RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 LZTFL1Q9NQ48 299 aa16.86■□□□□ 0.29
CHD4-201ENST00000357008 HMGXB3Q12766 1538 aa16.85■□□□□ 0.29
CHD4-201ENST00000357008 RUFY3Q7L099 469 aa16.85■□□□□ 0.29
CHD4-201ENST00000357008 FOXO3O43524 673 aa16.85■□□□□ 0.29
CHD4-201ENST00000357008 KSR2Q6VAB6 950 aa16.85■□□□□ 0.29
CHD4-201ENST00000357008 STX8Q9UNK0 236 aa16.85■□□□□ 0.29
CHD4-201ENST00000357008 TTC31Q49AM3 519 aaPredicted RBP16.85■□□□□ 0.29
CHD4-201ENST00000357008 PUF60Q9UHX1 559 aaKnown RBP16.85■□□□□ 0.29
CHD4-201ENST00000357008 GUCA1BQ9UMX6 200 aa16.85■□□□□ 0.29
CHD4-201ENST00000357008 CHMLP26374 656 aa16.85■□□□□ 0.29
CHD4-201ENST00000357008 VAV2P52735 878 aa16.85■□□□□ 0.29
CHD4-201ENST00000357008 ATP2B3Q16720 1220 aa16.85■□□□□ 0.29
CHD4-201ENST00000357008 HDXQ7Z353 690 aa16.85■□□□□ 0.29
CHD4-201ENST00000357008 JARID2Q92833 1246 aaPredicted RBP16.85■□□□□ 0.29
CHD4-201ENST00000357008 RPGRQ92834 1020 aaKnown RBP16.84■□□□□ 0.29
CHD4-201ENST00000357008 RAD50Q92878 1312 aa16.84■□□□□ 0.29
CHD4-201ENST00000357008 USP37Q86T82 979 aa16.84■□□□□ 0.29
CHD4-201ENST00000357008 RBSNQ9H1K0 784 aa16.84■□□□□ 0.29
CHD4-201ENST00000357008 TNNQ9UQP3 1299 aa16.84■□□□□ 0.29
CHD4-201ENST00000357008 SLC4A4Q9Y6R1 1079 aa16.84■□□□□ 0.29
CHD4-201ENST00000357008 BICDL2A1A5D9 508 aa16.84■□□□□ 0.29
CHD4-201ENST00000357008 PTPDC1A2A3K4 754 aa16.84■□□□□ 0.29
CHD4-201ENST00000357008 CCDC97Q96F63 343 aaPredicted RBP16.84■□□□□ 0.29
CHD4-201ENST00000357008 IQCGQ9H095 443 aaKnown RBP16.84■□□□□ 0.29
CHD4-201ENST00000357008 VAMP4O75379 141 aa16.84■□□□□ 0.29
CHD4-201ENST00000357008 CNGA4Q8IV77 575 aa16.84■□□□□ 0.29
CHD4-201ENST00000357008 ACEP12821 1306 aa16.84■□□□□ 0.29
CHD4-201ENST00000357008 RHOXF2BP0C7M4 288 aa16.83■□□□□ 0.29
CHD4-201ENST00000357008 DHX32Q7L7V1 743 aaKnown RBP16.83■□□□□ 0.29
CHD4-201ENST00000357008 TSNARE1Q96NA8 513 aa16.83■□□□□ 0.29
CHD4-201ENST00000357008 RHOXF2Q9BQY4 288 aa16.83■□□□□ 0.29
CHD4-201ENST00000357008 ADGRL1O94910 1474 aa16.83■□□□□ 0.29
CHD4-201ENST00000357008 PLB1Q6P1J6 1458 aa16.83■□□□□ 0.29
CHD4-201ENST00000357008 UBXN1Q04323 297 aa16.83■□□□□ 0.29
CHD4-201ENST00000357008 CAPZA3Q96KX2 299 aa16.83■□□□□ 0.29
CHD4-201ENST00000357008 PAG1Q9NWQ8 432 aa16.83■□□□□ 0.29
CHD4-201ENST00000357008 HLA-DOAP06340 250 aa16.83■□□□□ 0.28
CHD4-201ENST00000357008 UTP14AQ9BVJ6 771 aaKnown RBP16.83■□□□□ 0.28
CHD4-201ENST00000357008 PHACTR2O75167 634 aa16.83■□□□□ 0.28
CHD4-201ENST00000357008 MYL5Q02045 173 aa16.83■□□□□ 0.28
CHD4-201ENST00000357008 XAGE3Q8WTP9 111 aa16.83■□□□□ 0.28
CHD4-201ENST00000357008 KRT13P13646 458 aa16.83■□□□□ 0.28
CHD4-201ENST00000357008 CYP7A1P22680 504 aa16.83■□□□□ 0.28
CHD4-201ENST00000357008 LUC7L2Q9Y383 392 aaKnown RBP16.83■□□□□ 0.28
CHD4-201ENST00000357008 FERP16591 822 aa16.82■□□□□ 0.28
CHD4-201ENST00000357008 CALML3P27482 149 aa16.82■□□□□ 0.28
CHD4-201ENST00000357008 GSTO1P78417 241 aa16.82■□□□□ 0.28
CHD4-201ENST00000357008 PAIP2Q9BPZ3 127 aaKnown RBP16.82■□□□□ 0.28
CHD4-201ENST00000357008 SAMM50Q9Y512 469 aa16.82■□□□□ 0.28
CHD4-201ENST00000357008 CUL7Q14999 1698 aa16.82■□□□□ 0.28
CHD4-201ENST00000357008 CALM1P0DP23 149 aa16.82■□□□□ 0.28
CHD4-201ENST00000357008 CALM2P0DP24 149 aa16.82■□□□□ 0.28
CHD4-201ENST00000357008 CALM3P0DP25 149 aa16.82■□□□□ 0.28
CHD4-201ENST00000357008 SLC9C2Q5TAH2 1124 aa16.82■□□□□ 0.28
CHD4-201ENST00000357008 LMBR1LQ6UX01 489 aa16.82■□□□□ 0.28
CHD4-201ENST00000357008 FAM76AQ8TAV0 307 aa16.82■□□□□ 0.28
CHD4-201ENST00000357008 BAG1Q99933 345 aaPredicted RBP16.82■□□□□ 0.28
CHD4-201ENST00000357008 NUP160Q12769 1436 aa16.82■□□□□ 0.28
CHD4-201ENST00000357008 TSPY3P0CV98 308 aa16.82■□□□□ 0.28
CHD4-201ENST00000357008 TSPY8P0CW00 308 aa16.82■□□□□ 0.28
CHD4-201ENST00000357008 EVCP57679 992 aa16.82■□□□□ 0.28
CHD4-201ENST00000357008 APOBRQ0VD83 1088 aa16.82■□□□□ 0.28
CHD4-201ENST00000357008 CABP5Q9NP86 173 aa16.82■□□□□ 0.28
CHD4-201ENST00000357008 COPS6Q7L5N1 327 aa16.81■□□□□ 0.28
CHD4-201ENST00000357008 CPLX4Q7Z7G2 160 aa16.81■□□□□ 0.28
CHD4-201ENST00000357008 SREK1Q8WXA9 508 aaKnown RBP16.81■□□□□ 0.28
CHD4-201ENST00000357008 ZEB2O60315 1214 aa16.81■□□□□ 0.28
CHD4-201ENST00000357008 IGSF3O75054 1194 aa16.81■□□□□ 0.28
CHD4-201ENST00000357008 FAM160A1Q05DH4 1040 aa16.81■□□□□ 0.28
CHD4-201ENST00000357008 RRAGDQ9NQL2 400 aaPredicted RBP16.81■□□□□ 0.28
CHD4-201ENST00000357008 MAPKBP1O60336 1514 aa16.81■□□□□ 0.28
CHD4-201ENST00000357008 STX17P56962 302 aa16.81■□□□□ 0.28
CHD4-201ENST00000357008 SF3B2Q13435 895 aaKnown RBP16.81■□□□□ 0.28
CHD4-201ENST00000357008 CEP57Q86XR8 500 aa16.81■□□□□ 0.28
CHD4-201ENST00000357008 ATP2A1O14983 1001 aa16.81■□□□□ 0.28
CHD4-201ENST00000357008 PPP2R3AQ06190 1150 aa16.81■□□□□ 0.28
CHD4-201ENST00000357008 HEATR3Q7Z4Q2 680 aa16.81■□□□□ 0.28
CHD4-201ENST00000357008 NEK11Q8NG66 645 aa16.81■□□□□ 0.28
CHD4-201ENST00000357008 RASSF4Q9H2L5 321 aa16.81■□□□□ 0.28
CHD4-201ENST00000357008 CCDC152Q4G0S7 254 aa16.81■□□□□ 0.28
CHD4-201ENST00000357008 LINS1Q8NG48 757 aa16.81■□□□□ 0.28
CHD4-201ENST00000357008 RNF113AO15541 343 aaKnown RBP16.8■□□□□ 0.28
CHD4-201ENST00000357008 TRAF1Q13077 416 aa16.8■□□□□ 0.28
CHD4-201ENST00000357008 C6orf229H3BNL8 230 aa16.8■□□□□ 0.28
CHD4-201ENST00000357008 MXRA7P84157 204 aa16.8■□□□□ 0.28
CHD4-201ENST00000357008 GRIPAP1Q4V328 841 aa16.8■□□□□ 0.28
CHD4-201ENST00000357008 AKR1B15C9JRZ8 316 aaPredicted RBP16.8■□□□□ 0.28
CHD4-201ENST00000357008 CCDC114Q96M63 670 aa16.8■□□□□ 0.28
CHD4-201ENST00000357008 SELENOSQ9BQE4 189 aa16.8■□□□□ 0.28
CHD4-201ENST00000357008 RTL9Q8NET4 1388 aa16.8■□□□□ 0.28
CHD4-201ENST00000357008 CD109Q6YHK3 1445 aa16.8■□□□□ 0.28
CHD4-201ENST00000357008 SOS1Q07889 1333 aaPredicted RBP16.8■□□□□ 0.28
CHD4-201ENST00000357008 FBLN1P23142 703 aa16.8■□□□□ 0.28
CHD4-201ENST00000357008 TERF1P54274 439 aa16.8■□□□□ 0.28
CHD4-201ENST00000357008 TNNC1P63316 161 aa16.8■□□□□ 0.28
CHD4-201ENST00000357008 GTF3C6Q969F1 213 aa16.8■□□□□ 0.28
CHD4-201ENST00000357008 PA2G4Q9UQ80 394 aaKnown RBP16.8■□□□□ 0.28
CHD4-201ENST00000357008 ELP1O95163 1332 aa16.8■□□□□ 0.28
CHD4-201ENST00000357008 KRT2P35908 639 aa16.79■□□□□ 0.28
CHD4-201ENST00000357008 CFAP58Q5T655 872 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms