RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 ATP6V1AP38606 617 aa17.75■□□□□ 0.43
GABPB1-202ENST00000359031 CRKLP46109 303 aaKnown RBP17.75■□□□□ 0.43
GABPB1-202ENST00000359031 ATP2B3Q16720 1220 aa17.75■□□□□ 0.43
GABPB1-202ENST00000359031 ME3Q16798 604 aa17.75■□□□□ 0.43
GABPB1-202ENST00000359031 FOXD4L5Q5VV16 416 aaPredicted RBP17.75■□□□□ 0.43
GABPB1-202ENST00000359031 FOXD4L4Q8WXT5 416 aaPredicted RBP17.75■□□□□ 0.43
GABPB1-202ENST00000359031 CCDC85AQ96PX6 553 aaPredicted RBP17.75■□□□□ 0.43
GABPB1-202ENST00000359031 AKAP11Q9UKA4 1901 aa17.74■□□□□ 0.43
GABPB1-202ENST00000359031 ADORA1P30542 326 aa17.74■□□□□ 0.43
GABPB1-202ENST00000359031 ZNF445P59923 1031 aa17.74■□□□□ 0.43
GABPB1-202ENST00000359031 ST3GAL1Q11201 340 aa17.74■□□□□ 0.43
GABPB1-202ENST00000359031 LDHAL6AQ6ZMR3 332 aa17.74■□□□□ 0.43
GABPB1-202ENST00000359031 SYNE4Q8N205 404 aa17.74■□□□□ 0.43
GABPB1-202ENST00000359031 ACSBG1Q96GR2 724 aa17.74■□□□□ 0.43
GABPB1-202ENST00000359031 NEK1Q96PY6 1258 aa17.74■□□□□ 0.43
GABPB1-202ENST00000359031 LARP6Q9BRS8 491 aaKnown RBP17.74■□□□□ 0.43
GABPB1-202ENST00000359031 BCL11BQ9C0K0 894 aaPredicted RBP17.74■□□□□ 0.43
GABPB1-202ENST00000359031 TPCN1Q9ULQ1 816 aa17.74■□□□□ 0.43
GABPB1-202ENST00000359031 MAST3O60307 1309 aa17.74■□□□□ 0.43
GABPB1-202ENST00000359031 SYT1P21579 422 aa17.73■□□□□ 0.43
GABPB1-202ENST00000359031 GJB2P29033 226 aa17.73■□□□□ 0.43
GABPB1-202ENST00000359031 PARP10Q53GL7 1025 aa17.73■□□□□ 0.43
GABPB1-202ENST00000359031 ZNF512BQ96KM6 892 aaPredicted RBP17.73■□□□□ 0.43
GABPB1-202ENST00000359031 CNNM1Q9NRU3 951 aa17.73■□□□□ 0.43
GABPB1-202ENST00000359031 ATP6V1DQ9Y5K8 247 aa17.73■□□□□ 0.43
GABPB1-202ENST00000359031 TAF6LQ9Y6J9 622 aa17.73■□□□□ 0.43
GABPB1-202ENST00000359031 CHGBP05060 677 aa17.72■□□□□ 0.43
GABPB1-202ENST00000359031 CYP21A2P08686 494 aa17.72■□□□□ 0.43
GABPB1-202ENST00000359031 HMGB1P09429 215 aaKnown RBP17.72■□□□□ 0.43
GABPB1-202ENST00000359031 TOB2Q14106 344 aaPredicted RBP17.72■□□□□ 0.43
GABPB1-202ENST00000359031 VGLL2Q8N8G2 317 aa17.72■□□□□ 0.43
GABPB1-202ENST00000359031 TMEM87AQ8NBN3 555 aa17.72■□□□□ 0.43
GABPB1-202ENST00000359031 GPT2Q8TD30 523 aa17.72■□□□□ 0.43
GABPB1-202ENST00000359031 ANO8Q9HCE9 1232 aaPredicted RBP17.72■□□□□ 0.43
GABPB1-202ENST00000359031 SCN7AQ01118 1682 aa17.72■□□□□ 0.43
GABPB1-202ENST00000359031 HSP90B1P14625 803 aaKnown RBP17.72■□□□□ 0.43
GABPB1-202ENST00000359031 ITPK1Q13572 414 aa17.72■□□□□ 0.43
GABPB1-202ENST00000359031 CAVIN1Q6NZI2 390 aaKnown RBP17.72■□□□□ 0.43
GABPB1-202ENST00000359031 PLSCR1O15162 318 aa17.71■□□□□ 0.43
GABPB1-202ENST00000359031 CAMTA2O94983 1202 aa17.71■□□□□ 0.43
GABPB1-202ENST00000359031 F13A1P00488 732 aa17.71■□□□□ 0.43
GABPB1-202ENST00000359031 NCLP19338 710 aaKnown RBP17.71■□□□□ 0.43
GABPB1-202ENST00000359031 FKBP4Q02790 459 aaKnown RBP eCLIP17.71■□□□□ 0.43
GABPB1-202ENST00000359031 RTL9Q8NET4 1388 aa17.71■□□□□ 0.43
GABPB1-202ENST00000359031 MROH5Q6ZUA9 1318 aa17.7■□□□□ 0.42
GABPB1-202ENST00000359031 RGPD3A6NKT7 1758 aaPredicted RBP17.7■□□□□ 0.42
GABPB1-202ENST00000359031 RGPD4Q7Z3J3 1758 aa17.7■□□□□ 0.42
GABPB1-202ENST00000359031 ZBTB7AO95365 584 aa17.7■□□□□ 0.42
GABPB1-202ENST00000359031 ZSCAN23Q3MJ62 389 aa17.7■□□□□ 0.42
GABPB1-202ENST00000359031 GAS2L3Q86XJ1 694 aa17.7■□□□□ 0.42
GABPB1-202ENST00000359031 UTP14AQ9BVJ6 771 aaKnown RBP17.7■□□□□ 0.42
GABPB1-202ENST00000359031 TCHHQ07283 1943 aa17.7■□□□□ 0.42
GABPB1-202ENST00000359031 PDE8BO95263 885 aa17.69■□□□□ 0.42
GABPB1-202ENST00000359031 HSPD1P10809 573 aaKnown RBP17.69■□□□□ 0.42
GABPB1-202ENST00000359031 PDCP20941 246 aa17.69■□□□□ 0.42
GABPB1-202ENST00000359031 SUSD4Q5VX71 490 aa17.69■□□□□ 0.42
GABPB1-202ENST00000359031 NECAB1Q8N987 351 aa17.69■□□□□ 0.42
GABPB1-202ENST00000359031 CHAMP1Q96JM3 812 aa17.69■□□□□ 0.42
GABPB1-202ENST00000359031 NHSQ6T4R5 1651 aa17.69■□□□□ 0.42
GABPB1-202ENST00000359031 DOCK2Q92608 1830 aa17.69■□□□□ 0.42
GABPB1-202ENST00000359031 CASZ1Q86V15 1759 aa17.69■□□□□ 0.42
GABPB1-202ENST00000359031 M0R2C6 588 aa17.69■□□□□ 0.42
GABPB1-202ENST00000359031 APPBP2Q92624 585 aa17.69■□□□□ 0.42
GABPB1-202ENST00000359031 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.69■□□□□ 0.42
GABPB1-202ENST00000359031 MTMR6Q9Y217 621 aa17.69■□□□□ 0.42
GABPB1-202ENST00000359031 ZNF652Q9Y2D9 606 aa17.69■□□□□ 0.42
GABPB1-202ENST00000359031 ZAP70P43403 619 aa17.68■□□□□ 0.42
GABPB1-202ENST00000359031 COL9A3Q14050 684 aaPredicted RBP17.68■□□□□ 0.42
GABPB1-202ENST00000359031 SCARF1Q14162 830 aa17.68■□□□□ 0.42
GABPB1-202ENST00000359031 TTF1Q15361 905 aaPredicted RBP17.68■□□□□ 0.42
GABPB1-202ENST00000359031 PUM3Q15397 648 aaKnown RBP17.68■□□□□ 0.42
GABPB1-202ENST00000359031 CSPP1Q1MSJ5 1256 aa17.68■□□□□ 0.42
GABPB1-202ENST00000359031 ZSCAN25Q6NSZ9 544 aa17.68■□□□□ 0.42
GABPB1-202ENST00000359031 SYAP1Q96A49 352 aaPredicted RBP17.68■□□□□ 0.42
GABPB1-202ENST00000359031 TCEANC2Q96MN5 208 aa17.68■□□□□ 0.42
GABPB1-202ENST00000359031 CTNNA3Q9UI47 895 aa17.68■□□□□ 0.42
GABPB1-202ENST00000359031 RGL2O15211 777 aa17.67■□□□□ 0.42
GABPB1-202ENST00000359031 UQCRFS1P1P0C7P4 283 aa17.67■□□□□ 0.42
GABPB1-202ENST00000359031 ARID4AP29374 1257 aaPredicted RBP17.67■□□□□ 0.42
GABPB1-202ENST00000359031 STOX1Q6ZVD7 989 aa17.67■□□□□ 0.42
GABPB1-202ENST00000359031 GTF3C6Q969F1 213 aa17.67■□□□□ 0.42
GABPB1-202ENST00000359031 OSBP2Q969R2 916 aa17.67■□□□□ 0.42
GABPB1-202ENST00000359031 STK32BQ9NY57 414 aa17.67■□□□□ 0.42
GABPB1-202ENST00000359031 A0A1B0GUL6 1792 aa17.67■□□□□ 0.42
GABPB1-202ENST00000359031 NTSR2O95665 410 aa17.66■□□□□ 0.42
GABPB1-202ENST00000359031 MCAMP43121 646 aa17.66■□□□□ 0.42
GABPB1-202ENST00000359031 SLFNL1Q499Z3 407 aa17.66■□□□□ 0.42
GABPB1-202ENST00000359031 Q6ZUG5 572 aa17.66■□□□□ 0.42
GABPB1-202ENST00000359031 DHX32Q7L7V1 743 aaKnown RBP17.66■□□□□ 0.42
GABPB1-202ENST00000359031 LPIN2Q92539 896 aa17.66■□□□□ 0.42
GABPB1-202ENST00000359031 PANK2Q9BZ23 570 aa17.66■□□□□ 0.42
GABPB1-202ENST00000359031 PDGFDQ9GZP0 370 aaPredicted RBP17.66■□□□□ 0.42
GABPB1-202ENST00000359031 ATF5Q9Y2D1 282 aaPredicted RBP17.66■□□□□ 0.42
GABPB1-202ENST00000359031 BTAF1O14981 1849 aa17.66■□□□□ 0.42
GABPB1-202ENST00000359031 FGFR2P21802 821 aa17.65■□□□□ 0.42
GABPB1-202ENST00000359031 WASHC4Q2M389 1173 aa17.65■□□□□ 0.42
GABPB1-202ENST00000359031 CCDC152Q4G0S7 254 aa17.65■□□□□ 0.42
GABPB1-202ENST00000359031 PTF1AQ7RTS3 328 aa17.65■□□□□ 0.42
GABPB1-202ENST00000359031 SLC5A1P13866 664 aa17.65■□□□□ 0.42
GABPB1-202ENST00000359031 USP48Q86UV5 1035 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms