RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 HAUS4Q9H6D7 363 aa4.68□□□□□ -1.66
SYNE2-204ENST00000358025 WDR19Q8NEZ3 1342 aa4.68□□□□□ -1.66
SYNE2-204ENST00000358025 NLRP12P59046 1061 aa4.68□□□□□ -1.66
SYNE2-204ENST00000358025 C10orf76Q5T2E6 689 aa4.68□□□□□ -1.66
SYNE2-204ENST00000358025 NGDNQ8NEJ9 315 aaKnown RBP4.68□□□□□ -1.66
SYNE2-204ENST00000358025 KIAA1468Q9P260 1216 aa4.68□□□□□ -1.66
SYNE2-204ENST00000358025 SYNMO15061 1565 aa4.68□□□□□ -1.66
SYNE2-204ENST00000358025 SPTLC2O15270 562 aa4.68□□□□□ -1.66
SYNE2-204ENST00000358025 PNMA6AP0CW24 399 aaPredicted RBP4.68□□□□□ -1.66
SYNE2-204ENST00000358025 INPP5BP32019 993 aa4.68□□□□□ -1.66
SYNE2-204ENST00000358025 KDM5CP41229 1560 aa4.68□□□□□ -1.66
SYNE2-204ENST00000358025 L2HGDHQ9H9P8 463 aa4.68□□□□□ -1.66
SYNE2-204ENST00000358025 RCAN1P53805 252 aa4.68□□□□□ -1.66
SYNE2-204ENST00000358025 ORC3Q9UBD5 711 aaPredicted RBP4.68□□□□□ -1.66
SYNE2-204ENST00000358025 RGS12O14924 1447 aa4.68□□□□□ -1.66
SYNE2-204ENST00000358025 CCDC26Q8TAB7 109 aa4.68□□□□□ -1.66
SYNE2-204ENST00000358025 PDILTQ8N807 584 aa4.68□□□□□ -1.66
SYNE2-204ENST00000358025 SRRM3A6NNA2 597 aaPredicted RBP4.68□□□□□ -1.66
SYNE2-204ENST00000358025 ELL2O00472 640 aaPredicted RBP4.68□□□□□ -1.66
SYNE2-204ENST00000358025 CDC23Q9UJX2 597 aa4.68□□□□□ -1.66
SYNE2-204ENST00000358025 TMEM87BQ96K49 555 aa4.67□□□□□ -1.66
SYNE2-204ENST00000358025 ACTR5Q9H9F9 607 aaPredicted RBP4.67□□□□□ -1.66
SYNE2-204ENST00000358025 NUP153P49790 1475 aaKnown RBP4.67□□□□□ -1.66
SYNE2-204ENST00000358025 TARSL2A2RTX5 802 aaKnown RBP4.67□□□□□ -1.66
SYNE2-204ENST00000358025 GOLGA8KD6RF30 607 aa4.67□□□□□ -1.66
SYNE2-204ENST00000358025 FLIIQ13045 1269 aa4.67□□□□□ -1.66
SYNE2-204ENST00000358025 HDAC9Q9UKV0 1011 aa4.67□□□□□ -1.66
SYNE2-204ENST00000358025 CAMK4Q16566 473 aa4.67□□□□□ -1.66
SYNE2-204ENST00000358025 KIAA0753Q2KHM9 967 aa4.67□□□□□ -1.66
SYNE2-204ENST00000358025 ZNF579Q8NAF0 562 aaKnown RBP4.67□□□□□ -1.66
SYNE2-204ENST00000358025 TRIM58Q8NG06 486 aa4.67□□□□□ -1.66
SYNE2-204ENST00000358025 PPFIA4O75335 1185 aa4.67□□□□□ -1.66
SYNE2-204ENST00000358025 HELLSQ9NRZ9 838 aa4.67□□□□□ -1.66
SYNE2-204ENST00000358025 PARP2Q9UGN5 583 aa4.67□□□□□ -1.66
SYNE2-204ENST00000358025 PTPRTO14522 1441 aa4.67□□□□□ -1.66
SYNE2-204ENST00000358025 PSMA7O14818 248 aa4.67□□□□□ -1.66
SYNE2-204ENST00000358025 TCP1P17987 556 aaKnown RBP4.67□□□□□ -1.66
SYNE2-204ENST00000358025 RPS6KB1P23443 525 aa4.67□□□□□ -1.66
SYNE2-204ENST00000358025 SRGAP1Q7Z6B7 1085 aa4.67□□□□□ -1.66
SYNE2-204ENST00000358025 LRRC45Q96CN5 670 aa4.67□□□□□ -1.66
SYNE2-204ENST00000358025 ATG3Q9NT62 314 aa4.67□□□□□ -1.66
SYNE2-204ENST00000358025 PRDM15P57071 1507 aaPredicted RBP4.67□□□□□ -1.66
SYNE2-204ENST00000358025 IQUBQ8NA54 791 aa4.67□□□□□ -1.66
SYNE2-204ENST00000358025 USP16Q9Y5T5 823 aa4.67□□□□□ -1.66
SYNE2-204ENST00000358025 LINS1Q8NG48 757 aa4.67□□□□□ -1.66
SYNE2-204ENST00000358025 TEX13AQ9BXU3 409 aaPredicted RBP4.67□□□□□ -1.66
SYNE2-204ENST00000358025 A2MP01023 1474 aa4.67□□□□□ -1.66
SYNE2-204ENST00000358025 EIF4G3O43432 1585 aaKnown RBP4.67□□□□□ -1.66
SYNE2-204ENST00000358025 KRT23Q9C075 422 aa4.67□□□□□ -1.66
SYNE2-204ENST00000358025 NSRP1Q9H0G5 558 aaKnown RBP4.67□□□□□ -1.66
SYNE2-204ENST00000358025 RIMS2Q9UQ26 1411 aa4.67□□□□□ -1.66
SYNE2-204ENST00000358025 EVCP57679 992 aa4.67□□□□□ -1.66
SYNE2-204ENST00000358025 GSDMAQ96QA5 445 aa4.67□□□□□ -1.66
SYNE2-204ENST00000358025 POLR3EQ9NVU0 708 aa4.67□□□□□ -1.66
SYNE2-204ENST00000358025 N4BP3O15049 544 aa4.67□□□□□ -1.66
SYNE2-204ENST00000358025 TMC6Q7Z403 805 aa4.67□□□□□ -1.66
SYNE2-204ENST00000358025 LARSQ9P2J5 1176 aaKnown RBP4.67□□□□□ -1.66
SYNE2-204ENST00000358025 SEPT2Q15019 361 aa4.67□□□□□ -1.66
SYNE2-204ENST00000358025 RBM33Q96EV2 1170 aaKnown RBP4.67□□□□□ -1.66
SYNE2-204ENST00000358025 GGNBP2Q9H3C7 697 aa4.67□□□□□ -1.66
SYNE2-204ENST00000358025 NBPF10Q6P3W6 841 aaKnown RBP4.67□□□□□ -1.66
SYNE2-204ENST00000358025 CCHCR1Q8TD31 782 aa4.67□□□□□ -1.66
SYNE2-204ENST00000358025 ZNF202O95125 648 aa4.67□□□□□ -1.66
SYNE2-204ENST00000358025 LUC7L2Q9Y383 392 aaKnown RBP4.67□□□□□ -1.66
SYNE2-204ENST00000358025 EVI5O60447 810 aa4.67□□□□□ -1.66
SYNE2-204ENST00000358025 TRAPPC10P48553 1259 aa4.67□□□□□ -1.66
SYNE2-204ENST00000358025 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.67□□□□□ -1.66
SYNE2-204ENST00000358025 DNM1Q05193 864 aaKnown RBP4.67□□□□□ -1.66
SYNE2-204ENST00000358025 CCDC12Q8WUD4 166 aaPredicted RBP4.67□□□□□ -1.66
SYNE2-204ENST00000358025 KIF2CQ99661 725 aa4.67□□□□□ -1.66
SYNE2-204ENST00000358025 ZNF853P0CG23 659 aa4.67□□□□□ -1.66
SYNE2-204ENST00000358025 OR8K1Q8NGG5 319 aa4.67□□□□□ -1.66
SYNE2-204ENST00000358025 PNPLA6Q8IY17 1366 aa4.67□□□□□ -1.66
SYNE2-204ENST00000358025 BIRC3Q13489 604 aa4.66□□□□□ -1.66
SYNE2-204ENST00000358025 SAMD1Q6SPF0 538 aaPredicted RBP4.66□□□□□ -1.66
SYNE2-204ENST00000358025 EDC4Q6P2E9 1401 aaKnown RBP4.66□□□□□ -1.66
SYNE2-204ENST00000358025 IRX1P78414 480 aaPredicted RBP4.66□□□□□ -1.66
SYNE2-204ENST00000358025 CCDC40Q4G0X9 1142 aa4.66□□□□□ -1.66
SYNE2-204ENST00000358025 NOS1P29475 1434 aa4.66□□□□□ -1.66
SYNE2-204ENST00000358025 GNA14O95837 355 aa4.66□□□□□ -1.66
SYNE2-204ENST00000358025 TRIM37O94972 964 aa4.66□□□□□ -1.66
SYNE2-204ENST00000358025 EIF3BP55884 814 aaKnown RBP4.66□□□□□ -1.66
SYNE2-204ENST00000358025 RIC3Q7Z5B4 369 aa4.66□□□□□ -1.66
SYNE2-204ENST00000358025 PLCB1Q9NQ66 1216 aa4.66□□□□□ -1.66
SYNE2-204ENST00000358025 TRMT1Q9NXH9 659 aaKnown RBP4.66□□□□□ -1.66
SYNE2-204ENST00000358025 RASAL2Q9UJF2 1139 aa4.66□□□□□ -1.66
SYNE2-204ENST00000358025 RBM8AQ9Y5S9 174 aaKnown RBP4.66□□□□□ -1.66
SYNE2-204ENST00000358025 UNC13AQ9UPW8 1703 aa4.66□□□□□ -1.66
SYNE2-204ENST00000358025 H7C1D1 291 aa4.66□□□□□ -1.66
SYNE2-204ENST00000358025 NFXL1Q6ZNB6 911 aa4.66□□□□□ -1.66
SYNE2-204ENST00000358025 PPP1R42Q7Z4L9 355 aa4.66□□□□□ -1.66
SYNE2-204ENST00000358025 ATP11AP98196 1134 aa4.66□□□□□ -1.66
SYNE2-204ENST00000358025 FOXD4L6Q3SYB3 417 aaPredicted RBP4.66□□□□□ -1.66
SYNE2-204ENST00000358025 FOXD4L3Q6VB84 417 aaPredicted RBP4.66□□□□□ -1.66
SYNE2-204ENST00000358025 FNBP4Q8N3X1 1017 aaPredicted RBP4.66□□□□□ -1.66
SYNE2-204ENST00000358025 NAPGQ99747 312 aaPredicted RBP4.66□□□□□ -1.66
SYNE2-204ENST00000358025 WWC3Q9ULE0 1092 aa4.66□□□□□ -1.66
SYNE2-204ENST00000358025 MYOM2P54296 1465 aa4.66□□□□□ -1.66
SYNE2-204ENST00000358025 MTMR3Q13615 1198 aa4.66□□□□□ -1.66
SYNE2-204ENST00000358025 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms