RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 OTUD7BQ6GQQ9 843 aa13.09□□□□□ -0.31
SSU72-202ENST00000359060 MTMR7Q9Y216 660 aa13.09□□□□□ -0.31
SSU72-202ENST00000359060 TYRO3Q06418 890 aa13.09□□□□□ -0.31
SSU72-202ENST00000359060 MAP3K12Q12852 859 aa13.09□□□□□ -0.31
SSU72-202ENST00000359060 TAF6LQ9Y6J9 622 aa13.09□□□□□ -0.31
SSU72-202ENST00000359060 SETD1AO15047 1707 aaKnown RBP13.09□□□□□ -0.31
SSU72-202ENST00000359060 PIK3C2AO00443 1686 aa13.08□□□□□ -0.32
SSU72-202ENST00000359060 SLC5A1P13866 664 aa13.08□□□□□ -0.32
SSU72-202ENST00000359060 LIG1P18858 919 aa13.08□□□□□ -0.32
SSU72-202ENST00000359060 NAT10Q9H0A0 1025 aaKnown RBP13.08□□□□□ -0.32
SSU72-202ENST00000359060 LUZP1Q86V48 1076 aa13.08□□□□□ -0.32
SSU72-202ENST00000359060 GTF3C6Q969F1 213 aa13.08□□□□□ -0.32
SSU72-202ENST00000359060 DNAJC25Q9H1X3 360 aa13.08□□□□□ -0.32
SSU72-202ENST00000359060 HSPD1P10809 573 aaKnown RBP13.08□□□□□ -0.32
SSU72-202ENST00000359060 LEO1Q8WVC0 666 aaPredicted RBP13.08□□□□□ -0.32
SSU72-202ENST00000359060 E7EWF7 191 aa13.07□□□□□ -0.32
SSU72-202ENST00000359060 SMC2O95347 1197 aa13.07□□□□□ -0.32
SSU72-202ENST00000359060 PI16Q6UXB8 463 aa13.07□□□□□ -0.32
SSU72-202ENST00000359060 FAM200AQ8TCP9 573 aa13.07□□□□□ -0.32
SSU72-202ENST00000359060 CARD10Q9BWT7 1032 aa13.07□□□□□ -0.32
SSU72-202ENST00000359060 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.07□□□□□ -0.32
SSU72-202ENST00000359060 H7C1W4 665 aa13.07□□□□□ -0.32
SSU72-202ENST00000359060 BIN1O00499 593 aa13.07□□□□□ -0.32
SSU72-202ENST00000359060 IFIT3O14879 490 aaKnown RBP13.07□□□□□ -0.32
SSU72-202ENST00000359060 ATP6V1AP38606 617 aa13.07□□□□□ -0.32
SSU72-202ENST00000359060 NOL7Q9UMY1 257 aaKnown RBP13.07□□□□□ -0.32
SSU72-202ENST00000359060 ZNF335Q9H4Z2 1342 aaPredicted RBP13.07□□□□□ -0.32
SSU72-202ENST00000359060 USP42Q9H9J4 1324 aaKnown RBP13.07□□□□□ -0.32
SSU72-202ENST00000359060 TPM3P06753 285 aa13.07□□□□□ -0.32
SSU72-202ENST00000359060 GPAA1O43292 621 aa13.06□□□□□ -0.32
SSU72-202ENST00000359060 CEP57L1Q8IYX8 460 aa13.06□□□□□ -0.32
SSU72-202ENST00000359060 SYNE4Q8N205 404 aa13.06□□□□□ -0.32
SSU72-202ENST00000359060 CDKL5O76039 1030 aa13.06□□□□□ -0.32
SSU72-202ENST00000359060 TTF1Q15361 905 aaPredicted RBP13.06□□□□□ -0.32
SSU72-202ENST00000359060 HS1BP3Q53T59 392 aa13.06□□□□□ -0.32
SSU72-202ENST00000359060 RASSF8Q8NHQ8 419 aa13.06□□□□□ -0.32
SSU72-202ENST00000359060 TMEM67Q5HYA8 995 aa13.06□□□□□ -0.32
SSU72-202ENST00000359060 TRIM22Q8IYM9 498 aa13.06□□□□□ -0.32
SSU72-202ENST00000359060 METAP2P50579 478 aaKnown RBP eCLIP13.06□□□□□ -0.32
SSU72-202ENST00000359060 ISM2Q6H9L7 571 aa13.06□□□□□ -0.32
SSU72-202ENST00000359060 GNL3LQ9NVN8 582 aaKnown RBP13.06□□□□□ -0.32
SSU72-202ENST00000359060 GOLGA8AA7E2F4 631 aa13.05□□□□□ -0.32
SSU72-202ENST00000359060 DDB1Q16531 1140 aa13.05□□□□□ -0.32
SSU72-202ENST00000359060 TPD52L1Q16890 204 aaPredicted RBP13.05□□□□□ -0.32
SSU72-202ENST00000359060 APPBP2Q92624 585 aa13.05□□□□□ -0.32
SSU72-202ENST00000359060 CCDC34Q96HJ3 373 aa13.05□□□□□ -0.32
SSU72-202ENST00000359060 UBAC1Q9BSL1 405 aa13.05□□□□□ -0.32
SSU72-202ENST00000359060 NIP7Q9Y221 180 aaKnown RBP eCLIP13.05□□□□□ -0.32
SSU72-202ENST00000359060 C17orf53Q8N3J3 647 aaPredicted RBP13.05□□□□□ -0.32
SSU72-202ENST00000359060 GREM2Q9H772 168 aa13.05□□□□□ -0.32
SSU72-202ENST00000359060 SCRN1Q12765 414 aa13.05□□□□□ -0.32
SSU72-202ENST00000359060 TOB2Q14106 344 aaPredicted RBP13.05□□□□□ -0.32
SSU72-202ENST00000359060 PIBF1Q8WXW3 757 aa13.05□□□□□ -0.32
SSU72-202ENST00000359060 PIGBQ92521 554 aa13.05□□□□□ -0.32
SSU72-202ENST00000359060 DSCC1Q9BVC3 393 aa13.05□□□□□ -0.32
SSU72-202ENST00000359060 TNS3Q68CZ2 1445 aa13.04□□□□□ -0.32
SSU72-202ENST00000359060 OFD1O75665 1012 aa13.04□□□□□ -0.32
SSU72-202ENST00000359060 JMYQ8N9B5 988 aa13.04□□□□□ -0.32
SSU72-202ENST00000359060 ZBTB1Q9Y2K1 713 aa13.04□□□□□ -0.32
SSU72-202ENST00000359060 SLC12A7Q9Y666 1083 aa13.04□□□□□ -0.32
SSU72-202ENST00000359060 MAST3O60307 1309 aa13.04□□□□□ -0.32
SSU72-202ENST00000359060 UQCRFS1P1P0C7P4 283 aa13.04□□□□□ -0.32
SSU72-202ENST00000359060 CDK11BP21127 795 aaKnown RBP13.04□□□□□ -0.32
SSU72-202ENST00000359060 MARCKSP29966 332 aaPredicted RBP13.03□□□□□ -0.32
SSU72-202ENST00000359060 IARSP41252 1262 aaKnown RBP13.03□□□□□ -0.32
SSU72-202ENST00000359060 ZMYM1Q5SVZ6 1142 aa13.03□□□□□ -0.32
SSU72-202ENST00000359060 MIGA1Q8NAN2 632 aa13.03□□□□□ -0.32
SSU72-202ENST00000359060 ZBTB38Q8NAP3 1195 aaPredicted RBP13.03□□□□□ -0.32
SSU72-202ENST00000359060 OSBP2Q969R2 916 aa13.03□□□□□ -0.32
SSU72-202ENST00000359060 ANO10Q9NW15 660 aa13.03□□□□□ -0.32
SSU72-202ENST00000359060 CLIP2Q9UDT6 1046 aa13.03□□□□□ -0.32
SSU72-202ENST00000359060 B4E1Z4 1266 aa13.03□□□□□ -0.32
SSU72-202ENST00000359060 PCCAP05165 728 aaPredicted RBP13.03□□□□□ -0.32
SSU72-202ENST00000359060 FOXO4P98177 505 aa13.03□□□□□ -0.32
SSU72-202ENST00000359060 MAGEB6Q8N7X4 407 aa13.03□□□□□ -0.32
SSU72-202ENST00000359060 MEGF6O75095 1541 aa13.03□□□□□ -0.32
SSU72-202ENST00000359060 FGAP02671 866 aa13.03□□□□□ -0.32
SSU72-202ENST00000359060 CCDC186Q7Z3E2 898 aa13.03□□□□□ -0.32
SSU72-202ENST00000359060 ERCC4Q92889 916 aaPredicted RBP13.03□□□□□ -0.32
SSU72-202ENST00000359060 ALG1Q9BT22 464 aa13.03□□□□□ -0.32
SSU72-202ENST00000359060 SLC26A6Q9BXS9 759 aa13.03□□□□□ -0.32
SSU72-202ENST00000359060 UTYO14607 1347 aa13.03□□□□□ -0.32
SSU72-202ENST00000359060 RPAP1Q9BWH6 1393 aaPredicted RBP13.03□□□□□ -0.32
SSU72-202ENST00000359060 RABL6Q3YEC7 729 aaPredicted RBP13.02□□□□□ -0.32
SSU72-202ENST00000359060 GPHNQ9NQX3 736 aaPredicted RBP13.02□□□□□ -0.32
SSU72-202ENST00000359060 ZBTB43O43298 467 aa13.02□□□□□ -0.32
SSU72-202ENST00000359060 NR1I2O75469 434 aa13.02□□□□□ -0.32
SSU72-202ENST00000359060 RFX5P48382 616 aaPredicted RBP13.02□□□□□ -0.32
SSU72-202ENST00000359060 NOLC1Q14978 699 aaKnown RBP eCLIP13.02□□□□□ -0.32
SSU72-202ENST00000359060 ZNF652Q9Y2D9 606 aa13.02□□□□□ -0.32
SSU72-202ENST00000359060 KDM6AO15550 1401 aaPredicted RBP13.02□□□□□ -0.33
SSU72-202ENST00000359060 A0A1B0GVL5 298 aa13.02□□□□□ -0.33
SSU72-202ENST00000359060 M0R2C6 588 aa13.02□□□□□ -0.33
SSU72-202ENST00000359060 OLFM4Q6UX06 510 aa13.02□□□□□ -0.33
SSU72-202ENST00000359060 GIGYF2Q6Y7W6 1299 aaKnown RBP13.02□□□□□ -0.33
SSU72-202ENST00000359060 FTOQ9C0B1 505 aaKnown RBP eCLIP13.02□□□□□ -0.33
SSU72-202ENST00000359060 CTAGE5O15320 804 aa13.02□□□□□ -0.33
SSU72-202ENST00000359060 PDE8AO60658 829 aa13.02□□□□□ -0.33
SSU72-202ENST00000359060 HLFQ16534 295 aa13.02□□□□□ -0.33
SSU72-202ENST00000359060 CCDC152Q4G0S7 254 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms