AGBL3Q8NEM8 1001 aa18.65■□□□□ 0.58
SMPDL3A-201ENST00000368440 TRPM4Q8TD43 1214 aa18.65■□□□□ 0.58
SMPDL3A-201ENST00000368440 COL1A1P02452 1464 aaPredicted RBP18.64■□□□□ 0.58
SMPDL3A-201ENST00000368440 RBM46Q8TBY0 533 aaKnown RBP18.64■□□□□ 0.57
SMPDL3A-201ENST00000368440 ADARB2Q9NS39 739 aaKnown RBP18.64■□□□□ 0.57
SMPDL3A-201ENST00000368440 C1QTNF8P60827 252 aa18.63■□□□□ 0.57
SMPDL3A-201ENST00000368440 SAMD7Q7Z3H4 446 aa18.63■□□□□ 0.57
SMPDL3A-201ENST00000368440 AKAP2Q9Y2D5 859 aa18.63■□□□□ 0.57
SMPDL3A-201ENST00000368440 FAM205AQ6ZU69 1335 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms