RNA–Protein interactions for RNA: ENST00000357482.5

USP6-202, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 1 (best)

Gene USP6, Length 1,947 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-202ENST00000357482 ZNF526Q8TF50 670 aaPredicted RBP17.31■□□□□ 0.36
USP6-202ENST00000357482 AFDNP55196 1824 aaKnown RBP17.3■□□□□ 0.36
USP6-202ENST00000357482 CCDC196A0A1B0GTZ2 297 aa17.3■□□□□ 0.36
USP6-202ENST00000357482 KDM4AO75164 1064 aa17.3■□□□□ 0.36
USP6-202ENST00000357482 KMT5BQ4FZB7 885 aa17.3■□□□□ 0.36
USP6-202ENST00000357482 C10orf67Q8IYJ2 551 aa17.3■□□□□ 0.36
USP6-202ENST00000357482 ERO1AQ96HE7 468 aa17.3■□□□□ 0.36
USP6-202ENST00000357482 CEP89Q96ST8 783 aa17.3■□□□□ 0.36
USP6-202ENST00000357482 ZNF446Q9NWS9 450 aa17.3■□□□□ 0.36
USP6-202ENST00000357482 PPP1R12AO14974 1030 aaPredicted RBP17.29■□□□□ 0.36
USP6-202ENST00000357482 ATP8B1O43520 1251 aa17.29■□□□□ 0.36
USP6-202ENST00000357482 GIGYF1O75420 1035 aaPredicted RBP17.29■□□□□ 0.36
USP6-202ENST00000357482 CAMTA2O94983 1202 aa17.29■□□□□ 0.36
USP6-202ENST00000357482 MAGEA9P43362 315 aa17.29■□□□□ 0.36
USP6-202ENST00000357482 SETQ01105 290 aaPredicted RBP17.29■□□□□ 0.36
USP6-202ENST00000357482 NBPF11Q86T75 865 aa17.29■□□□□ 0.36
USP6-202ENST00000357482 SRLQ86TD4 932 aa17.29■□□□□ 0.36
USP6-202ENST00000357482 GOLGA5Q8TBA6 731 aa17.29■□□□□ 0.36
USP6-202ENST00000357482 SETDB2Q96T68 719 aa17.29■□□□□ 0.36
USP6-202ENST00000357482 TACO1Q9BSH4 297 aaKnown RBP17.29■□□□□ 0.36
USP6-202ENST00000357482 CARMIL3Q8ND23 1372 aa17.29■□□□□ 0.36
USP6-202ENST00000357482 NBPF9Q3BBW0 867 aa17.29■□□□□ 0.36
USP6-202ENST00000357482 C17orf53Q8N3J3 647 aaPredicted RBP17.29■□□□□ 0.36
USP6-202ENST00000357482 TSPYL4Q9UJ04 414 aa17.29■□□□□ 0.36
USP6-202ENST00000357482 SUFUQ9UMX1 484 aa17.29■□□□□ 0.36
USP6-202ENST00000357482 TSR2Q969E8 191 aaKnown RBP17.28■□□□□ 0.36
USP6-202ENST00000357482 ZNF652Q9Y2D9 606 aa17.28■□□□□ 0.36
USP6-202ENST00000357482 KDM3BQ7LBC6 1761 aa17.28■□□□□ 0.36
USP6-202ENST00000357482 EIF4A1P60842 406 aaKnown RBP17.27■□□□□ 0.36
USP6-202ENST00000357482 KRBA2Q6ZNG9 492 aa17.27■□□□□ 0.36
USP6-202ENST00000357482 EP400NLQ6ZTU2 488 aa17.27■□□□□ 0.36
USP6-202ENST00000357482 C2CD5Q86YS7 1000 aa17.27■□□□□ 0.36
USP6-202ENST00000357482 CCDC24Q8N4L8 307 aa17.27■□□□□ 0.36
USP6-202ENST00000357482 FBXO18Q8NFZ0 1043 aa17.27■□□□□ 0.36
USP6-202ENST00000357482 GPBP1L1Q9HC44 474 aaPredicted RBP17.27■□□□□ 0.36
USP6-202ENST00000357482 FOXD4L1Q9NU39 408 aa17.27■□□□□ 0.36
USP6-202ENST00000357482 PSD3Q9NYI0 1048 aa17.27■□□□□ 0.36
USP6-202ENST00000357482 BRCA1P38398 1863 aaKnown RBP17.27■□□□□ 0.36
USP6-202ENST00000357482 NRXN2Q9P2S2 1712 aa17.27■□□□□ 0.36
USP6-202ENST00000357482 NBPF26B4DH59 902 aa17.27■□□□□ 0.35
USP6-202ENST00000357482 BMP2KLQ5H9B9 411 aa17.27■□□□□ 0.35
USP6-202ENST00000357482 NBPF10Q6P3W6 841 aaKnown RBP17.27■□□□□ 0.35
USP6-202ENST00000357482 NBPF15Q8N660 670 aa17.27■□□□□ 0.35
USP6-202ENST00000357482 LAMB4A4D0S4 1761 aa17.26■□□□□ 0.35
USP6-202ENST00000357482 H0YIN7 160 aa17.26■□□□□ 0.35
USP6-202ENST00000357482 ZSCAN26Q16670 478 aa17.26■□□□□ 0.35
USP6-202ENST00000357482 FAM43BQ6ZT52 329 aaPredicted RBP17.26■□□□□ 0.35
USP6-202ENST00000357482 CNBD1Q8NA66 436 aa17.26■□□□□ 0.35
USP6-202ENST00000357482 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.26■□□□□ 0.35
USP6-202ENST00000357482 TTC36A6NLP5 189 aa17.25■□□□□ 0.35
USP6-202ENST00000357482 IVLP07476 585 aa17.25■□□□□ 0.35
USP6-202ENST00000357482 MCTP2Q6DN12 878 aa17.25■□□□□ 0.35
USP6-202ENST00000357482 CCDC191Q8NCU4 936 aa17.25■□□□□ 0.35
USP6-202ENST00000357482 PYCARDQ9ULZ3 195 aa17.25■□□□□ 0.35
USP6-202ENST00000357482 BCORQ6W2J9 1755 aa17.25■□□□□ 0.35
USP6-202ENST00000357482 TNNT1P13805 278 aa17.25■□□□□ 0.35
USP6-202ENST00000357482 ST5P78524 1137 aa17.25■□□□□ 0.35
USP6-202ENST00000357482 ZKSCAN8Q15776 578 aaPredicted RBP17.25■□□□□ 0.35
USP6-202ENST00000357482 PRR5LQ6MZQ0 368 aa17.25■□□□□ 0.35
USP6-202ENST00000357482 RRP15Q9Y3B9 282 aaKnown RBP17.25■□□□□ 0.35
USP6-202ENST00000357482 ADCY9O60503 1353 aa17.25■□□□□ 0.35
USP6-202ENST00000357482 PDE6BP35913 854 aa17.24■□□□□ 0.35
USP6-202ENST00000357482 PPM1EQ8WY54 764 aa17.24■□□□□ 0.35
USP6-202ENST00000357482 TMX1Q9H3N1 280 aa17.24■□□□□ 0.35
USP6-202ENST00000357482 ARFGEF1Q9Y6D6 1849 aa17.24■□□□□ 0.35
USP6-202ENST00000357482 CD2BP2O95400 341 aaKnown RBP17.23■□□□□ 0.35
USP6-202ENST00000357482 MYL6BP14649 208 aa17.23■□□□□ 0.35
USP6-202ENST00000357482 RARSP54136 660 aaKnown RBP17.23■□□□□ 0.35
USP6-202ENST00000357482 C1QTNF8P60827 252 aa17.23■□□□□ 0.35
USP6-202ENST00000357482 EXOSC9Q06265 439 aaKnown RBP17.23■□□□□ 0.35
USP6-202ENST00000357482 LRCH2Q5VUJ6 765 aa17.23■□□□□ 0.35
USP6-202ENST00000357482 CLEC4GQ6UXB4 293 aa17.23■□□□□ 0.35
USP6-202ENST00000357482 NBPF5PQ86XG9 351 aaPredicted RBP17.23■□□□□ 0.35
USP6-202ENST00000357482 TTLL6Q8N841 843 aa17.23■□□□□ 0.35
USP6-202ENST00000357482 DRC1Q96MC2 740 aa17.23■□□□□ 0.35
USP6-202ENST00000357482 LRRFIP2Q9Y608 721 aaKnown RBP17.23■□□□□ 0.35
USP6-202ENST00000357482 BRIP1Q9BX63 1249 aa17.23■□□□□ 0.35
USP6-202ENST00000357482 KCNF1Q9H3M0 494 aa17.23■□□□□ 0.35
USP6-202ENST00000357482 SH3BP1Q9Y3L3 701 aa17.23■□□□□ 0.35
USP6-202ENST00000357482 CCDC189A1A4V9 331 aa17.22■□□□□ 0.35
USP6-202ENST00000357482 NIP7Q9Y221 180 aaKnown RBP eCLIP17.22■□□□□ 0.35
USP6-202ENST00000357482 PTPRCP08575 1304 aa17.21■□□□□ 0.35
USP6-202ENST00000357482 CT47B1P0C2W7 299 aaPredicted RBP17.21■□□□□ 0.35
USP6-202ENST00000357482 EIF2S2P20042 333 aaKnown RBP17.21■□□□□ 0.35
USP6-202ENST00000357482 C9orf131Q5VYM1 1079 aa17.21■□□□□ 0.35
USP6-202ENST00000357482 KIF6Q6ZMV9 814 aa17.21■□□□□ 0.35
USP6-202ENST00000357482 ANKRD20A12PQ8NF67 263 aa17.21■□□□□ 0.35
USP6-202ENST00000357482 RNF217Q8TC41 542 aa17.21■□□□□ 0.35
USP6-202ENST00000357482 TOMM22Q9NS69 142 aa17.21■□□□□ 0.35
USP6-202ENST00000357482 IFT57Q9NWB7 429 aa17.21■□□□□ 0.35
USP6-202ENST00000357482 TRIM66O15016 1216 aa17.21■□□□□ 0.35
USP6-202ENST00000357482 MAP2K2P36507 400 aa17.21■□□□□ 0.35
USP6-202ENST00000357482 GYS2P54840 703 aa17.21■□□□□ 0.35
USP6-202ENST00000357482 MVPQ14764 893 aaKnown RBP17.21■□□□□ 0.35
USP6-202ENST00000357482 FBXO38Q6PIJ6 1188 aa17.21■□□□□ 0.35
USP6-202ENST00000357482 KIF2AO00139 706 aaPredicted RBP17.2■□□□□ 0.34
USP6-202ENST00000357482 H2AFXP16104 143 aaPredicted RBP17.2■□□□□ 0.34
USP6-202ENST00000357482 LIG1P18858 919 aa17.2■□□□□ 0.34
USP6-202ENST00000357482 GNAI1P63096 354 aa17.2■□□□□ 0.34
USP6-202ENST00000357482 CCDC183Q5T5S1 534 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms