RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 FAM13BQ9NYF5 915 aa8.22□□□□□ -1.09
RNU4-4P-201ENST00000364588 SLAIN2Q9P270 581 aa8.22□□□□□ -1.09
RNU4-4P-201ENST00000364588 MTMR7Q9Y216 660 aa8.22□□□□□ -1.09
RNU4-4P-201ENST00000364588 CEP170BQ9Y4F5 1589 aaPredicted RBP8.22□□□□□ -1.09
RNU4-4P-201ENST00000364588 DISP3Q9P2K9 1392 aa8.22□□□□□ -1.09
RNU4-4P-201ENST00000364588 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.21□□□□□ -1.1
RNU4-4P-201ENST00000364588 ZNF335Q9H4Z2 1342 aaPredicted RBP8.21□□□□□ -1.1
RNU4-4P-201ENST00000364588 GNB5O14775 395 aa8.2□□□□□ -1.1
RNU4-4P-201ENST00000364588 NFKB1P19838 968 aa8.2□□□□□ -1.1
RNU4-4P-201ENST00000364588 RASSF7Q02833 373 aa8.2□□□□□ -1.1
RNU4-4P-201ENST00000364588 ALYREFQ86V81 257 aaKnown RBP8.2□□□□□ -1.1
RNU4-4P-201ENST00000364588 TMEM151AQ8N4L1 468 aa8.2□□□□□ -1.1
RNU4-4P-201ENST00000364588 GSX2Q9BZM3 304 aa8.2□□□□□ -1.1
RNU4-4P-201ENST00000364588 SAP130Q9H0E3 1048 aa8.2□□□□□ -1.1
RNU4-4P-201ENST00000364588 NOP53Q9NZM5 478 aaKnown RBP8.2□□□□□ -1.1
RNU4-4P-201ENST00000364588 CAMSAP2Q08AD1 1489 aa8.19□□□□□ -1.1
RNU4-4P-201ENST00000364588 NCOA2Q15596 1464 aa8.19□□□□□ -1.1
RNU4-4P-201ENST00000364588 TNFRSF10BO14763 440 aa8.19□□□□□ -1.1
RNU4-4P-201ENST00000364588 KIF3BO15066 747 aa8.19□□□□□ -1.1
RNU4-4P-201ENST00000364588 ARID4AP29374 1257 aaPredicted RBP8.19□□□□□ -1.1
RNU4-4P-201ENST00000364588 SNRPNP63162 240 aaKnown RBP8.19□□□□□ -1.1
RNU4-4P-201ENST00000364588 NAA30Q147X3 362 aaPredicted RBP8.19□□□□□ -1.1
RNU4-4P-201ENST00000364588 PCSK7Q16549 785 aa8.19□□□□□ -1.1
RNU4-4P-201ENST00000364588 ILDR2Q71H61 639 aa8.19□□□□□ -1.1
RNU4-4P-201ENST00000364588 ETFBKMTQ8IXQ9 262 aa8.19□□□□□ -1.1
RNU4-4P-201ENST00000364588 UBE2OQ9C0C9 1292 aaKnown RBP8.19□□□□□ -1.1
RNU4-4P-201ENST00000364588 STIM2Q9P246 746 aa8.19□□□□□ -1.1
RNU4-4P-201ENST00000364588 RTCBQ9Y3I0 505 aaKnown RBP8.19□□□□□ -1.1
RNU4-4P-201ENST00000364588 CNTNAP5Q8WYK1 1306 aa8.19□□□□□ -1.1
RNU4-4P-201ENST00000364588 DHX29Q7Z478 1369 aaKnown RBP8.19□□□□□ -1.1
RNU4-4P-201ENST00000364588 RTEL1-TNFRSF6BF6WH68 1400 aa8.19□□□□□ -1.1
RNU4-4P-201ENST00000364588 PLA2R1Q13018 1463 aa8.19□□□□□ -1.1
RNU4-4P-201ENST00000364588 CCDC141Q6ZP82 1450 aa8.19□□□□□ -1.1
RNU4-4P-201ENST00000364588 DNMT1P26358 1616 aaKnown RBP8.18□□□□□ -1.1
RNU4-4P-201ENST00000364588 MAP3K6O95382 1288 aa8.18□□□□□ -1.1
RNU4-4P-201ENST00000364588 GDF11O95390 407 aa8.18□□□□□ -1.1
RNU4-4P-201ENST00000364588 SSFA2P28290 1259 aa8.18□□□□□ -1.1
RNU4-4P-201ENST00000364588 GRNP28799 593 aaKnown RBP8.18□□□□□ -1.1
RNU4-4P-201ENST00000364588 PDE4CQ08493 712 aa8.18□□□□□ -1.1
RNU4-4P-201ENST00000364588 CAPN12Q6ZSI9 719 aa8.18□□□□□ -1.1
RNU4-4P-201ENST00000364588 RGL4Q8IZJ4 473 aa8.18□□□□□ -1.1
RNU4-4P-201ENST00000364588 HELQQ8TDG4 1101 aa8.18□□□□□ -1.1
RNU4-4P-201ENST00000364588 TCOF1Q13428 1488 aaKnown RBP8.18□□□□□ -1.1
RNU4-4P-201ENST00000364588 IQSEC2Q5JU85 1478 aa8.18□□□□□ -1.1
RNU4-4P-201ENST00000364588 SPATA31D1Q6ZQQ2 1576 aa8.18□□□□□ -1.1
RNU4-4P-201ENST00000364588 EGFRP00533 1210 aa8.17□□□□□ -1.1
RNU4-4P-201ENST00000364588 HOXB4P17483 251 aaPredicted RBP8.17□□□□□ -1.1
RNU4-4P-201ENST00000364588 GSK3AP49840 483 aa8.17□□□□□ -1.1
RNU4-4P-201ENST00000364588 TBC1D8BQ0IIM8 1120 aa8.17□□□□□ -1.1
RNU4-4P-201ENST00000364588 A2ML1A8K2U0 1454 aa8.17□□□□□ -1.1
RNU4-4P-201ENST00000364588 POLR1AO95602 1720 aaPredicted RBP8.17□□□□□ -1.1
RNU4-4P-201ENST00000364588 UBAP1LF5GYI3 381 aa8.16□□□□□ -1.1
RNU4-4P-201ENST00000364588 OPLAHO14841 1288 aa8.16□□□□□ -1.1
RNU4-4P-201ENST00000364588 XYLBO75191 536 aa8.16□□□□□ -1.1
RNU4-4P-201ENST00000364588 RARAP10276 462 aa8.16□□□□□ -1.1
RNU4-4P-201ENST00000364588 ZAP70P43403 619 aa8.16□□□□□ -1.1
RNU4-4P-201ENST00000364588 PIK3R5Q8WYR1 880 aa8.16□□□□□ -1.1
RNU4-4P-201ENST00000364588 TNRQ92752 1358 aa8.16□□□□□ -1.1
RNU4-4P-201ENST00000364588 KDM5DQ9BY66 1539 aa8.16□□□□□ -1.1
RNU4-4P-201ENST00000364588 SEPT3Q9UH03 358 aa8.16□□□□□ -1.1
RNU4-4P-201ENST00000364588 SLC6A14Q9UN76 642 aa8.16□□□□□ -1.1
RNU4-4P-201ENST00000364588 WASHC2CQ9Y4E1 1318 aa8.16□□□□□ -1.1
RNU4-4P-201ENST00000364588 ARHGEF5Q12774 1597 aa8.15□□□□□ -1.1
RNU4-4P-201ENST00000364588 PZPP20742 1482 aa8.15□□□□□ -1.1
RNU4-4P-201ENST00000364588 LOC105371045A0A1W2PR82 267 aa8.15□□□□□ -1.1
RNU4-4P-201ENST00000364588 SPDYE3A6NKU9 549 aa8.15□□□□□ -1.1
RNU4-4P-201ENST00000364588 CMTR1Q8N1G2 835 aaKnown RBP8.15□□□□□ -1.1
RNU4-4P-201ENST00000364588 PRDM6Q9NQX0 595 aa8.15□□□□□ -1.1
RNU4-4P-201ENST00000364588 DNAJB12Q9NXW2 375 aaKnown RBP8.15□□□□□ -1.1
RNU4-4P-201ENST00000364588 NEURL4Q96JN8 1562 aa8.14□□□□□ -1.11
RNU4-4P-201ENST00000364588 M0R082 166 aa8.14□□□□□ -1.11
RNU4-4P-201ENST00000364588 TSPY4P0CV99 314 aa8.14□□□□□ -1.11
RNU4-4P-201ENST00000364588 TSPY10P0CW01 314 aa8.14□□□□□ -1.11
RNU4-4P-201ENST00000364588 LINC00114Q6XXX2 140 aa8.14□□□□□ -1.11
RNU4-4P-201ENST00000364588 KRT25Q7Z3Z0 450 aa8.14□□□□□ -1.11
RNU4-4P-201ENST00000364588 ZNF417Q8TAU3 575 aa8.14□□□□□ -1.11
RNU4-4P-201ENST00000364588 ZNF587Q96SQ5 575 aaPredicted RBP8.14□□□□□ -1.11
RNU4-4P-201ENST00000364588 IGFLR1Q9H665 355 aa8.14□□□□□ -1.11
RNU4-4P-201ENST00000364588 FNDC3AQ9Y2H6 1198 aaKnown RBP8.14□□□□□ -1.11
RNU4-4P-201ENST00000364588 LRRC9Q6ZRR7 1453 aa8.13□□□□□ -1.11
RNU4-4P-201ENST00000364588 VPS8Q8N3P4 1428 aa8.13□□□□□ -1.11
RNU4-4P-201ENST00000364588 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.13□□□□□ -1.11
RNU4-4P-201ENST00000364588 ALBP02768 609 aa8.13□□□□□ -1.11
RNU4-4P-201ENST00000364588 GPLD1P80108 840 aa8.13□□□□□ -1.11
RNU4-4P-201ENST00000364588 DHX32Q7L7V1 743 aaKnown RBP8.13□□□□□ -1.11
RNU4-4P-201ENST00000364588 USP20Q9Y2K6 914 aa8.13□□□□□ -1.11
RNU4-4P-201ENST00000364588 KCNMB2Q9Y691 235 aa8.13□□□□□ -1.11
RNU4-4P-201ENST00000364588 CFAP65Q6ZU64 1925 aaKnown RBP8.13□□□□□ -1.11
RNU4-4P-201ENST00000364588 FAM135AQ9P2D6 1515 aa8.13□□□□□ -1.11
RNU4-4P-201ENST00000364588 SASH3O75995 380 aa8.12□□□□□ -1.11
RNU4-4P-201ENST00000364588 RPLP1P05386 114 aaKnown RBP8.12□□□□□ -1.11
RNU4-4P-201ENST00000364588 SOX18P35713 384 aa8.12□□□□□ -1.11
RNU4-4P-201ENST00000364588 NRLP54845 237 aa8.12□□□□□ -1.11
RNU4-4P-201ENST00000364588 RETREG2Q8NC44 543 aa8.12□□□□□ -1.11
RNU4-4P-201ENST00000364588 GTF3C2Q8WUA4 911 aaPredicted RBP8.12□□□□□ -1.11
RNU4-4P-201ENST00000364588 DCAF5Q96JK2 942 aa8.12□□□□□ -1.11
RNU4-4P-201ENST00000364588 ZFATQ9P243 1243 aa8.12□□□□□ -1.11
RNU4-4P-201ENST00000364588 CEP152O94986 1710 aa8.12□□□□□ -1.11
RNU4-4P-201ENST00000364588 MIA2Q96PC5 1412 aa8.12□□□□□ -1.11
RNU4-4P-201ENST00000364588 RNF17Q9BXT8 1623 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms