RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 TRIM11Q96F44 468 aa11.76□□□□□ -0.53
H3F3A-201ENST00000366813 INO80Q9ULG1 1556 aaPredicted RBP11.75□□□□□ -0.53
H3F3A-201ENST00000366813 SRPK2P78362 688 aaKnown RBP11.75□□□□□ -0.53
H3F3A-201ENST00000366813 CD163Q86VB7 1156 aa11.75□□□□□ -0.53
H3F3A-201ENST00000366813 SCAF11Q99590 1463 aaKnown RBP11.74□□□□□ -0.53
H3F3A-201ENST00000366813 FMN1Q68DA7 1419 aa11.74□□□□□ -0.53
H3F3A-201ENST00000366813 FAM196BA6NMK8 535 aa11.74□□□□□ -0.53
H3F3A-201ENST00000366813 USP17L15C9J2P7 530 aa11.74□□□□□ -0.53
H3F3A-201ENST00000366813 USP17L10C9JJH3 530 aa11.74□□□□□ -0.53
H3F3A-201ENST00000366813 USP17L13C9JLJ4 530 aa11.74□□□□□ -0.53
H3F3A-201ENST00000366813 USP17L12C9JPN9 530 aa11.74□□□□□ -0.53
H3F3A-201ENST00000366813 USP17L11C9JVI0 530 aa11.74□□□□□ -0.53
H3F3A-201ENST00000366813 USP17L21D6R901 530 aa11.74□□□□□ -0.53
H3F3A-201ENST00000366813 USP17L18D6R9N7 530 aa11.74□□□□□ -0.53
H3F3A-201ENST00000366813 USP17L22D6RA61 530 aa11.74□□□□□ -0.53
H3F3A-201ENST00000366813 USP17L17D6RBQ6 530 aa11.74□□□□□ -0.53
H3F3A-201ENST00000366813 USP17L19D6RCP7 530 aa11.74□□□□□ -0.53
H3F3A-201ENST00000366813 USP17L20D6RJB6 530 aa11.74□□□□□ -0.53
H3F3A-201ENST00000366813 M0R082 166 aa11.74□□□□□ -0.53
H3F3A-201ENST00000366813 ADH7P40394 386 aa11.74□□□□□ -0.53
H3F3A-201ENST00000366813 TBC1D8BQ0IIM8 1120 aa11.74□□□□□ -0.53
H3F3A-201ENST00000366813 USP17L24Q0WX57 530 aa11.74□□□□□ -0.53
H3F3A-201ENST00000366813 ZNF417Q8TAU3 575 aa11.74□□□□□ -0.53
H3F3A-201ENST00000366813 ZNF587Q96SQ5 575 aaPredicted RBP11.74□□□□□ -0.53
H3F3A-201ENST00000366813 IGFLR1Q9H665 355 aa11.74□□□□□ -0.53
H3F3A-201ENST00000366813 MAP3K1Q13233 1512 aa11.74□□□□□ -0.53
H3F3A-201ENST00000366813 LRRC9Q6ZRR7 1453 aa11.74□□□□□ -0.53
H3F3A-201ENST00000366813 COL16A1Q07092 1604 aaPredicted RBP11.73□□□□□ -0.53
H3F3A-201ENST00000366813 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.73□□□□□ -0.53
H3F3A-201ENST00000366813 K7ELQ4 463 aaPredicted RBP11.73□□□□□ -0.53
H3F3A-201ENST00000366813 PPP1R15AO75807 674 aaPredicted RBP11.73□□□□□ -0.53
H3F3A-201ENST00000366813 RBM6P78332 1123 aaKnown RBP11.73□□□□□ -0.53
H3F3A-201ENST00000366813 PRRT3Q5FWE3 981 aa11.73□□□□□ -0.53
H3F3A-201ENST00000366813 HOMEZQ8IX15 550 aa11.73□□□□□ -0.53
H3F3A-201ENST00000366813 PBXIP1Q96AQ6 731 aa11.73□□□□□ -0.53
H3F3A-201ENST00000366813 QTRT2Q9H974 415 aaKnown RBP11.73□□□□□ -0.53
H3F3A-201ENST00000366813 CDC42BPAQ5VT25 1732 aa11.73□□□□□ -0.53
H3F3A-201ENST00000366813 FURINP09958 794 aa11.72□□□□□ -0.53
H3F3A-201ENST00000366813 SPATA31C1P0DKV0 1188 aa11.72□□□□□ -0.53
H3F3A-201ENST00000366813 KCNA6P17658 529 aa11.72□□□□□ -0.53
H3F3A-201ENST00000366813 IGFBP4P22692 258 aa11.72□□□□□ -0.53
H3F3A-201ENST00000366813 RTN1Q16799 776 aa11.72□□□□□ -0.53
H3F3A-201ENST00000366813 MDFIQ99750 246 aa11.72□□□□□ -0.53
H3F3A-201ENST00000366813 FGD6Q6ZV73 1430 aa11.72□□□□□ -0.53
H3F3A-201ENST00000366813 DHX29Q7Z478 1369 aaKnown RBP11.72□□□□□ -0.53
H3F3A-201ENST00000366813 CHRNA4P43681 627 aa11.71□□□□□ -0.53
H3F3A-201ENST00000366813 VTI1AQ96AJ9 217 aa11.71□□□□□ -0.53
H3F3A-201ENST00000366813 PNMA5Q96PV4 448 aa11.71□□□□□ -0.53
H3F3A-201ENST00000366813 UBE2OQ9C0C9 1292 aaKnown RBP11.71□□□□□ -0.53
H3F3A-201ENST00000366813 MICALL1Q8N3F8 863 aa11.7□□□□□ -0.54
H3F3A-201ENST00000366813 KIAA1107Q9UPP5 1409 aa11.7□□□□□ -0.54
H3F3A-201ENST00000366813 MSH6P52701 1360 aa11.7□□□□□ -0.54
H3F3A-201ENST00000366813 GPATCH8Q9UKJ3 1502 aaKnown RBP11.7□□□□□ -0.54
H3F3A-201ENST00000366813 ADGBQ8N7X0 1667 aa11.7□□□□□ -0.54
H3F3A-201ENST00000366813 LRRIQ1Q96JM4 1722 aa11.69□□□□□ -0.54
H3F3A-201ENST00000366813 SLC26A8Q96RN1 970 aa11.69□□□□□ -0.54
H3F3A-201ENST00000366813 CFDP1Q9UEE9 299 aaPredicted RBP11.69□□□□□ -0.54
H3F3A-201ENST00000366813 STARD13Q9Y3M8 1113 aa11.69□□□□□ -0.54
H3F3A-201ENST00000366813 ALBP02768 609 aa11.68□□□□□ -0.54
H3F3A-201ENST00000366813 TRIM28Q13263 835 aaKnown RBP11.68□□□□□ -0.54
H3F3A-201ENST00000366813 CDCA8Q53HL2 280 aa11.68□□□□□ -0.54
H3F3A-201ENST00000366813 FAM200AQ8TCP9 573 aa11.68□□□□□ -0.54
H3F3A-201ENST00000366813 EFCC1Q9HA90 598 aa11.68□□□□□ -0.54
H3F3A-201ENST00000366813 EID1Q9Y6B2 187 aa11.68□□□□□ -0.54
H3F3A-201ENST00000366813 NCOA2Q15596 1464 aa11.68□□□□□ -0.54
H3F3A-201ENST00000366813 TGFBR3LH3BV60 316 aa11.67□□□□□ -0.54
H3F3A-201ENST00000366813 APBA3O96018 575 aa11.67□□□□□ -0.54
H3F3A-201ENST00000366813 IER5Q5VY09 327 aa11.67□□□□□ -0.54
H3F3A-201ENST00000366813 C8orf86Q6ZUL3 223 aa11.67□□□□□ -0.54
H3F3A-201ENST00000366813 C8orf37Q96NL8 207 aa11.67□□□□□ -0.54
H3F3A-201ENST00000366813 PRDM6Q9NQX0 595 aa11.67□□□□□ -0.54
H3F3A-201ENST00000366813 ZNF644Q9H582 1327 aaPredicted RBP11.67□□□□□ -0.54
H3F3A-201ENST00000366813 EPB42P16452 691 aa11.66□□□□□ -0.54
H3F3A-201ENST00000366813 GATA4P43694 442 aa11.66□□□□□ -0.54
H3F3A-201ENST00000366813 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.66□□□□□ -0.549e-21■■■■■ 39.3
H3F3A-201ENST00000366813 ARHGAP23Q9P227 1491 aa11.66□□□□□ -0.54
H3F3A-201ENST00000366813 PRDM15P57071 1507 aaPredicted RBP11.66□□□□□ -0.54
H3F3A-201ENST00000366813 EP400Q96L91 3159 aa11.65□□□□□ -0.54
H3F3A-201ENST00000366813 PLEKHH2Q8IVE3 1493 aa11.65□□□□□ -0.54
H3F3A-201ENST00000366813 ARHGAP35Q9NRY4 1499 aa11.65□□□□□ -0.54
H3F3A-201ENST00000366813 LILRB5O75023 590 aa11.65□□□□□ -0.54
H3F3A-201ENST00000366813 CCINQ13939 588 aa11.65□□□□□ -0.54
H3F3A-201ENST00000366813 TRAPPC3LQ5T215 181 aa11.65□□□□□ -0.54
H3F3A-201ENST00000366813 GSX2Q9BZM3 304 aa11.65□□□□□ -0.54
H3F3A-201ENST00000366813 KLK14Q9P0G3 267 aa11.65□□□□□ -0.54
H3F3A-201ENST00000366813 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.65□□□□□ -0.54
H3F3A-201ENST00000366813 ACIN1Q9UKV3 1341 aaKnown RBP11.65□□□□□ -0.54
H3F3A-201ENST00000366813 UBR1Q8IWV7 1749 aa11.64□□□□□ -0.55
H3F3A-201ENST00000366813 SLIT1O75093 1534 aa11.64□□□□□ -0.55
H3F3A-201ENST00000366813 SHPRHQ149N8 1683 aa11.64□□□□□ -0.55
H3F3A-201ENST00000366813 ERVK-7P63135 1459 aa11.64□□□□□ -0.55
H3F3A-201ENST00000366813 DGKZQ13574 1117 aa11.63□□□□□ -0.55
H3F3A-201ENST00000366813 DOC2BQ14184 412 aa11.63□□□□□ -0.55
H3F3A-201ENST00000366813 BCS1LQ9Y276 419 aa11.63□□□□□ -0.55
H3F3A-201ENST00000366813 TIAM1Q13009 1591 aa11.63□□□□□ -0.55
H3F3A-201ENST00000366813 FAM229AH3BQW9 127 aa11.62□□□□□ -0.55
H3F3A-201ENST00000366813 FOXO3O43524 673 aa11.62□□□□□ -0.55
H3F3A-201ENST00000366813 ATG7O95352 703 aa11.62□□□□□ -0.55
H3F3A-201ENST00000366813 YY1P25490 414 aa11.62□□□□□ -0.55
H3F3A-201ENST00000366813 WEE1P30291 646 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms