RNA–Protein interactions for RNA: ENST00000368297.5

LMNA-203, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-203ENST00000368297 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.32■□□□□ 0.68
LMNA-203ENST00000368297 CNKSR1Q969H4 720 aa19.32■□□□□ 0.68
LMNA-203ENST00000368297 EVI5LQ96CN4 794 aa19.32■□□□□ 0.68
LMNA-203ENST00000368297 NSFL1CQ9UNZ2 370 aaKnown RBP19.32■□□□□ 0.68
LMNA-203ENST00000368297 ATP6V0A2Q9Y487 856 aa19.32■□□□□ 0.68
LMNA-203ENST00000368297 WTIPA6NIX2 430 aaPredicted RBP19.31■□□□□ 0.68
LMNA-203ENST00000368297 LEMD3Q9Y2U8 911 aa19.31■□□□□ 0.68
LMNA-203ENST00000368297 NDUFB9Q9Y6M9 179 aa19.31■□□□□ 0.68
LMNA-203ENST00000368297 KIF13BQ9NQT8 1826 aa19.3■□□□□ 0.68
LMNA-203ENST00000368297 CAVIN4Q5BKX8 364 aa19.3■□□□□ 0.68
LMNA-203ENST00000368297 SNRKQ9NRH2 765 aa19.3■□□□□ 0.68
LMNA-203ENST00000368297 ATP2B4P23634 1241 aa19.3■□□□□ 0.68
LMNA-203ENST00000368297 BCAMP50895 628 aa19.3■□□□□ 0.68
LMNA-203ENST00000368297 VPS37DQ86XT2 251 aa19.3■□□□□ 0.68
LMNA-203ENST00000368297 EDC3Q96F86 508 aaKnown RBP19.3■□□□□ 0.68
LMNA-203ENST00000368297 ZNF512BQ96KM6 892 aaPredicted RBP19.3■□□□□ 0.68
LMNA-203ENST00000368297 FSD1Q9BTV5 496 aa19.3■□□□□ 0.68
LMNA-203ENST00000368297 PAG1Q9NWQ8 432 aa19.3■□□□□ 0.68
LMNA-203ENST00000368297 GGA1Q9UJY5 639 aa19.3■□□□□ 0.68
LMNA-203ENST00000368297 DLEC1Q9Y238 1755 aa19.3■□□□□ 0.68
LMNA-203ENST00000368297 GOLIM4O00461 696 aa19.29■□□□□ 0.68
LMNA-203ENST00000368297 EIF5BO60841 1220 aaKnown RBP19.29■□□□□ 0.68
LMNA-203ENST00000368297 UFL1O94874 794 aa19.29■□□□□ 0.68
LMNA-203ENST00000368297 GYG1P46976 350 aa19.29■□□□□ 0.68
LMNA-203ENST00000368297 FKBP4Q02790 459 aaKnown RBP eCLIP19.29■□□□□ 0.68
LMNA-203ENST00000368297 PRPF40BQ6NWY9 871 aaKnown RBP19.29■□□□□ 0.68
LMNA-203ENST00000368297 KLHL34Q8N239 644 aa19.29■□□□□ 0.68
LMNA-203ENST00000368297 GNL3LQ9NVN8 582 aaKnown RBP19.29■□□□□ 0.68
LMNA-203ENST00000368297 PPP1R1BQ9UD71 204 aaPredicted RBP19.29■□□□□ 0.68
LMNA-203ENST00000368297 DPEP1P16444 411 aa19.28■□□□□ 0.68
LMNA-203ENST00000368297 ARID4AP29374 1257 aaPredicted RBP19.28■□□□□ 0.68
LMNA-203ENST00000368297 SCARF1Q14162 830 aa19.28■□□□□ 0.68
LMNA-203ENST00000368297 ZNF219Q9P2Y4 722 aaPredicted RBP19.28■□□□□ 0.68
LMNA-203ENST00000368297 A0A0G2JLW4 131 aa19.27■□□□□ 0.68
LMNA-203ENST00000368297 CHMLP26374 656 aa19.27■□□□□ 0.68
LMNA-203ENST00000368297 KLRK1P26718 216 aa19.27■□□□□ 0.68
LMNA-203ENST00000368297 MCAMP43121 646 aa19.27■□□□□ 0.68
LMNA-203ENST00000368297 ERICH6Q7L0X2 663 aa19.27■□□□□ 0.68
LMNA-203ENST00000368297 PODXL2Q9NZ53 605 aa19.27■□□□□ 0.68
LMNA-203ENST00000368297 SLX4Q8IY92 1834 aa19.27■□□□□ 0.68
LMNA-203ENST00000368297 C6orf229H3BNL8 230 aa19.27■□□□□ 0.67
LMNA-203ENST00000368297 SEC24BO95487 1268 aa19.27■□□□□ 0.67
LMNA-203ENST00000368297 ZAP70P43403 619 aa19.27■□□□□ 0.67
LMNA-203ENST00000368297 MPNDQ8N594 471 aa19.27■□□□□ 0.67
LMNA-203ENST00000368297 SGIP1Q9BQI5 828 aa19.27■□□□□ 0.67
LMNA-203ENST00000368297 DIAPH3Q9NSV4 1193 aa19.27■□□□□ 0.67
LMNA-203ENST00000368297 HIBADHP31937 336 aaKnown RBP19.26■□□□□ 0.67
LMNA-203ENST00000368297 MFAP1P55081 439 aaKnown RBP19.26■□□□□ 0.67
LMNA-203ENST00000368297 TGFB2P61812 414 aa19.26■□□□□ 0.67
LMNA-203ENST00000368297 OLFM4Q6UX06 510 aa19.26■□□□□ 0.67
LMNA-203ENST00000368297 PI16Q6UXB8 463 aa19.26■□□□□ 0.67
LMNA-203ENST00000368297 FAM84BQ96KN1 310 aaPredicted RBP19.26■□□□□ 0.67
LMNA-203ENST00000368297 GPR101Q96P66 508 aaPredicted RBP19.26■□□□□ 0.67
LMNA-203ENST00000368297 PTGER2P43116 358 aa19.25■□□□□ 0.67
LMNA-203ENST00000368297 DPP8Q6V1X1 898 aaPredicted RBP19.25■□□□□ 0.67
LMNA-203ENST00000368297 TTLL6Q8N841 843 aa19.25■□□□□ 0.67
LMNA-203ENST00000368297 SPATA5Q8NB90 893 aa19.25■□□□□ 0.67
LMNA-203ENST00000368297 TBC1D16Q8TBP0 767 aa19.25■□□□□ 0.67
LMNA-203ENST00000368297 SPON1Q9HCB6 807 aa19.25■□□□□ 0.67
LMNA-203ENST00000368297 HMG20BQ9P0W2 317 aa19.25■□□□□ 0.67
LMNA-203ENST00000368297 IQSEC3Q9UPP2 1182 aaPredicted RBP19.25■□□□□ 0.67
LMNA-203ENST00000368297 AKAP11Q9UKA4 1901 aa19.25■□□□□ 0.67
LMNA-203ENST00000368297 HIP1O00291 1037 aa19.24■□□□□ 0.67
LMNA-203ENST00000368297 FRAT2O75474 233 aaPredicted RBP19.24■□□□□ 0.67
LMNA-203ENST00000368297 RASGRF1Q13972 1273 aa19.24■□□□□ 0.67
LMNA-203ENST00000368297 FBXO33Q7Z6M2 555 aa19.24■□□□□ 0.67
LMNA-203ENST00000368297 KBTBD3Q8NAB2 608 aa19.24■□□□□ 0.67
LMNA-203ENST00000368297 ANTXR1Q9H6X2 564 aa19.24■□□□□ 0.67
LMNA-203ENST00000368297 POLLQ9UGP5 575 aa19.24■□□□□ 0.67
LMNA-203ENST00000368297 LTBP1Q14766 1721 aa19.24■□□□□ 0.67
LMNA-203ENST00000368297 ZNF804AQ7Z570 1209 aa19.24■□□□□ 0.67
LMNA-203ENST00000368297 TXNRD3Q86VQ6 643 aa19.24■□□□□ 0.67
LMNA-203ENST00000368297 KIAA1551Q9HCM1 1747 aa19.23■□□□□ 0.67
LMNA-203ENST00000368297 TTF1Q15361 905 aaPredicted RBP19.23■□□□□ 0.67
LMNA-203ENST00000368297 C15orf52Q6ZUT6 534 aaKnown RBP19.23■□□□□ 0.67
LMNA-203ENST00000368297 ESYT1Q9BSJ8 1104 aa19.23■□□□□ 0.67
LMNA-203ENST00000368297 CD2APQ9Y5K6 639 aa19.23■□□□□ 0.67
LMNA-203ENST00000368297 IRS2Q9Y4H2 1338 aa19.23■□□□□ 0.67
LMNA-203ENST00000368297 MYH13Q9UKX3 1938 aa19.22■□□□□ 0.67
LMNA-203ENST00000368297 KCNA3P22001 575 aa19.22■□□□□ 0.67
LMNA-203ENST00000368297 RUFY2Q8WXA3 655 aa19.22■□□□□ 0.67
LMNA-203ENST00000368297 DAXXQ9UER7 740 aaPredicted RBP19.22■□□□□ 0.67
LMNA-203ENST00000368297 RFX7Q2KHR2 1363 aa19.22■□□□□ 0.67
LMNA-203ENST00000368297 MED23Q9ULK4 1368 aa19.21■□□□□ 0.67
LMNA-203ENST00000368297 CYP2E1P05181 493 aaPredicted RBP19.21■□□□□ 0.67
LMNA-203ENST00000368297 CC2D2BQ6DHV5 1058 aa19.21■□□□□ 0.67
LMNA-203ENST00000368297 CWC27Q6UX04 472 aaKnown RBP19.21■□□□□ 0.67
LMNA-203ENST00000368297 PIM2Q9P1W9 311 aa19.21■□□□□ 0.67
LMNA-203ENST00000368297 DENND2AQ9ULE3 1009 aa19.21■□□□□ 0.67
LMNA-203ENST00000368297 DUOX1Q9NRD9 1551 aa19.21■□□□□ 0.67
LMNA-203ENST00000368297 RIMBP2O15034 1052 aa19.2■□□□□ 0.66
LMNA-203ENST00000368297 SEMA3EO15041 775 aa19.2■□□□□ 0.66
LMNA-203ENST00000368297 C21orf2O43822 256 aa19.2■□□□□ 0.66
LMNA-203ENST00000368297 NMIQ13287 307 aaPredicted RBP19.2■□□□□ 0.66
LMNA-203ENST00000368297 LRRFIP1Q32MZ4 808 aaKnown RBP19.2■□□□□ 0.66
LMNA-203ENST00000368297 EYA3Q99504 573 aa19.2■□□□□ 0.66
LMNA-203ENST00000368297 C7orf43Q8WVR3 580 aa19.2■□□□□ 0.66
LMNA-203ENST00000368297 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.2■□□□□ 0.662e-7■■■□□ 17.1
LMNA-203ENST00000368297 PIH1D3Q9NQM4 214 aaKnown RBP19.2■□□□□ 0.66
LMNA-203ENST00000368297 REC8O95072 547 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms