RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 MIS18AQ9NYP9 233 aa12.47□□□□□ -0.41
CAPN3-205ENST00000357568 MYH15Q9Y2K3 1946 aa12.47□□□□□ -0.41
CAPN3-205ENST00000357568 SCN11AQ9UI33 1791 aa12.47□□□□□ -0.41
CAPN3-205ENST00000357568 CCP110O43303 1012 aa12.47□□□□□ -0.41
CAPN3-205ENST00000357568 CYP2C19P33261 490 aa12.47□□□□□ -0.41
CAPN3-205ENST00000357568 CCDC150Q8NCX0 1101 aa12.47□□□□□ -0.41
CAPN3-205ENST00000357568 PGBD1Q96JS3 809 aa12.47□□□□□ -0.41
CAPN3-205ENST00000357568 RFX7Q2KHR2 1363 aa12.47□□□□□ -0.41
CAPN3-205ENST00000357568 A0A0G2JS52 829 aa12.46□□□□□ -0.41
CAPN3-205ENST00000357568 CCDC69A6NI79 296 aa12.46□□□□□ -0.41
CAPN3-205ENST00000357568 SLC27A2O14975 620 aa12.46□□□□□ -0.41
CAPN3-205ENST00000357568 NR1I2O75469 434 aa12.46□□□□□ -0.41
CAPN3-205ENST00000357568 CPA1P15085 419 aa12.46□□□□□ -0.41
CAPN3-205ENST00000357568 PHKG2P15735 406 aa12.46□□□□□ -0.41
CAPN3-205ENST00000357568 TAF7Q15545 349 aaPredicted RBP12.46□□□□□ -0.41
CAPN3-205ENST00000357568 ZNF530Q6P9A1 599 aaPredicted RBP12.46□□□□□ -0.41
CAPN3-205ENST00000357568 KRT27Q7Z3Y8 459 aa12.46□□□□□ -0.41
CAPN3-205ENST00000357568 BICD2Q8TD16 824 aa12.46□□□□□ -0.41
CAPN3-205ENST00000357568 ADCY9O60503 1353 aa12.46□□□□□ -0.41
CAPN3-205ENST00000357568 MED23Q9ULK4 1368 aa12.46□□□□□ -0.41
CAPN3-205ENST00000357568 MAP4K4O95819 1239 aaPredicted RBP12.46□□□□□ -0.41
CAPN3-205ENST00000357568 CCDC93Q567U6 631 aa12.46□□□□□ -0.41
CAPN3-205ENST00000357568 C1orf141Q5JVX7 400 aa12.46□□□□□ -0.41
CAPN3-205ENST00000357568 BPIFA3Q9BQP9 254 aa12.46□□□□□ -0.41
CAPN3-205ENST00000357568 LLPHQ9BRT6 129 aaKnown RBP12.46□□□□□ -0.41
CAPN3-205ENST00000357568 NECAB1Q8N987 351 aa12.45□□□□□ -0.42
CAPN3-205ENST00000357568 SRRTQ9BXP5 876 aaKnown RBP12.45□□□□□ -0.42
CAPN3-205ENST00000357568 NAT10Q9H0A0 1025 aaKnown RBP12.45□□□□□ -0.42
CAPN3-205ENST00000357568 MRC1P22897 1456 aa12.45□□□□□ -0.42
CAPN3-205ENST00000357568 CYP27B1O15528 508 aa12.45□□□□□ -0.42
CAPN3-205ENST00000357568 IGSF3O75054 1194 aa12.45□□□□□ -0.42
CAPN3-205ENST00000357568 TPM1P09493 284 aa12.45□□□□□ -0.42
CAPN3-205ENST00000357568 IRX5P78411 483 aaPredicted RBP12.45□□□□□ -0.42
CAPN3-205ENST00000357568 NAA30Q147X3 362 aaPredicted RBP12.45□□□□□ -0.42
CAPN3-205ENST00000357568 BEND3Q5T5X7 828 aa12.45□□□□□ -0.42
CAPN3-205ENST00000357568 NAA16Q6N069 864 aaPredicted RBP12.45□□□□□ -0.42
CAPN3-205ENST00000357568 MARCH10Q8NA82 808 aaPredicted RBP12.45□□□□□ -0.42
CAPN3-205ENST00000357568 LARP6Q9BRS8 491 aaKnown RBP12.45□□□□□ -0.42
CAPN3-205ENST00000357568 RCOR1Q9UKL0 485 aa12.45□□□□□ -0.42
CAPN3-205ENST00000357568 KDM3BQ7LBC6 1761 aa12.45□□□□□ -0.42
CAPN3-205ENST00000357568 NRDCO43847 1150 aa12.45□□□□□ -0.42
CAPN3-205ENST00000357568 CDK11BP21127 795 aaKnown RBP12.45□□□□□ -0.42
CAPN3-205ENST00000357568 ELF2Q15723 593 aa12.45□□□□□ -0.42
CAPN3-205ENST00000357568 FILIP1Q7Z7B0 1213 aa12.45□□□□□ -0.42
CAPN3-205ENST00000357568 NOL10Q9BSC4 688 aaKnown RBP12.45□□□□□ -0.42
CAPN3-205ENST00000357568 SBF2Q86WG5 1849 aa12.44□□□□□ -0.42
CAPN3-205ENST00000357568 NHSQ6T4R5 1651 aa12.44□□□□□ -0.42
CAPN3-205ENST00000357568 ALDH1L1O75891 902 aa12.44□□□□□ -0.42
CAPN3-205ENST00000357568 TOB2Q14106 344 aaPredicted RBP12.44□□□□□ -0.42
CAPN3-205ENST00000357568 USPL1Q5W0Q7 1092 aa12.44□□□□□ -0.42
CAPN3-205ENST00000357568 CEP57L1Q8IYX8 460 aa12.44□□□□□ -0.42
CAPN3-205ENST00000357568 GTF3C6Q969F1 213 aa12.44□□□□□ -0.42
CAPN3-205ENST00000357568 CHMP4CQ96CF2 233 aa12.44□□□□□ -0.42
CAPN3-205ENST00000357568 ZFP91Q96JP5 570 aaPredicted RBP12.44□□□□□ -0.42
CAPN3-205ENST00000357568 ARGLU1Q9NWB6 273 aaPredicted RBP12.44□□□□□ -0.42
CAPN3-205ENST00000357568 KCNJ4P48050 445 aa12.44□□□□□ -0.42
CAPN3-205ENST00000357568 HDGFL1Q5TGJ6 251 aa12.44□□□□□ -0.42
CAPN3-205ENST00000357568 FERMT3Q86UX7 667 aa12.44□□□□□ -0.42
CAPN3-205ENST00000357568 DHX37Q8IY37 1157 aaKnown RBP12.44□□□□□ -0.42
CAPN3-205ENST00000357568 ZNF592Q92610 1267 aa12.44□□□□□ -0.42
CAPN3-205ENST00000357568 DCAF5Q96JK2 942 aa12.44□□□□□ -0.42
CAPN3-205ENST00000357568 PHLPP2Q6ZVD8 1323 aa12.43□□□□□ -0.42
CAPN3-205ENST00000357568 DOT1LQ8TEK3 1739 aa12.43□□□□□ -0.42
CAPN3-205ENST00000357568 TOGARAM1Q9Y4F4 1720 aa12.43□□□□□ -0.42
CAPN3-205ENST00000357568 USP27XA6NNY8 438 aa12.43□□□□□ -0.42
CAPN3-205ENST00000357568 BECN2A8MW95 431 aa12.43□□□□□ -0.42
CAPN3-205ENST00000357568 SNW1Q13573 536 aaKnown RBP12.43□□□□□ -0.42
CAPN3-205ENST00000357568 MUM1L1Q5H9M0 696 aa12.43□□□□□ -0.42
CAPN3-205ENST00000357568 FAM196AQ6ZSG2 479 aa12.43□□□□□ -0.42
CAPN3-205ENST00000357568 DHX40Q8IX18 779 aaKnown RBP12.43□□□□□ -0.42
CAPN3-205ENST00000357568 DDX54Q8TDD1 881 aaKnown RBP12.43□□□□□ -0.42
CAPN3-205ENST00000357568 DNAAF4Q8WXU2 420 aa12.43□□□□□ -0.42
CAPN3-205ENST00000357568 ZNF446Q9NWS9 450 aa12.43□□□□□ -0.42
CAPN3-205ENST00000357568 IFIT2P09913 472 aaKnown RBP12.43□□□□□ -0.42
CAPN3-205ENST00000357568 TPM4P67936 248 aa12.43□□□□□ -0.42
CAPN3-205ENST00000357568 TEX35Q5T0J7 233 aa12.43□□□□□ -0.42
CAPN3-205ENST00000357568 TICAM2Q86XR7 235 aa12.43□□□□□ -0.42
CAPN3-205ENST00000357568 SMARCC2Q8TAQ2 1214 aa12.43□□□□□ -0.42
CAPN3-205ENST00000357568 CEMIPQ8WUJ3 1361 aa12.42□□□□□ -0.42
CAPN3-205ENST00000357568 SIPA1L3O60292 1781 aaPredicted RBP12.42□□□□□ -0.42
CAPN3-205ENST00000357568 C11orf57Q6ZUT1 292 aaPredicted RBP12.42□□□□□ -0.42
CAPN3-205ENST00000357568 FHOD1Q9Y613 1164 aa12.42□□□□□ -0.42
CAPN3-205ENST00000357568 KDM6AO15550 1401 aaPredicted RBP12.42□□□□□ -0.42
CAPN3-205ENST00000357568 ITGB4P16144 1822 aa12.42□□□□□ -0.42
CAPN3-205ENST00000357568 ERVV-2B6SEH9 535 aa12.42□□□□□ -0.42
CAPN3-205ENST00000357568 ZRANB2O95218 330 aaKnown RBP eCLIP12.42□□□□□ -0.42
CAPN3-205ENST00000357568 FAM160A1Q05DH4 1040 aa12.42□□□□□ -0.42
CAPN3-205ENST00000357568 CCDC73Q6ZRK6 1079 aa12.42□□□□□ -0.42
CAPN3-205ENST00000357568 TXLNBQ8N3L3 684 aa12.42□□□□□ -0.42
CAPN3-205ENST00000357568 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.42□□□□□ -0.42
CAPN3-205ENST00000357568 TFIP11Q9UBB9 837 aaKnown RBP12.42□□□□□ -0.42
CAPN3-205ENST00000357568 CHMP3Q9Y3E7 222 aa12.42□□□□□ -0.42
CAPN3-205ENST00000357568 NMIQ13287 307 aaPredicted RBP12.41□□□□□ -0.42
CAPN3-205ENST00000357568 OS9Q13438 667 aaPredicted RBP12.41□□□□□ -0.42
CAPN3-205ENST00000357568 ENGASEQ8NFI3 743 aa12.41□□□□□ -0.42
CAPN3-205ENST00000357568 ZNF396Q96N95 335 aaPredicted RBP12.41□□□□□ -0.42
CAPN3-205ENST00000357568 UBXN6Q9BZV1 441 aa12.41□□□□□ -0.42
CAPN3-205ENST00000357568 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.41□□□□□ -0.42
CAPN3-205ENST00000357568 V9GYY5 206 aaPredicted RBP12.41□□□□□ -0.42
CAPN3-205ENST00000357568 RNMTO43148 476 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms