RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 ANKRD18BA2A2Z9 1011 aa18.46■□□□□ 0.55
SF3B5-201ENST00000367569 TRIM27P14373 513 aa18.46■□□□□ 0.55
SF3B5-201ENST00000367569 MAP2K1Q02750 393 aaPredicted RBP18.46■□□□□ 0.55
SF3B5-201ENST00000367569 SAMD7Q7Z3H4 446 aa18.46■□□□□ 0.55
SF3B5-201ENST00000367569 ANKRD44Q8N8A2 993 aa18.46■□□□□ 0.55
SF3B5-201ENST00000367569 USP44Q9H0E7 712 aa18.46■□□□□ 0.55
SF3B5-201ENST00000367569 PODXL2Q9NZ53 605 aa18.46■□□□□ 0.55
SF3B5-201ENST00000367569 ECE1P42892 770 aa18.45■□□□□ 0.54
SF3B5-201ENST00000367569 IFIT5Q13325 482 aaKnown RBP18.45■□□□□ 0.54
SF3B5-201ENST00000367569 CDC37L1Q7L3B6 337 aa18.45■□□□□ 0.54
SF3B5-201ENST00000367569 SAPCD2Q86UD0 394 aa18.45■□□□□ 0.54
SF3B5-201ENST00000367569 ZC3H12CQ9C0D7 883 aaKnown RBP18.45■□□□□ 0.54
SF3B5-201ENST00000367569 GGA1Q9UJY5 639 aa18.45■□□□□ 0.54
SF3B5-201ENST00000367569 UTYO14607 1347 aa18.45■□□□□ 0.54
SF3B5-201ENST00000367569 XDHP47989 1333 aa18.45■□□□□ 0.54
SF3B5-201ENST00000367569 THSD7BQ9C0I4 1608 aa18.45■□□□□ 0.54
SF3B5-201ENST00000367569 SNAP23O00161 211 aa18.44■□□□□ 0.54
SF3B5-201ENST00000367569 EGFRP00533 1210 aa18.44■□□□□ 0.54
SF3B5-201ENST00000367569 HSPA8P11142 646 aaKnown RBP18.44■□□□□ 0.54
SF3B5-201ENST00000367569 KLRK1P26718 216 aa18.44■□□□□ 0.54
SF3B5-201ENST00000367569 CCT4P50991 539 aaKnown RBP18.44■□□□□ 0.54
SF3B5-201ENST00000367569 BRPF1P55201 1214 aaPredicted RBP18.44■□□□□ 0.54
SF3B5-201ENST00000367569 TBC1D10BQ4KMP7 808 aaPredicted RBP18.44■□□□□ 0.54
SF3B5-201ENST00000367569 TAF7LQ5H9L4 462 aa18.44■□□□□ 0.54
SF3B5-201ENST00000367569 DLK2Q6UY11 383 aa18.44■□□□□ 0.54
SF3B5-201ENST00000367569 USP48Q86UV5 1035 aa18.44■□□□□ 0.54
SF3B5-201ENST00000367569 HELBQ8NG08 1087 aaPredicted RBP18.44■□□□□ 0.54
SF3B5-201ENST00000367569 MPHOSPH8Q99549 860 aa18.44■□□□□ 0.54
SF3B5-201ENST00000367569 MEIS3Q99687 375 aa18.44■□□□□ 0.54
SF3B5-201ENST00000367569 MINPP1Q9UNW1 487 aa18.44■□□□□ 0.54
SF3B5-201ENST00000367569 POLR2AP24928 1970 aaKnown RBP18.44■□□□□ 0.54
SF3B5-201ENST00000367569 AOC2O75106 756 aa18.43■□□□□ 0.54
SF3B5-201ENST00000367569 KLHDC4Q8TBB5 520 aa18.43■□□□□ 0.54
SF3B5-201ENST00000367569 ZNF408Q9H9D4 720 aa18.43■□□□□ 0.54
SF3B5-201ENST00000367569 BSDC1Q9NW68 430 aaPredicted RBP18.43■□□□□ 0.54
SF3B5-201ENST00000367569 TAF5LO75529 589 aa18.42■□□□□ 0.54
SF3B5-201ENST00000367569 RPS12P25398 132 aaKnown RBP18.42■□□□□ 0.54
SF3B5-201ENST00000367569 CHRNDQ07001 517 aa18.42■□□□□ 0.54
SF3B5-201ENST00000367569 CCDC57Q2TAC2 916 aa18.42■□□□□ 0.54
SF3B5-201ENST00000367569 RBM26Q5T8P6 1007 aaKnown RBP18.42■□□□□ 0.54
SF3B5-201ENST00000367569 ATF7IPQ6VMQ6 1270 aa18.42■□□□□ 0.54
SF3B5-201ENST00000367569 PUS3Q9BZE2 481 aaKnown RBP18.42■□□□□ 0.54
SF3B5-201ENST00000367569 PLIN1O60240 522 aa18.41■□□□□ 0.54
SF3B5-201ENST00000367569 VIL1P09327 827 aaKnown RBP18.41■□□□□ 0.54
SF3B5-201ENST00000367569 UBTFL1P0CB47 393 aaPredicted RBP18.41■□□□□ 0.54
SF3B5-201ENST00000367569 ZKSCAN2Q63HK3 967 aa18.41■□□□□ 0.54
SF3B5-201ENST00000367569 LRRFIP2Q9Y608 721 aaKnown RBP18.41■□□□□ 0.54
SF3B5-201ENST00000367569 G3V3G9 751 aa18.4■□□□□ 0.54
SF3B5-201ENST00000367569 DCAF8Q5TAQ9 597 aa18.4■□□□□ 0.54
SF3B5-201ENST00000367569 TMEM57Q8N5G2 664 aa18.4■□□□□ 0.54
SF3B5-201ENST00000367569 CNNM1Q9NRU3 951 aa18.4■□□□□ 0.54
SF3B5-201ENST00000367569 IPO8O15397 1037 aaKnown RBP18.39■□□□□ 0.53
SF3B5-201ENST00000367569 MAP2K2P36507 400 aa18.39■□□□□ 0.53
SF3B5-201ENST00000367569 RABL6Q3YEC7 729 aaPredicted RBP18.39■□□□□ 0.53
SF3B5-201ENST00000367569 TXNRD3Q86VQ6 643 aa18.39■□□□□ 0.53
SF3B5-201ENST00000367569 ARHGAP45Q92619 1136 aa18.39■□□□□ 0.53
SF3B5-201ENST00000367569 HHIPL1Q96JK4 782 aa18.39■□□□□ 0.53
SF3B5-201ENST00000367569 RLBP1P12271 317 aa18.38■□□□□ 0.53
SF3B5-201ENST00000367569 ATP2B4P23634 1241 aa18.38■□□□□ 0.53
SF3B5-201ENST00000367569 KCNJ4P48050 445 aa18.38■□□□□ 0.53
SF3B5-201ENST00000367569 INTS3Q68E01 1043 aaKnown RBP18.38■□□□□ 0.53
SF3B5-201ENST00000367569 LDHAL6AQ6ZMR3 332 aa18.38■□□□□ 0.53
SF3B5-201ENST00000367569 KRT26Q7Z3Y9 468 aa18.38■□□□□ 0.53
SF3B5-201ENST00000367569 MED23Q9ULK4 1368 aa18.38■□□□□ 0.53
SF3B5-201ENST00000367569 ADM5C9JUS6 153 aa18.37■□□□□ 0.53
SF3B5-201ENST00000367569 KIF4BQ2VIQ3 1234 aa18.37■□□□□ 0.53
SF3B5-201ENST00000367569 LRRC24Q50LG9 513 aa18.37■□□□□ 0.53
SF3B5-201ENST00000367569 RSBN1LQ6PCB5 846 aaPredicted RBP18.37■□□□□ 0.53
SF3B5-201ENST00000367569 FTSJ3Q8IY81 847 aaKnown RBP18.37■□□□□ 0.53
SF3B5-201ENST00000367569 FBXW7Q969H0 707 aa18.37■□□□□ 0.53
SF3B5-201ENST00000367569 DCPSQ96C86 337 aaKnown RBP18.37■□□□□ 0.53
SF3B5-201ENST00000367569 BEGAINQ9BUH8 593 aa18.37■□□□□ 0.53
SF3B5-201ENST00000367569 TSKSQ9UJT2 592 aa18.37■□□□□ 0.53
SF3B5-201ENST00000367569 ZNF804BA4D1E1 1349 aa18.37■□□□□ 0.53
SF3B5-201ENST00000367569 ASTN2O75129 1339 aaPredicted RBP18.37■□□□□ 0.53
SF3B5-201ENST00000367569 ITPRIPQ8IWB1 547 aa18.36■□□□□ 0.53
SF3B5-201ENST00000367569 PANK1Q8TE04 598 aa18.36■□□□□ 0.53
SF3B5-201ENST00000367569 C1orf115Q9H7X2 142 aa18.36■□□□□ 0.53
SF3B5-201ENST00000367569 MYH13Q9UKX3 1938 aa18.35■□□□□ 0.53
SF3B5-201ENST00000367569 HUNKP57058 714 aa18.35■□□□□ 0.53
SF3B5-201ENST00000367569 ZNF280AP59817 542 aaPredicted RBP18.35■□□□□ 0.53
SF3B5-201ENST00000367569 AGBL3Q8NEM8 1001 aa18.35■□□□□ 0.53
SF3B5-201ENST00000367569 ZIC5Q96T25 663 aa18.35■□□□□ 0.53
SF3B5-201ENST00000367569 ANKRD2Q9GZV1 360 aa18.35■□□□□ 0.53
SF3B5-201ENST00000367569 SIL1Q9H173 461 aa18.35■□□□□ 0.53
SF3B5-201ENST00000367569 GGA3Q9NZ52 723 aa18.35■□□□□ 0.53
SF3B5-201ENST00000367569 ZNF609O15014 1411 aa18.34■□□□□ 0.53
SF3B5-201ENST00000367569 PODNQ7Z5L7 613 aa18.34■□□□□ 0.53
SF3B5-201ENST00000367569 GMLQ99445 158 aa18.34■□□□□ 0.53
SF3B5-201ENST00000367569 MXD3Q9BW11 206 aa18.34■□□□□ 0.53
SF3B5-201ENST00000367569 GBA2Q9HCG7 927 aaPredicted RBP18.34■□□□□ 0.53
SF3B5-201ENST00000367569 RCAN3Q9UKA8 241 aa18.34■□□□□ 0.53
SF3B5-201ENST00000367569 PA2G4Q9UQ80 394 aaKnown RBP18.34■□□□□ 0.53
SF3B5-201ENST00000367569 ARAP2Q8WZ64 1704 aa18.33■□□□□ 0.52
SF3B5-201ENST00000367569 RFX5P48382 616 aaPredicted RBP18.33■□□□□ 0.52
SF3B5-201ENST00000367569 SCARF1Q14162 830 aa18.33■□□□□ 0.52
SF3B5-201ENST00000367569 DZIP1LQ8IYY4 767 aaKnown RBP18.33■□□□□ 0.52
SF3B5-201ENST00000367569 JAG2Q9Y219 1238 aa18.33■□□□□ 0.52
SF3B5-201ENST00000367569 LEMD3Q9Y2U8 911 aa18.33■□□□□ 0.52
SF3B5-201ENST00000367569 IRS2Q9Y4H2 1338 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms