RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 LIG1P18858 919 aa10.97□□□□□ -0.65
SMG6-202ENST00000354901 FILIP1Q7Z7B0 1213 aa10.97□□□□□ -0.65
SMG6-202ENST00000354901 CPDO75976 1380 aa10.97□□□□□ -0.65
SMG6-202ENST00000354901 RBM6P78332 1123 aaKnown RBP10.97□□□□□ -0.65
SMG6-202ENST00000354901 TMEM87AQ8NBN3 555 aa10.97□□□□□ -0.65
SMG6-202ENST00000354901 TM6SF1Q9BZW5 370 aa10.97□□□□□ -0.65
SMG6-202ENST00000354901 ZCCHC17Q9NP64 241 aaKnown RBP10.97□□□□□ -0.65
SMG6-202ENST00000354901 COL18A1P39060 1754 aa10.97□□□□□ -0.65
SMG6-202ENST00000354901 HIP1O00291 1037 aa10.96□□□□□ -0.65
SMG6-202ENST00000354901 DHX16O60231 1041 aaKnown RBP10.96□□□□□ -0.65
SMG6-202ENST00000354901 KRT85P78386 507 aa10.96□□□□□ -0.65
SMG6-202ENST00000354901 TEX35Q5T0J7 233 aa10.96□□□□□ -0.65
SMG6-202ENST00000354901 KCNG1Q9UIX4 513 aa10.96□□□□□ -0.65
SMG6-202ENST00000354901 ARID5BQ14865 1188 aa10.96□□□□□ -0.66
SMG6-202ENST00000354901 ERCC6LQ2NKX8 1250 aa10.96□□□□□ -0.66
SMG6-202ENST00000354901 CCDC34Q96HJ3 373 aa10.96□□□□□ -0.66
SMG6-202ENST00000354901 METTL22Q9BUU2 404 aaPredicted RBP10.96□□□□□ -0.66
SMG6-202ENST00000354901 SPATA31A3Q5VYP0 1347 aa10.96□□□□□ -0.66
SMG6-202ENST00000354901 USP27XA6NNY8 438 aa10.96□□□□□ -0.66
SMG6-202ENST00000354901 RPS6KB1P23443 525 aa10.96□□□□□ -0.66
SMG6-202ENST00000354901 SLC20A2Q08357 652 aa10.96□□□□□ -0.66
SMG6-202ENST00000354901 PHKG2P15735 406 aa10.95□□□□□ -0.66
SMG6-202ENST00000354901 ST5P78524 1137 aa10.95□□□□□ -0.66
SMG6-202ENST00000354901 TOB2Q14106 344 aaPredicted RBP10.95□□□□□ -0.66
SMG6-202ENST00000354901 LMBR1LQ6UX01 489 aa10.95□□□□□ -0.66
SMG6-202ENST00000354901 ADAMTS7Q9UKP4 1686 aa10.95□□□□□ -0.66
SMG6-202ENST00000354901 TAF5LO75529 589 aa10.95□□□□□ -0.66
SMG6-202ENST00000354901 PTPN14Q15678 1187 aa10.95□□□□□ -0.66
SMG6-202ENST00000354901 TNNI3KQ59H18 835 aa10.95□□□□□ -0.66
SMG6-202ENST00000354901 CCDC85AQ96PX6 553 aaPredicted RBP10.95□□□□□ -0.66
SMG6-202ENST00000354901 DACT1Q9NYF0 836 aa10.95□□□□□ -0.66
SMG6-202ENST00000354901 FPGT-TNNI3KV9GXZ4 949 aa10.95□□□□□ -0.66
SMG6-202ENST00000354901 KDM3BQ7LBC6 1761 aa10.95□□□□□ -0.66
SMG6-202ENST00000354901 NHSL1Q5SYE7 1610 aa10.95□□□□□ -0.66
SMG6-202ENST00000354901 MYO1CO00159 1063 aa10.94□□□□□ -0.66
SMG6-202ENST00000354901 LMAN1P49257 510 aa10.94□□□□□ -0.66
SMG6-202ENST00000354901 PTPN12Q05209 780 aaKnown RBP10.94□□□□□ -0.66
SMG6-202ENST00000354901 BANK1Q8NDB2 785 aa10.94□□□□□ -0.66
SMG6-202ENST00000354901 BICD2Q8TD16 824 aa10.94□□□□□ -0.66
SMG6-202ENST00000354901 SPATA32Q96LK8 384 aa10.94□□□□□ -0.66
SMG6-202ENST00000354901 BCCIPQ9P287 314 aaKnown RBP eCLIP10.94□□□□□ -0.66
SMG6-202ENST00000354901 CYP2C19P33261 490 aa10.94□□□□□ -0.66
SMG6-202ENST00000354901 TIMM10P62072 90 aa10.94□□□□□ -0.66
SMG6-202ENST00000354901 BRF1Q92994 677 aa10.94□□□□□ -0.66
SMG6-202ENST00000354901 NUP62CLQ9H1M0 184 aa10.94□□□□□ -0.66
SMG6-202ENST00000354901 H3BQV1 296 aa10.94□□□□□ -0.66
SMG6-202ENST00000354901 GOLIM4O00461 696 aa10.94□□□□□ -0.66
SMG6-202ENST00000354901 SNRPA1P09661 255 aaKnown RBP10.94□□□□□ -0.66
SMG6-202ENST00000354901 CABP4P57796 275 aa10.94□□□□□ -0.66
SMG6-202ENST00000354901 IFFO2Q5TF58 517 aa10.94□□□□□ -0.66
SMG6-202ENST00000354901 Q6ZUG5 572 aa10.94□□□□□ -0.66
SMG6-202ENST00000354901 CHST3Q7LGC8 479 aa10.94□□□□□ -0.66
SMG6-202ENST00000354901 IFNL2Q8IZJ0 200 aa10.94□□□□□ -0.66
SMG6-202ENST00000354901 HEG1Q9ULI3 1381 aa10.93□□□□□ -0.66
SMG6-202ENST00000354901 CYP27B1O15528 508 aa10.93□□□□□ -0.66
SMG6-202ENST00000354901 NEK1Q96PY6 1258 aa10.93□□□□□ -0.66
SMG6-202ENST00000354901 ZBTB3Q9H5J0 574 aa10.93□□□□□ -0.66
SMG6-202ENST00000354901 CLIP2Q9UDT6 1046 aa10.93□□□□□ -0.66
SMG6-202ENST00000354901 SEC31AO94979 1220 aaKnown RBP10.93□□□□□ -0.66
SMG6-202ENST00000354901 TPM3P06753 285 aa10.93□□□□□ -0.66
SMG6-202ENST00000354901 CCDC192P0DO97 292 aa10.93□□□□□ -0.66
SMG6-202ENST00000354901 CCT2P78371 535 aaKnown RBP10.93□□□□□ -0.66
SMG6-202ENST00000354901 GUCY1B3Q02153 619 aa10.93□□□□□ -0.66
SMG6-202ENST00000354901 GNL2Q13823 731 aaKnown RBP10.93□□□□□ -0.66
SMG6-202ENST00000354901 BMS1Q14692 1282 aaKnown RBP10.93□□□□□ -0.66
SMG6-202ENST00000354901 TTLL5Q6EMB2 1281 aa10.93□□□□□ -0.66
SMG6-202ENST00000354901 ZNF594Q96JF6 807 aaPredicted RBP10.93□□□□□ -0.66
SMG6-202ENST00000354901 TNMDQ9H2S6 317 aa10.93□□□□□ -0.66
SMG6-202ENST00000354901 SOS2Q07890 1332 aaPredicted RBP10.93□□□□□ -0.66
SMG6-202ENST00000354901 A0A0G2JLW4 131 aa10.93□□□□□ -0.66
SMG6-202ENST00000354901 PDCP20941 246 aa10.93□□□□□ -0.66
SMG6-202ENST00000354901 RNF216Q9NWF9 866 aaPredicted RBP10.93□□□□□ -0.66
SMG6-202ENST00000354901 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.93□□□□□ -0.66
SMG6-202ENST00000354901 PAXBP1Q9Y5B6 917 aa10.93□□□□□ -0.66
SMG6-202ENST00000354901 UTYO14607 1347 aa10.92□□□□□ -0.66
SMG6-202ENST00000354901 CYP21A2P08686 494 aa10.92□□□□□ -0.66
SMG6-202ENST00000354901 ANKRD1Q15327 319 aa10.92□□□□□ -0.66
SMG6-202ENST00000354901 MAP3K11Q16584 847 aa10.92□□□□□ -0.66
SMG6-202ENST00000354901 ZSCAN26Q16670 478 aa10.92□□□□□ -0.66
SMG6-202ENST00000354901 ZSCAN25Q6NSZ9 544 aa10.92□□□□□ -0.66
SMG6-202ENST00000354901 KCNB2Q92953 911 aa10.92□□□□□ -0.66
SMG6-202ENST00000354901 KDM6AO15550 1401 aaPredicted RBP10.92□□□□□ -0.66
SMG6-202ENST00000354901 COL15A1P39059 1388 aa10.92□□□□□ -0.66
SMG6-202ENST00000354901 ARHGAP29Q52LW3 1261 aa10.92□□□□□ -0.66
SMG6-202ENST00000354901 TTLL7Q6ZT98 887 aa10.92□□□□□ -0.66
SMG6-202ENST00000354901 BRINP3Q76B58 766 aa10.92□□□□□ -0.66
SMG6-202ENST00000354901 CACTINQ8WUQ7 758 aaKnown RBP10.92□□□□□ -0.66
SMG6-202ENST00000354901 SMARCE1Q969G3 411 aa10.92□□□□□ -0.66
SMG6-202ENST00000354901 FMNL2Q96PY5 1086 aa10.92□□□□□ -0.66
SMG6-202ENST00000354901 FTOQ9C0B1 505 aaKnown RBP eCLIP10.92□□□□□ -0.66
SMG6-202ENST00000354901 ZNF446Q9NWS9 450 aa10.92□□□□□ -0.66
SMG6-202ENST00000354901 N4BP2Q86UW6 1770 aaPredicted RBP10.92□□□□□ -0.66
SMG6-202ENST00000354901 RGPD5Q99666 1765 aa10.92□□□□□ -0.66
SMG6-202ENST00000354901 CHRM1P11229 460 aaPredicted RBP10.92□□□□□ -0.66
SMG6-202ENST00000354901 CCAR2Q8N163 923 aaKnown RBP10.92□□□□□ -0.66
SMG6-202ENST00000354901 GOLGA6L1Q8N7Z2 621 aa10.92□□□□□ -0.66
SMG6-202ENST00000354901 LRRN4CLQ8ND94 238 aa10.92□□□□□ -0.66
SMG6-202ENST00000354901 COPRSQ9NQ92 184 aa10.92□□□□□ -0.66
SMG6-202ENST00000354901 SNRKQ9NRH2 765 aa10.92□□□□□ -0.66
SMG6-202ENST00000354901 A0A087WWV3 80 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms