RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 AMOTL1Q8IY63 956 aa5.29□□□□□ -1.56
PTPN22-201ENST00000359785 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.29□□□□□ -1.56
PTPN22-201ENST00000359785 LIN7AO14910 233 aaPredicted RBP5.29□□□□□ -1.56
PTPN22-201ENST00000359785 PRPF6O94906 941 aaKnown RBP5.29□□□□□ -1.56
PTPN22-201ENST00000359785 NBPF7P0C2Y1 421 aaPredicted RBP5.29□□□□□ -1.56
PTPN22-201ENST00000359785 NCAPHQ15003 741 aa5.29□□□□□ -1.56
PTPN22-201ENST00000359785 CC2D1AQ6P1N0 951 aaPredicted RBP5.29□□□□□ -1.56
PTPN22-201ENST00000359785 FAM177A1Q8N128 213 aaPredicted RBP5.29□□□□□ -1.56
PTPN22-201ENST00000359785 THEMISQ8N1K5 641 aaPredicted RBP5.29□□□□□ -1.56
PTPN22-201ENST00000359785 ZNF646O15015 1829 aaPredicted RBP5.28□□□□□ -1.56
PTPN22-201ENST00000359785 SH2B2O14492 632 aaPredicted RBP5.28□□□□□ -1.56
PTPN22-201ENST00000359785 DHX16O60231 1041 aaKnown RBP5.28□□□□□ -1.56
PTPN22-201ENST00000359785 NNTQ13423 1086 aa5.28□□□□□ -1.56
PTPN22-201ENST00000359785 IDI1Q13907 227 aa5.28□□□□□ -1.56
PTPN22-201ENST00000359785 SPDYCQ5MJ68 293 aa5.28□□□□□ -1.56
PTPN22-201ENST00000359785 ANKRD45Q5TZF3 282 aa5.28□□□□□ -1.56
PTPN22-201ENST00000359785 SMYD5Q6GMV2 418 aa5.28□□□□□ -1.56
PTPN22-201ENST00000359785 BICD2Q8TD16 824 aa5.28□□□□□ -1.56
PTPN22-201ENST00000359785 CACTINQ8WUQ7 758 aaKnown RBP5.28□□□□□ -1.56
PTPN22-201ENST00000359785 PPP1R13BQ96KQ4 1090 aa5.28□□□□□ -1.56
PTPN22-201ENST00000359785 SLC12A5Q9H2X9 1139 aa5.28□□□□□ -1.56
PTPN22-201ENST00000359785 EMILIN1Q9Y6C2 1016 aa5.28□□□□□ -1.56
PTPN22-201ENST00000359785 KCPQ6ZWJ8 1503 aa5.28□□□□□ -1.56
PTPN22-201ENST00000359785 SOX12O15370 315 aa5.28□□□□□ -1.56
PTPN22-201ENST00000359785 FSBPO95073 299 aa5.28□□□□□ -1.56
PTPN22-201ENST00000359785 YEATS4O95619 227 aa5.28□□□□□ -1.56
PTPN22-201ENST00000359785 ACTN2P35609 894 aa5.28□□□□□ -1.56
PTPN22-201ENST00000359785 CLCN6P51797 869 aa5.28□□□□□ -1.56
PTPN22-201ENST00000359785 GRIPAP1Q4V328 841 aa5.28□□□□□ -1.56
PTPN22-201ENST00000359785 CCDC30Q5VVM6 783 aa5.28□□□□□ -1.56
PTPN22-201ENST00000359785 FAM71BQ8TC56 605 aa5.28□□□□□ -1.56
PTPN22-201ENST00000359785 CCDC51Q96ER9 411 aa5.28□□□□□ -1.56
PTPN22-201ENST00000359785 RPGRIP1Q96KN7 1286 aa5.28□□□□□ -1.56
PTPN22-201ENST00000359785 NEUROD6Q96NK8 337 aa5.28□□□□□ -1.56
PTPN22-201ENST00000359785 MOV10L1Q9BXT6 1211 aaKnown RBP5.28□□□□□ -1.56
PTPN22-201ENST00000359785 LRRCC1Q9C099 1032 aa5.28□□□□□ -1.56
PTPN22-201ENST00000359785 POLR3EQ9NVU0 708 aa5.28□□□□□ -1.56
PTPN22-201ENST00000359785 RTEL1Q9NZ71 1219 aa5.28□□□□□ -1.56
PTPN22-201ENST00000359785 NRAPQ86VF7 1730 aa5.28□□□□□ -1.56
PTPN22-201ENST00000359785 CCDC88AQ3V6T2 1871 aa5.28□□□□□ -1.56
PTPN22-201ENST00000359785 TNS2Q63HR2 1409 aa5.28□□□□□ -1.56
PTPN22-201ENST00000359785 ETF1P62495 437 aaKnown RBP5.28□□□□□ -1.56
PTPN22-201ENST00000359785 KRT85P78386 507 aa5.28□□□□□ -1.56
PTPN22-201ENST00000359785 KRT32Q14532 448 aa5.28□□□□□ -1.56
PTPN22-201ENST00000359785 COBLL1Q53SF7 1204 aa5.28□□□□□ -1.56
PTPN22-201ENST00000359785 ARHGEF25Q86VW2 580 aa5.28□□□□□ -1.56
PTPN22-201ENST00000359785 CD302Q8IX05 232 aa5.28□□□□□ -1.56
PTPN22-201ENST00000359785 TSR2Q969E8 191 aaKnown RBP5.28□□□□□ -1.56
PTPN22-201ENST00000359785 MYCBPQ99417 103 aaPredicted RBP5.28□□□□□ -1.56
PTPN22-201ENST00000359785 GZF1Q9H116 711 aaPredicted RBP5.28□□□□□ -1.56
PTPN22-201ENST00000359785 NUP62CLQ9H1M0 184 aa5.28□□□□□ -1.56
PTPN22-201ENST00000359785 GPR108Q9NPR9 543 aa5.28□□□□□ -1.56
PTPN22-201ENST00000359785 PALD1Q9ULE6 856 aa5.28□□□□□ -1.56
PTPN22-201ENST00000359785 AHDC1Q5TGY3 1603 aaPredicted RBP5.28□□□□□ -1.56
PTPN22-201ENST00000359785 PXDNQ92626 1479 aa5.28□□□□□ -1.56
PTPN22-201ENST00000359785 STK36Q9NRP7 1315 aa5.27□□□□□ -1.57
PTPN22-201ENST00000359785 GNAI2P04899 355 aa5.27□□□□□ -1.57
PTPN22-201ENST00000359785 ZNF18P17022 549 aa5.27□□□□□ -1.57
PTPN22-201ENST00000359785 RXRBP28702 533 aa5.27□□□□□ -1.57
PTPN22-201ENST00000359785 GBP6Q6ZN66 633 aa5.27□□□□□ -1.57
PTPN22-201ENST00000359785 HDGFL2Q7Z4V5 671 aaPredicted RBP5.27□□□□□ -1.57
PTPN22-201ENST00000359785 TTC6Q86TZ1 520 aa5.27□□□□□ -1.57
PTPN22-201ENST00000359785 CCAR1Q8IX12 1150 aaKnown RBP5.27□□□□□ -1.57
PTPN22-201ENST00000359785 FMR1NBQ8N0W7 255 aaPredicted RBP5.27□□□□□ -1.57
PTPN22-201ENST00000359785 TRIML1Q8N9V2 468 aa5.27□□□□□ -1.57
PTPN22-201ENST00000359785 PRPF38AQ8NAV1 312 aaKnown RBP5.27□□□□□ -1.57
PTPN22-201ENST00000359785 P3H4Q92791 437 aa5.27□□□□□ -1.57
PTPN22-201ENST00000359785 PANX2Q96RD6 677 aa5.27□□□□□ -1.57
PTPN22-201ENST00000359785 ARGLU1Q9NWB6 273 aaPredicted RBP5.27□□□□□ -1.57
PTPN22-201ENST00000359785 TNNT1P13805 278 aa5.27□□□□□ -1.57
PTPN22-201ENST00000359785 IRX3P78415 501 aaPredicted RBP5.27□□□□□ -1.57
PTPN22-201ENST00000359785 TEX35Q5T0J7 233 aa5.27□□□□□ -1.57
PTPN22-201ENST00000359785 ERC1Q8IUD2 1116 aa5.27□□□□□ -1.57
PTPN22-201ENST00000359785 LEO1Q8WVC0 666 aaPredicted RBP5.27□□□□□ -1.57
PTPN22-201ENST00000359785 PPM1EQ8WY54 764 aa5.27□□□□□ -1.57
PTPN22-201ENST00000359785 GTF3C6Q969F1 213 aa5.27□□□□□ -1.57
PTPN22-201ENST00000359785 HDAC5Q9UQL6 1122 aa5.27□□□□□ -1.57
PTPN22-201ENST00000359785 LRRC37AA6NMS7 1700 aa5.27□□□□□ -1.57
PTPN22-201ENST00000359785 A0A1B0GUL7 405 aa5.27□□□□□ -1.57
PTPN22-201ENST00000359785 PFKFB2O60825 505 aa5.27□□□□□ -1.57
PTPN22-201ENST00000359785 IGSF3O75054 1194 aa5.27□□□□□ -1.57
PTPN22-201ENST00000359785 ERCC3P19447 782 aa5.27□□□□□ -1.57
PTPN22-201ENST00000359785 CCNG1P51959 295 aa5.27□□□□□ -1.57
PTPN22-201ENST00000359785 EIF5P55010 431 aaKnown RBP5.27□□□□□ -1.57
PTPN22-201ENST00000359785 WASHC4Q2M389 1173 aa5.27□□□□□ -1.57
PTPN22-201ENST00000359785 MREGQ8N565 214 aa5.27□□□□□ -1.57
PTPN22-201ENST00000359785 CTCFLQ8NI51 663 aaPredicted RBP5.27□□□□□ -1.57
PTPN22-201ENST00000359785 PURBQ96QR8 312 aaKnown RBP5.27□□□□□ -1.57
PTPN22-201ENST00000359785 FANCGO15287 622 aa5.26□□□□□ -1.57
PTPN22-201ENST00000359785 STX10O60499 249 aa5.26□□□□□ -1.57
PTPN22-201ENST00000359785 HNRNPH2P55795 449 aaKnown RBP5.26□□□□□ -1.57
PTPN22-201ENST00000359785 CCDC144BQ3MJ40 725 aa5.26□□□□□ -1.57
PTPN22-201ENST00000359785 BEND6Q5SZJ8 279 aaPredicted RBP5.26□□□□□ -1.57
PTPN22-201ENST00000359785 CCDC144CPQ8IYA2 1237 aa5.26□□□□□ -1.57
PTPN22-201ENST00000359785 C8orf58Q8NAV2 365 aa5.26□□□□□ -1.57
PTPN22-201ENST00000359785 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.26□□□□□ -1.57
PTPN22-201ENST00000359785 PPP6R2O75170 966 aa5.26□□□□□ -1.57
PTPN22-201ENST00000359785 HMGB1P09429 215 aaKnown RBP5.26□□□□□ -1.57
PTPN22-201ENST00000359785 HCLS1P14317 486 aaPredicted RBP5.26□□□□□ -1.57
PTPN22-201ENST00000359785 MCM3P25205 808 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 159.6 ms