RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 GKAP1Q5VSY0 366 aaPredicted RBP14.9□□□□□ -0.02
SRGAP3-201ENST00000360413 RNF10Q8N5U6 811 aaKnown RBP14.9□□□□□ -0.02
SRGAP3-201ENST00000360413 CCT6BQ92526 530 aa14.9□□□□□ -0.02
SRGAP3-201ENST00000360413 PPFIA2O75334 1257 aa14.89□□□□□ -0.03
SRGAP3-201ENST00000360413 PEX19P40855 299 aa14.89□□□□□ -0.03
SRGAP3-201ENST00000360413 NUTM2GQ5VZR2 741 aa14.89□□□□□ -0.03
SRGAP3-201ENST00000360413 TMOD3Q9NYL9 352 aa14.89□□□□□ -0.03
SRGAP3-201ENST00000360413 GIPC1O14908 333 aa14.89□□□□□ -0.03
SRGAP3-201ENST00000360413 C20orf194Q5TEA3 1177 aa14.89□□□□□ -0.03
SRGAP3-201ENST00000360413 SRGAP1Q7Z6B7 1085 aa14.89□□□□□ -0.03
SRGAP3-201ENST00000360413 MINDY4BA8MYZ0 360 aa14.89□□□□□ -0.03
SRGAP3-201ENST00000360413 CHMP4BP1P59074 171 aa14.89□□□□□ -0.03
SRGAP3-201ENST00000360413 CCDC141Q6ZP82 1450 aa14.89□□□□□ -0.03
SRGAP3-201ENST00000360413 GNAQP50148 359 aa14.89□□□□□ -0.03
SRGAP3-201ENST00000360413 SLFN5Q08AF3 891 aa14.89□□□□□ -0.03
SRGAP3-201ENST00000360413 NKIRAS1Q9NYS0 192 aa14.89□□□□□ -0.03
SRGAP3-201ENST00000360413 ZC3H6P61129 1189 aaKnown RBP14.88□□□□□ -0.03
SRGAP3-201ENST00000360413 ZBTB17Q13105 803 aa14.88□□□□□ -0.03
SRGAP3-201ENST00000360413 TXNDC2Q86VQ3 553 aa14.88□□□□□ -0.03
SRGAP3-201ENST00000360413 MTRF1LQ9UGC7 380 aaKnown RBP14.88□□□□□ -0.03
SRGAP3-201ENST00000360413 TAF12Q16514 161 aa14.88□□□□□ -0.03
SRGAP3-201ENST00000360413 STMN1P16949 149 aa14.88□□□□□ -0.03
SRGAP3-201ENST00000360413 RBBP5Q15291 538 aaKnown RBP14.88□□□□□ -0.03
SRGAP3-201ENST00000360413 TSGA10Q9BZW7 698 aa14.88□□□□□ -0.03
SRGAP3-201ENST00000360413 EHBP1L1Q8N3D4 1523 aa14.88□□□□□ -0.03
SRGAP3-201ENST00000360413 ANKLE2Q86XL3 938 aa14.88□□□□□ -0.03
SRGAP3-201ENST00000360413 BOLA2Q9H3K6 86 aa14.88□□□□□ -0.03
SRGAP3-201ENST00000360413 TPX2Q9ULW0 747 aaKnown RBP14.88□□□□□ -0.03
SRGAP3-201ENST00000360413 TYRO3Q06418 890 aa14.88□□□□□ -0.03
SRGAP3-201ENST00000360413 CLUL1Q15846 466 aa14.88□□□□□ -0.03
SRGAP3-201ENST00000360413 PNMA8AQ86V59 439 aaPredicted RBP14.88□□□□□ -0.03
SRGAP3-201ENST00000360413 FLIIQ13045 1269 aa14.88□□□□□ -0.03
SRGAP3-201ENST00000360413 PRR16Q569H4 304 aa14.88□□□□□ -0.03
SRGAP3-201ENST00000360413 MYRIPQ8NFW9 859 aa14.88□□□□□ -0.03
SRGAP3-201ENST00000360413 RTEL1-TNFRSF6BF6WH68 1400 aa14.88□□□□□ -0.03
SRGAP3-201ENST00000360413 IDEP14735 1019 aa14.87□□□□□ -0.03
SRGAP3-201ENST00000360413 FYB2Q5VWT5 728 aa14.87□□□□□ -0.03
SRGAP3-201ENST00000360413 MCUR1Q96AQ8 359 aa14.87□□□□□ -0.03
SRGAP3-201ENST00000360413 RIOK3O14730 519 aaKnown RBP14.87□□□□□ -0.03
SRGAP3-201ENST00000360413 SATB1Q01826 763 aa14.87□□□□□ -0.03
SRGAP3-201ENST00000360413 GSDMBQ8TAX9 411 aa14.87□□□□□ -0.03
SRGAP3-201ENST00000360413 TMOD4Q9NZQ9 345 aa14.87□□□□□ -0.03
SRGAP3-201ENST00000360413 EFCAB5A4FU69 1503 aa14.87□□□□□ -0.03
SRGAP3-201ENST00000360413 MYCNP04198 464 aaPredicted RBP14.87□□□□□ -0.03
SRGAP3-201ENST00000360413 GPR161Q8N6U8 529 aaKnown RBP14.87□□□□□ -0.03
SRGAP3-201ENST00000360413 SPAG5Q96R06 1193 aa14.87□□□□□ -0.03
SRGAP3-201ENST00000360413 MMRN2Q9H8L6 949 aa14.87□□□□□ -0.03
SRGAP3-201ENST00000360413 RRAGDQ9NQL2 400 aaPredicted RBP14.87□□□□□ -0.03
SRGAP3-201ENST00000360413 ABCC11Q96J66 1382 aa14.87□□□□□ -0.03
SRGAP3-201ENST00000360413 FGD6Q6ZV73 1430 aa14.86□□□□□ -0.03
SRGAP3-201ENST00000360413 ZNF131P52739 623 aa14.86□□□□□ -0.03
SRGAP3-201ENST00000360413 ZMAT2Q96NC0 199 aaKnown RBP14.86□□□□□ -0.03
SRGAP3-201ENST00000360413 FANCD2Q9BXW9 1451 aa14.86□□□□□ -0.03
SRGAP3-201ENST00000360413 FCHSD2O94868 740 aa14.86□□□□□ -0.03
SRGAP3-201ENST00000360413 CA8P35219 290 aa14.86□□□□□ -0.03
SRGAP3-201ENST00000360413 TXNDC9O14530 226 aa14.86□□□□□ -0.03
SRGAP3-201ENST00000360413 RRAGBQ5VZM2 374 aa14.86□□□□□ -0.03
SRGAP3-201ENST00000360413 CYB5RLQ6IPT4 315 aa14.86□□□□□ -0.03
SRGAP3-201ENST00000360413 MIER3Q7Z3K6 550 aa14.86□□□□□ -0.03
SRGAP3-201ENST00000360413 CCDC89Q8N998 374 aa14.86□□□□□ -0.03
SRGAP3-201ENST00000360413 RABEP2Q9H5N1 569 aa14.86□□□□□ -0.03
SRGAP3-201ENST00000360413 KAT14Q9H8E8 782 aa14.86□□□□□ -0.03
SRGAP3-201ENST00000360413 GOLGA8AA7E2F4 631 aa14.86□□□□□ -0.03
SRGAP3-201ENST00000360413 RANBP6O60518 1105 aaKnown RBP14.86□□□□□ -0.03
SRGAP3-201ENST00000360413 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.86□□□□□ -0.03
SRGAP3-201ENST00000360413 LMOD1P29536 600 aaPredicted RBP14.86□□□□□ -0.03
SRGAP3-201ENST00000360413 TRIM68Q6AZZ1 485 aa14.86□□□□□ -0.03
SRGAP3-201ENST00000360413 MAK16Q9BXY0 300 aaKnown RBP14.86□□□□□ -0.03
SRGAP3-201ENST00000360413 TNNC1P63316 161 aa14.86□□□□□ -0.03
SRGAP3-201ENST00000360413 ZSCAN26Q16670 478 aa14.86□□□□□ -0.03
SRGAP3-201ENST00000360413 CETN3O15182 167 aa14.85□□□□□ -0.03
SRGAP3-201ENST00000360413 TRIM4Q9C037 500 aa14.85□□□□□ -0.03
SRGAP3-201ENST00000360413 TMEM110-MUSTN1A8MSY1 372 aa14.85□□□□□ -0.03
SRGAP3-201ENST00000360413 PFDN1O60925 122 aa14.85□□□□□ -0.03
SRGAP3-201ENST00000360413 PPP1R7Q15435 360 aa14.85□□□□□ -0.03
SRGAP3-201ENST00000360413 WDR97A6NE52 1622 aa14.85□□□□□ -0.03
SRGAP3-201ENST00000360413 AFMP43652 599 aa14.85□□□□□ -0.03
SRGAP3-201ENST00000360413 SULT6B1Q6IMI4 303 aa14.85□□□□□ -0.03
SRGAP3-201ENST00000360413 TAOK1Q7L7X3 1001 aa14.85□□□□□ -0.03
SRGAP3-201ENST00000360413 SPATS2LQ9NUQ6 558 aaKnown RBP14.85□□□□□ -0.03
SRGAP3-201ENST00000360413 STK10O94804 968 aaKnown RBP14.85□□□□□ -0.03
SRGAP3-201ENST00000360413 ELF2Q15723 593 aa14.85□□□□□ -0.03
SRGAP3-201ENST00000360413 GIGYF1O75420 1035 aaPredicted RBP14.85□□□□□ -0.03
SRGAP3-201ENST00000360413 COG7P83436 770 aa14.85□□□□□ -0.03
SRGAP3-201ENST00000360413 CCDC62Q6P9F0 684 aa14.85□□□□□ -0.03
SRGAP3-201ENST00000360413 KCNG4Q8TDN1 519 aa14.85□□□□□ -0.03
SRGAP3-201ENST00000360413 FAM135AQ9P2D6 1515 aa14.85□□□□□ -0.03
SRGAP3-201ENST00000360413 CNNM2Q9H8M5 875 aa14.85□□□□□ -0.03
SRGAP3-201ENST00000360413 DACT1Q9NYF0 836 aa14.85□□□□□ -0.03
SRGAP3-201ENST00000360413 BICDL2A1A5D9 508 aa14.84□□□□□ -0.03
SRGAP3-201ENST00000360413 CRCPO75575 148 aa14.84□□□□□ -0.03
SRGAP3-201ENST00000360413 C6orf50Q9HD87 102 aa14.84□□□□□ -0.03
SRGAP3-201ENST00000360413 OAS2P29728 719 aaKnown RBP14.84□□□□□ -0.03
SRGAP3-201ENST00000360413 MUM1Q2TAK8 710 aa14.84□□□□□ -0.03
SRGAP3-201ENST00000360413 MORC4Q8TE76 937 aa14.84□□□□□ -0.03
SRGAP3-201ENST00000360413 BAIAP2L1Q9UHR4 511 aa14.84□□□□□ -0.03
SRGAP3-201ENST00000360413 ZBTB24O43167 697 aaPredicted RBP14.84□□□□□ -0.03
SRGAP3-201ENST00000360413 ST5P78524 1137 aa14.84□□□□□ -0.03
SRGAP3-201ENST00000360413 ARID5AQ03989 594 aa14.84□□□□□ -0.03
SRGAP3-201ENST00000360413 CCDC42Q96M95 316 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms