RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.27□□□□□ -1.73
SYNE1-207ENST00000367255 H3BQV1 296 aa4.27□□□□□ -1.73
SYNE1-207ENST00000367255 KIF5BP33176 963 aa4.27□□□□□ -1.73
SYNE1-207ENST00000367255 FKBP15Q5T1M5 1219 aa4.27□□□□□ -1.73
SYNE1-207ENST00000367255 IFFO2Q5TF58 517 aa4.27□□□□□ -1.73
SYNE1-207ENST00000367255 TSG101Q99816 390 aa4.27□□□□□ -1.73
SYNE1-207ENST00000367255 IRAK4Q9NWZ3 460 aa4.27□□□□□ -1.73
SYNE1-207ENST00000367255 PCP11498 1178 aaKnown RBP4.26□□□□□ -1.73
SYNE1-207ENST00000367255 NEUROD6Q96NK8 337 aa4.26□□□□□ -1.73
SYNE1-207ENST00000367255 SDF4Q9BRK5 362 aa4.26□□□□□ -1.73
SYNE1-207ENST00000367255 SSX2IPQ9Y2D8 614 aa4.26□□□□□ -1.73
SYNE1-207ENST00000367255 PEG3Q9GZU2 1588 aa4.26□□□□□ -1.73
SYNE1-207ENST00000367255 IKQ13123 557 aaPredicted RBP4.26□□□□□ -1.73
SYNE1-207ENST00000367255 HDXQ7Z353 690 aa4.26□□□□□ -1.73
SYNE1-207ENST00000367255 LRRC9Q6ZRR7 1453 aa4.26□□□□□ -1.73
SYNE1-207ENST00000367255 KAT6BQ8WYB5 2073 aa4.26□□□□□ -1.73
SYNE1-207ENST00000367255 CNTROBQ8N137 903 aa4.26□□□□□ -1.73
SYNE1-207ENST00000367255 FNBP4Q8N3X1 1017 aaPredicted RBP4.26□□□□□ -1.73
SYNE1-207ENST00000367255 MPHOSPH9Q99550 1183 aa4.26□□□□□ -1.73
SYNE1-207ENST00000367255 NDE1Q9NXR1 346 aa4.26□□□□□ -1.73
SYNE1-207ENST00000367255 OLFML2BQ68BL8 750 aa4.26□□□□□ -1.73
SYNE1-207ENST00000367255 MCF2L2Q86YR7 1114 aa4.26□□□□□ -1.73
SYNE1-207ENST00000367255 BMP2KQ9NSY1 1161 aaPredicted RBP4.26□□□□□ -1.73
SYNE1-207ENST00000367255 MCM9Q9NXL9 1143 aa4.26□□□□□ -1.73
SYNE1-207ENST00000367255 JRKLQ9Y4A0 524 aa4.26□□□□□ -1.73
SYNE1-207ENST00000367255 CPLX1O14810 134 aa4.26□□□□□ -1.73
SYNE1-207ENST00000367255 EPS15P42566 896 aa4.26□□□□□ -1.73
SYNE1-207ENST00000367255 EIF3CQ99613 913 aaKnown RBP4.26□□□□□ -1.73
SYNE1-207ENST00000367255 TRIM5Q9C035 493 aa4.26□□□□□ -1.73
SYNE1-207ENST00000367255 FAM135AQ9P2D6 1515 aa4.26□□□□□ -1.73
SYNE1-207ENST00000367255 TRPC3Q13507 836 aa4.26□□□□□ -1.73
SYNE1-207ENST00000367255 PSD3Q9NYI0 1048 aa4.26□□□□□ -1.73
SYNE1-207ENST00000367255 STK38LQ9Y2H1 464 aa4.26□□□□□ -1.73
SYNE1-207ENST00000367255 ANKRD50Q9ULJ7 1429 aa4.26□□□□□ -1.73
SYNE1-207ENST00000367255 TNKSO95271 1327 aa4.26□□□□□ -1.73
SYNE1-207ENST00000367255 PHLPP2Q6ZVD8 1323 aa4.26□□□□□ -1.73
SYNE1-207ENST00000367255 XPO1O14980 1071 aaKnown RBP4.26□□□□□ -1.73
SYNE1-207ENST00000367255 NEDD9Q14511 834 aa4.26□□□□□ -1.73
SYNE1-207ENST00000367255 LACTBP83111 547 aaPredicted RBP4.26□□□□□ -1.73
SYNE1-207ENST00000367255 LNPKQ9C0E8 428 aa4.26□□□□□ -1.73
SYNE1-207ENST00000367255 TRIM22Q8IYM9 498 aa4.26□□□□□ -1.73
SYNE1-207ENST00000367255 CWC27Q6UX04 472 aaKnown RBP4.26□□□□□ -1.73
SYNE1-207ENST00000367255 GRIPAP1Q4V328 841 aa4.26□□□□□ -1.73
SYNE1-207ENST00000367255 PRPF40BQ6NWY9 871 aaKnown RBP4.26□□□□□ -1.73
SYNE1-207ENST00000367255 FRA10AC1Q70Z53 315 aa4.26□□□□□ -1.73
SYNE1-207ENST00000367255 KIAA0232Q92628 1395 aa4.26□□□□□ -1.73
SYNE1-207ENST00000367255 CCDC25Q86WR0 208 aa4.26□□□□□ -1.73
SYNE1-207ENST00000367255 DSEQ9UL01 958 aa4.26□□□□□ -1.73
SYNE1-207ENST00000367255 CCDC151A5D8V7 595 aa4.26□□□□□ -1.73
SYNE1-207ENST00000367255 AMPD3Q01432 767 aa4.26□□□□□ -1.73
SYNE1-207ENST00000367255 DHX9Q08211 1270 aaKnown RBP4.26□□□□□ -1.73
SYNE1-207ENST00000367255 NCAPGQ9BPX3 1015 aa4.26□□□□□ -1.73
SYNE1-207ENST00000367255 GOLGA8MH3BSY2 632 aa4.26□□□□□ -1.73
SYNE1-207ENST00000367255 UIMC1Q96RL1 719 aa4.26□□□□□ -1.73
SYNE1-207ENST00000367255 GOLGA8JA6NMD2 632 aa4.26□□□□□ -1.73
SYNE1-207ENST00000367255 MSANTD4Q8NCY6 345 aa4.26□□□□□ -1.73
SYNE1-207ENST00000367255 NACAP1Q9BZK3 213 aa4.26□□□□□ -1.73
SYNE1-207ENST00000367255 URI1O94763 535 aaPredicted RBP4.26□□□□□ -1.73
SYNE1-207ENST00000367255 TAOK1Q7L7X3 1001 aa4.26□□□□□ -1.73
SYNE1-207ENST00000367255 MYRIPQ8NFW9 859 aa4.26□□□□□ -1.73
SYNE1-207ENST00000367255 ADAMTS8Q9UP79 889 aa4.26□□□□□ -1.73
SYNE1-207ENST00000367255 EIF3BP55884 814 aaKnown RBP4.26□□□□□ -1.73
SYNE1-207ENST00000367255 PTPN14Q15678 1187 aa4.26□□□□□ -1.73
SYNE1-207ENST00000367255 SYNCQ9H7C4 482 aa4.26□□□□□ -1.73
SYNE1-207ENST00000367255 HOMER3Q9NSC5 361 aa4.26□□□□□ -1.73
SYNE1-207ENST00000367255 A0A1B0GVL5 298 aa4.26□□□□□ -1.73
SYNE1-207ENST00000367255 TRAPPC8Q9Y2L5 1435 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 BICDL1Q6ZP65 573 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 ZNF365Q70YC5 407 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 KIAA0825Q8IV33 1275 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 SIKE1Q9BRV8 207 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 SYCP3Q8IZU3 236 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 PSDA5PKW4 1024 aaPredicted RBP4.25□□□□□ -1.73
SYNE1-207ENST00000367255 YEATS4O95619 227 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 NAP1L1P55209 391 aaKnown RBP4.25□□□□□ -1.73
SYNE1-207ENST00000367255 KRT27Q7Z3Y8 459 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 EPC1Q9H2F5 836 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 ST5P78524 1137 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 GAS2L2Q8NHY3 880 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 CTNNAL1Q9UBT7 734 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 TRIM35Q9UPQ4 493 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 SEPT7Q16181 437 aaKnown RBP4.25□□□□□ -1.73
SYNE1-207ENST00000367255 FSD2A1L4K1 749 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 CLTAP09496 248 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 STXBP4Q6ZWJ1 553 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 NEK1Q96PY6 1258 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 TTC41PQ6P2S7 1318 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 RUSC2Q8N2Y8 1516 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 MRFAP1L1Q96HT8 127 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 SNUPNO95149 360 aaKnown RBP4.25□□□□□ -1.73
SYNE1-207ENST00000367255 SNX16P57768 344 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 NBPF6Q5VWK0 638 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 NBPF5PQ86XG9 351 aaPredicted RBP4.25□□□□□ -1.73
SYNE1-207ENST00000367255 DTX3LQ8TDB6 740 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 NBPF4Q96M43 638 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.25□□□□□ -1.73
SYNE1-207ENST00000367255 ZNF853P0CG23 659 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 ZNF692Q9BU19 519 aaPredicted RBP4.25□□□□□ -1.73
SYNE1-207ENST00000367255 GAS8O95995 478 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 GPIHBP1Q8IV16 184 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms