RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 SPDYE4A6NLX3 237 aa13.48□□□□□ -0.25
CDC42BPA-202ENST00000366764 RNF113AO15541 343 aaKnown RBP13.48□□□□□ -0.25
CDC42BPA-202ENST00000366764 MYL5Q02045 173 aa13.48□□□□□ -0.25
CDC42BPA-202ENST00000366764 DNAJC5BQ9UF47 199 aa13.48□□□□□ -0.25
CDC42BPA-202ENST00000366764 CETN2P41208 172 aa13.48□□□□□ -0.25
CDC42BPA-202ENST00000366764 GNAQP50148 359 aa13.48□□□□□ -0.25
CDC42BPA-202ENST00000366764 CALML4Q96GE6 196 aa13.48□□□□□ -0.25
CDC42BPA-202ENST00000366764 LARP6Q9BRS8 491 aaKnown RBP13.48□□□□□ -0.25
CDC42BPA-202ENST00000366764 TAOK3Q9H2K8 898 aa13.48□□□□□ -0.25
CDC42BPA-202ENST00000366764 KRT83P78385 493 aa13.48□□□□□ -0.25
CDC42BPA-202ENST00000366764 SPTY2D1Q68D10 685 aaPredicted RBP13.48□□□□□ -0.25
CDC42BPA-202ENST00000366764 CDC5LQ99459 802 aaKnown RBP13.48□□□□□ -0.25
CDC42BPA-202ENST00000366764 TRIM21P19474 475 aaKnown RBP13.48□□□□□ -0.25
CDC42BPA-202ENST00000366764 XAGE3Q8WTP9 111 aa13.48□□□□□ -0.25
CDC42BPA-202ENST00000366764 LMAN1P49257 510 aa13.47□□□□□ -0.25
CDC42BPA-202ENST00000366764 GOLGA6L10A0A0M3HER8 536 aa13.47□□□□□ -0.25
CDC42BPA-202ENST00000366764 ABCF2Q9UG63 623 aa13.47□□□□□ -0.25
CDC42BPA-202ENST00000366764 PTPDC1A2A3K4 754 aa13.47□□□□□ -0.25
CDC42BPA-202ENST00000366764 TRIM75PA6NK02 468 aa13.47□□□□□ -0.25
CDC42BPA-202ENST00000366764 PATL2C9JE40 543 aaKnown RBP13.47□□□□□ -0.25
CDC42BPA-202ENST00000366764 CALM1P0DP23 149 aa13.47□□□□□ -0.25
CDC42BPA-202ENST00000366764 CALM2P0DP24 149 aa13.47□□□□□ -0.25
CDC42BPA-202ENST00000366764 CALM3P0DP25 149 aa13.47□□□□□ -0.25
CDC42BPA-202ENST00000366764 TRIM14Q14142 442 aa13.47□□□□□ -0.25
CDC42BPA-202ENST00000366764 MAP3K19Q56UN5 1328 aa13.47□□□□□ -0.25
CDC42BPA-202ENST00000366764 CPSF1Q10570 1443 aaKnown RBP13.47□□□□□ -0.25
CDC42BPA-202ENST00000366764 KRT86O43790 486 aa13.47□□□□□ -0.25
CDC42BPA-202ENST00000366764 MTIF2P46199 727 aaKnown RBP13.47□□□□□ -0.25
CDC42BPA-202ENST00000366764 KRI1Q8N9T8 703 aaKnown RBP13.47□□□□□ -0.25
CDC42BPA-202ENST00000366764 SLC26A6Q9BXS9 759 aa13.47□□□□□ -0.25
CDC42BPA-202ENST00000366764 PLA2R1Q13018 1463 aa13.47□□□□□ -0.25
CDC42BPA-202ENST00000366764 MINDY4BA8MYZ0 360 aa13.46□□□□□ -0.25
CDC42BPA-202ENST00000366764 PSMA7O14818 248 aa13.46□□□□□ -0.25
CDC42BPA-202ENST00000366764 DDX21Q9NR30 783 aaKnown RBP eCLIP13.46□□□□□ -0.25
CDC42BPA-202ENST00000366764 PLEKHF1Q96S99 279 aa13.46□□□□□ -0.25
CDC42BPA-202ENST00000366764 PODXL2Q9NZ53 605 aa13.46□□□□□ -0.25
CDC42BPA-202ENST00000366764 STAP2Q9UGK3 403 aa13.46□□□□□ -0.25
CDC42BPA-202ENST00000366764 ATP2B3Q16720 1220 aa13.46□□□□□ -0.25
CDC42BPA-202ENST00000366764 LEO1Q8WVC0 666 aaPredicted RBP13.46□□□□□ -0.25
CDC42BPA-202ENST00000366764 TMEM63CQ9P1W3 806 aa13.46□□□□□ -0.25
CDC42BPA-202ENST00000366764 ZC3H6P61129 1189 aaKnown RBP13.46□□□□□ -0.26
CDC42BPA-202ENST00000366764 SEPT7Q16181 437 aaKnown RBP13.46□□□□□ -0.26
CDC42BPA-202ENST00000366764 OPA1O60313 960 aa13.46□□□□□ -0.26
CDC42BPA-202ENST00000366764 OTUD7AQ8TE49 926 aaPredicted RBP13.46□□□□□ -0.26
CDC42BPA-202ENST00000366764 LDHAL6AQ6ZMR3 332 aa13.45□□□□□ -0.26
CDC42BPA-202ENST00000366764 TRMT112Q9UI30 125 aaKnown RBP13.45□□□□□ -0.26
CDC42BPA-202ENST00000366764 SNX14Q9Y5W7 946 aa13.45□□□□□ -0.26
CDC42BPA-202ENST00000366764 RANBP6O60518 1105 aaKnown RBP13.45□□□□□ -0.26
CDC42BPA-202ENST00000366764 LMOD1P29536 600 aaPredicted RBP13.45□□□□□ -0.26
CDC42BPA-202ENST00000366764 ZFYVE27Q5T4F4 411 aa13.45□□□□□ -0.26
CDC42BPA-202ENST00000366764 HDXQ7Z353 690 aa13.45□□□□□ -0.26
CDC42BPA-202ENST00000366764 SSH3Q8TE77 659 aa13.45□□□□□ -0.26
CDC42BPA-202ENST00000366764 PRC1O43663 620 aa13.45□□□□□ -0.26
CDC42BPA-202ENST00000366764 GLI2P10070 1586 aa13.45□□□□□ -0.26
CDC42BPA-202ENST00000366764 RILPL1Q5EBL4 403 aa13.45□□□□□ -0.26
CDC42BPA-202ENST00000366764 MED14O60244 1454 aa13.45□□□□□ -0.26
CDC42BPA-202ENST00000366764 CCDC172P0C7W6 258 aa13.45□□□□□ -0.26
CDC42BPA-202ENST00000366764 POTEJP0CG39 1038 aa13.45□□□□□ -0.26
CDC42BPA-202ENST00000366764 BBXQ8WY36 941 aaPredicted RBP13.45□□□□□ -0.26
CDC42BPA-202ENST00000366764 NLRP5P59047 1200 aa13.45□□□□□ -0.26
CDC42BPA-202ENST00000366764 PPP1R2P41236 205 aa13.45□□□□□ -0.26
CDC42BPA-202ENST00000366764 CETN1Q12798 172 aa13.45□□□□□ -0.26
CDC42BPA-202ENST00000366764 MLH3Q9UHC1 1453 aa13.45□□□□□ -0.26
CDC42BPA-202ENST00000366764 GCOM1H8Y6P7 765 aaPredicted RBP13.45□□□□□ -0.26
CDC42BPA-202ENST00000366764 SLC27A2O14975 620 aa13.45□□□□□ -0.26
CDC42BPA-202ENST00000366764 MYZAPP0CAP1 466 aa13.45□□□□□ -0.26
CDC42BPA-202ENST00000366764 GBP2P32456 591 aaPredicted RBP13.45□□□□□ -0.26
CDC42BPA-202ENST00000366764 IP6K1Q92551 441 aa13.45□□□□□ -0.26
CDC42BPA-202ENST00000366764 IFNKQ9P0W0 207 aa13.45□□□□□ -0.26
CDC42BPA-202ENST00000366764 ABCA6Q8N139 1617 aa13.45□□□□□ -0.26
CDC42BPA-202ENST00000366764 BICDL2A1A5D9 508 aa13.44□□□□□ -0.26
CDC42BPA-202ENST00000366764 SSBP05455 408 aaKnown RBP eCLIP13.44□□□□□ -0.26
CDC42BPA-202ENST00000366764 PPP2R5BQ15173 497 aa13.44□□□□□ -0.26
CDC42BPA-202ENST00000366764 DDX12PQ92771 950 aa13.44□□□□□ -0.26
CDC42BPA-202ENST00000366764 EYA1Q99502 592 aa13.44□□□□□ -0.26
CDC42BPA-202ENST00000366764 PTCD1O75127 700 aaKnown RBP13.44□□□□□ -0.26
CDC42BPA-202ENST00000366764 TSGA10Q9BZW7 698 aa13.44□□□□□ -0.26
CDC42BPA-202ENST00000366764 MTMR7Q9Y216 660 aa13.44□□□□□ -0.26
CDC42BPA-202ENST00000366764 FMNL3Q8IVF7 1028 aa13.44□□□□□ -0.26
CDC42BPA-202ENST00000366764 MKNK2Q9HBH9 465 aa13.44□□□□□ -0.26
CDC42BPA-202ENST00000366764 JADE2Q9NQC1 790 aa13.44□□□□□ -0.26
CDC42BPA-202ENST00000366764 ARHGAP6O43182 974 aa13.44□□□□□ -0.26
CDC42BPA-202ENST00000366764 TICAM2Q86XR7 235 aa13.44□□□□□ -0.26
CDC42BPA-202ENST00000366764 EXOC1Q9NV70 894 aa13.44□□□□□ -0.26
CDC42BPA-202ENST00000366764 TCHHQ07283 1943 aa13.44□□□□□ -0.26
CDC42BPA-202ENST00000366764 FBLN1P23142 703 aa13.44□□□□□ -0.26
CDC42BPA-202ENST00000366764 YEATS2Q9ULM3 1422 aa13.44□□□□□ -0.26
CDC42BPA-202ENST00000366764 COPS6Q7L5N1 327 aa13.43□□□□□ -0.26
CDC42BPA-202ENST00000366764 DZIP1Q86YF9 867 aaKnown RBP13.43□□□□□ -0.26
CDC42BPA-202ENST00000366764 GSPT1P15170 499 aaKnown RBP13.43□□□□□ -0.26
CDC42BPA-202ENST00000366764 HAND2P61296 217 aa13.43□□□□□ -0.26
CDC42BPA-202ENST00000366764 GIMAP7Q8NHV1 300 aa13.43□□□□□ -0.26
CDC42BPA-202ENST00000366764 TRIM47Q96LD4 638 aa13.43□□□□□ -0.26
CDC42BPA-202ENST00000366764 IFFO1Q0D2I5 559 aa13.43□□□□□ -0.26
CDC42BPA-202ENST00000366764 ZHX3Q9H4I2 956 aa13.43□□□□□ -0.26
CDC42BPA-202ENST00000366764 MRFAP1L1Q96HT8 127 aa13.43□□□□□ -0.26
CDC42BPA-202ENST00000366764 FOXO3O43524 673 aa13.43□□□□□ -0.26
CDC42BPA-202ENST00000366764 TACC1O75410 805 aa13.43□□□□□ -0.26
CDC42BPA-202ENST00000366764 BAG3O95817 575 aa13.43□□□□□ -0.26
CDC42BPA-202ENST00000366764 AKR1B10O60218 316 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms