RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 PTPN14Q15678 1187 aa15.44■□□□□ 0.06
LDB3-202ENST00000361373 NAP1L4Q99733 375 aaKnown RBP15.44■□□□□ 0.06
LDB3-202ENST00000361373 CLIP2Q9UDT6 1046 aa15.44■□□□□ 0.06
LDB3-202ENST00000361373 TRIM75PA6NK02 468 aa15.44■□□□□ 0.06
LDB3-202ENST00000361373 CHMLP26374 656 aa15.44■□□□□ 0.06
LDB3-202ENST00000361373 CREB3L3Q68CJ9 461 aa15.44■□□□□ 0.06
LDB3-202ENST00000361373 INTS4Q96HW7 963 aaKnown RBP15.44■□□□□ 0.06
LDB3-202ENST00000361373 TRIM35Q9UPQ4 493 aa15.44■□□□□ 0.06
LDB3-202ENST00000361373 HIBADHP31937 336 aaKnown RBP15.44■□□□□ 0.06
LDB3-202ENST00000361373 PRIM1P49642 420 aaKnown RBP15.44■□□□□ 0.06
LDB3-202ENST00000361373 RBM28Q9NW13 759 aaKnown RBP15.44■□□□□ 0.06
LDB3-202ENST00000361373 GOLGA6L9A6NEM1 432 aa15.43■□□□□ 0.06
LDB3-202ENST00000361373 C16orf71Q8IYS4 520 aaPredicted RBP15.43■□□□□ 0.06
LDB3-202ENST00000361373 UBXN4Q92575 508 aa15.43■□□□□ 0.06
LDB3-202ENST00000361373 EXOC1Q9NV70 894 aa15.43■□□□□ 0.06
LDB3-202ENST00000361373 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.43■□□□□ 0.06
LDB3-202ENST00000361373 CCDC172P0C7W6 258 aa15.43■□□□□ 0.06
LDB3-202ENST00000361373 SSR1P43307 286 aaKnown RBP15.43■□□□□ 0.06
LDB3-202ENST00000361373 HEATR3Q7Z4Q2 680 aa15.43■□□□□ 0.06
LDB3-202ENST00000361373 SYCP3Q8IZU3 236 aa15.43■□□□□ 0.06
LDB3-202ENST00000361373 NECAB1Q8N987 351 aa15.43■□□□□ 0.06
LDB3-202ENST00000361373 SMARCC2Q8TAQ2 1214 aa15.43■□□□□ 0.06
LDB3-202ENST00000361373 WDR66Q8TBY9 1149 aa15.43■□□□□ 0.06
LDB3-202ENST00000361373 NUP88Q99567 741 aaPredicted RBP15.43■□□□□ 0.06
LDB3-202ENST00000361373 A0A1B0GUL7 405 aa15.43■□□□□ 0.06
LDB3-202ENST00000361373 MRPS27Q92552 414 aaKnown RBP15.43■□□□□ 0.06
LDB3-202ENST00000361373 LGR6Q9HBX8 967 aa15.43■□□□□ 0.06
LDB3-202ENST00000361373 PRKCSHP14314 528 aaPredicted RBP15.42■□□□□ 0.06
LDB3-202ENST00000361373 TNNI3KQ59H18 835 aa15.42■□□□□ 0.06
LDB3-202ENST00000361373 ATL3Q6DD88 541 aa15.42■□□□□ 0.06
LDB3-202ENST00000361373 G2E3Q7L622 706 aa15.42■□□□□ 0.06
LDB3-202ENST00000361373 FPGT-TNNI3KV9GXZ4 949 aa15.42■□□□□ 0.06
LDB3-202ENST00000361373 SUPT20HQ8NEM7 779 aa15.42■□□□□ 0.06
LDB3-202ENST00000361373 KIF18AQ8NI77 898 aa15.42■□□□□ 0.06
LDB3-202ENST00000361373 KAT6BQ8WYB5 2073 aa15.42■□□□□ 0.06
LDB3-202ENST00000361373 MCM3P25205 808 aa15.42■□□□□ 0.06
LDB3-202ENST00000361373 BRAPQ7Z569 592 aa15.42■□□□□ 0.06
LDB3-202ENST00000361373 GGA1Q9UJY5 639 aa15.42■□□□□ 0.06
LDB3-202ENST00000361373 USP21Q9UK80 565 aa15.42■□□□□ 0.06
LDB3-202ENST00000361373 EIF4A1P60842 406 aaKnown RBP15.42■□□□□ 0.06
LDB3-202ENST00000361373 FLAD1Q8NFF5 587 aa15.42■□□□□ 0.06
LDB3-202ENST00000361373 VEZTQ9HBM0 779 aa15.42■□□□□ 0.06
LDB3-202ENST00000361373 KDM5DQ9BY66 1539 aa15.41■□□□□ 0.06
LDB3-202ENST00000361373 RAB11FIP4Q86YS3 637 aa15.41■□□□□ 0.06
LDB3-202ENST00000361373 LPIN2Q92539 896 aa15.41■□□□□ 0.06
LDB3-202ENST00000361373 SPDYE3A6NKU9 549 aa15.41■□□□□ 0.06
LDB3-202ENST00000361373 CHMP4BP1P59074 171 aa15.41■□□□□ 0.06
LDB3-202ENST00000361373 GCKRQ14397 625 aa15.41■□□□□ 0.06
LDB3-202ENST00000361373 TDRD12Q587J7 1177 aaKnown RBP15.41■□□□□ 0.06
LDB3-202ENST00000361373 CTAGE1Q96RT6 745 aa15.41■□□□□ 0.06
LDB3-202ENST00000361373 BRPF3Q9ULD4 1205 aa15.41■□□□□ 0.06
LDB3-202ENST00000361373 TCERG1LQ5VWI1 586 aa15.41■□□□□ 0.06
LDB3-202ENST00000361373 AATKQ6ZMQ8 1374 aa15.41■□□□□ 0.06
LDB3-202ENST00000361373 CCDC174Q6PII3 467 aa15.41■□□□□ 0.06
LDB3-202ENST00000361373 MPNDQ8N594 471 aa15.41■□□□□ 0.06
LDB3-202ENST00000361373 HOOK2Q96ED9 719 aa15.41■□□□□ 0.06
LDB3-202ENST00000361373 TMEM87BQ96K49 555 aa15.41■□□□□ 0.06
LDB3-202ENST00000361373 LRRC2Q9BYS8 371 aa15.41■□□□□ 0.06
LDB3-202ENST00000361373 MROH5Q6ZUA9 1318 aa15.4■□□□□ 0.06
LDB3-202ENST00000361373 UFL1O94874 794 aa15.4■□□□□ 0.06
LDB3-202ENST00000361373 LMOD1P29536 600 aaPredicted RBP15.4■□□□□ 0.06
LDB3-202ENST00000361373 PDE6BP35913 854 aa15.4■□□□□ 0.06
LDB3-202ENST00000361373 STAT6P42226 847 aa15.4■□□□□ 0.06
LDB3-202ENST00000361373 PAFAH1B1P43034 410 aa15.4■□□□□ 0.06
LDB3-202ENST00000361373 FAM98CQ17RN3 349 aaKnown RBP15.4■□□□□ 0.06
LDB3-202ENST00000361373 SLC4A8Q2Y0W8 1093 aa15.4■□□□□ 0.06
LDB3-202ENST00000361373 DNAJC10Q8IXB1 793 aa15.4■□□□□ 0.06
LDB3-202ENST00000361373 PDCL2Q8N4E4 241 aa15.4■□□□□ 0.06
LDB3-202ENST00000361373 ZNF496Q96IT1 587 aaPredicted RBP15.4■□□□□ 0.06
LDB3-202ENST00000361373 GCC2Q8IWJ2 1684 aa15.4■□□□□ 0.06
LDB3-202ENST00000361373 NLRP1Q9C000 1473 aa15.4■□□□□ 0.06
LDB3-202ENST00000361373 LEKR1Q6ZMV7 388 aa15.4■□□□□ 0.06
LDB3-202ENST00000361373 APPBP2Q92624 585 aa15.4■□□□□ 0.06
LDB3-202ENST00000361373 GDPD2Q9HCC8 539 aa15.4■□□□□ 0.06
LDB3-202ENST00000361373 RUFY3Q7L099 469 aa15.4■□□□□ 0.06
LDB3-202ENST00000361373 MIGA1Q8NAN2 632 aa15.4■□□□□ 0.06
LDB3-202ENST00000361373 FAM135BQ49AJ0 1406 aa15.4■□□□□ 0.06
LDB3-202ENST00000361373 F13A1P00488 732 aa15.39■□□□□ 0.05
LDB3-202ENST00000361373 A1BGP04217 495 aa15.39■□□□□ 0.05
LDB3-202ENST00000361373 TEX11Q8IYF3 940 aa15.39■□□□□ 0.05
LDB3-202ENST00000361373 GLT8D2Q9H1C3 349 aa15.39■□□□□ 0.05
LDB3-202ENST00000361373 MAGI3Q5TCQ9 1506 aa15.39■□□□□ 0.05
LDB3-202ENST00000361373 ZMYM4Q5VZL5 1548 aa15.39■□□□□ 0.05
LDB3-202ENST00000361373 USP19O94966 1318 aa15.39■□□□□ 0.05
LDB3-202ENST00000361373 MBD4O95243 580 aa15.39■□□□□ 0.05
LDB3-202ENST00000361373 TRIM47Q96LD4 638 aa15.39■□□□□ 0.05
LDB3-202ENST00000361373 TCEANC2Q96MN5 208 aa15.39■□□□□ 0.05
LDB3-202ENST00000361373 PANK2Q9BZ23 570 aa15.39■□□□□ 0.05
LDB3-202ENST00000361373 KIF4BQ2VIQ3 1234 aa15.39■□□□□ 0.05
LDB3-202ENST00000361373 KRT79Q5XKE5 535 aa15.39■□□□□ 0.05
LDB3-202ENST00000361373 NPHP4O75161 1426 aaPredicted RBP15.39■□□□□ 0.05
LDB3-202ENST00000361373 PATL2C9JE40 543 aaKnown RBP15.38■□□□□ 0.05
LDB3-202ENST00000361373 BIN1O00499 593 aa15.38■□□□□ 0.05
LDB3-202ENST00000361373 PSMA7O14818 248 aa15.38■□□□□ 0.05
LDB3-202ENST00000361373 MAP9Q49MG5 647 aa15.38■□□□□ 0.05
LDB3-202ENST00000361373 CLEC11AQ9Y240 323 aa15.38■□□□□ 0.05
LDB3-202ENST00000361373 MYOM2P54296 1465 aa15.38■□□□□ 0.05
LDB3-202ENST00000361373 H0YIN7 160 aa15.38■□□□□ 0.05
LDB3-202ENST00000361373 RIMBP2O15034 1052 aa15.38■□□□□ 0.05
LDB3-202ENST00000361373 HCLS1P14317 486 aaPredicted RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 146 ms