RNA–Protein interactions for RNA: ENST00000353739.8

RNF38-203, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-203ENST00000353739 TPCN1Q9ULQ1 816 aa4.38□□□□□ -1.71
RNF38-203ENST00000353739 CNPY2Q9Y2B0 182 aa4.38□□□□□ -1.71
RNF38-203ENST00000353739 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.38□□□□□ -1.71
RNF38-203ENST00000353739 DDX60Q8IY21 1712 aaKnown RBP4.38□□□□□ -1.71
RNF38-203ENST00000353739 PKP1Q13835 747 aa4.38□□□□□ -1.71
RNF38-203ENST00000353739 TOB2Q14106 344 aaPredicted RBP4.38□□□□□ -1.71
RNF38-203ENST00000353739 UBE3CQ15386 1083 aa4.38□□□□□ -1.71
RNF38-203ENST00000353739 PUM3Q15397 648 aaKnown RBP4.38□□□□□ -1.71
RNF38-203ENST00000353739 TTLL7Q6ZT98 887 aa4.38□□□□□ -1.71
RNF38-203ENST00000353739 SMARCC2Q8TAQ2 1214 aa4.38□□□□□ -1.71
RNF38-203ENST00000353739 TMEM63CQ9P1W3 806 aa4.38□□□□□ -1.71
RNF38-203ENST00000353739 NOL7Q9UMY1 257 aaKnown RBP4.38□□□□□ -1.71
RNF38-203ENST00000353739 MYH15Q9Y2K3 1946 aa4.38□□□□□ -1.71
RNF38-203ENST00000353739 PRIM1P49642 420 aaKnown RBP4.38□□□□□ -1.71
RNF38-203ENST00000353739 CCDC152Q4G0S7 254 aa4.38□□□□□ -1.71
RNF38-203ENST00000353739 BRAPQ7Z569 592 aa4.38□□□□□ -1.71
RNF38-203ENST00000353739 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.38□□□□□ -1.71
RNF38-203ENST00000353739 XAGE2Q96GT9 111 aa4.38□□□□□ -1.71
RNF38-203ENST00000353739 AGXT2Q9BYV1 514 aa4.38□□□□□ -1.71
RNF38-203ENST00000353739 NAT10Q9H0A0 1025 aaKnown RBP4.38□□□□□ -1.71
RNF38-203ENST00000353739 GNL3LQ9NVN8 582 aaKnown RBP4.38□□□□□ -1.71
RNF38-203ENST00000353739 ZNF500O60304 480 aaPredicted RBP4.37□□□□□ -1.71
RNF38-203ENST00000353739 ARID4AP29374 1257 aaPredicted RBP4.37□□□□□ -1.71
RNF38-203ENST00000353739 ADCK5Q3MIX3 580 aa4.37□□□□□ -1.71
RNF38-203ENST00000353739 FOXD4L5Q5VV16 416 aaPredicted RBP4.37□□□□□ -1.71
RNF38-203ENST00000353739 SASS6Q6UVJ0 657 aa4.37□□□□□ -1.71
RNF38-203ENST00000353739 FOXD4L4Q8WXT5 416 aaPredicted RBP4.37□□□□□ -1.71
RNF38-203ENST00000353739 RBSNQ9H1K0 784 aa4.37□□□□□ -1.71
RNF38-203ENST00000353739 IL25Q9H293 177 aa4.37□□□□□ -1.71
RNF38-203ENST00000353739 BTG4Q9NY30 223 aa4.37□□□□□ -1.71
RNF38-203ENST00000353739 MYH7P12883 1935 aa4.37□□□□□ -1.71
RNF38-203ENST00000353739 ZNF335Q9H4Z2 1342 aaPredicted RBP4.37□□□□□ -1.71
RNF38-203ENST00000353739 RIC1Q4ADV7 1423 aa4.37□□□□□ -1.71
RNF38-203ENST00000353739 FIBPO43427 364 aa4.37□□□□□ -1.71
RNF38-203ENST00000353739 IGHMBP2P38935 993 aaKnown RBP4.37□□□□□ -1.71
RNF38-203ENST00000353739 RCAN1P53805 252 aa4.37□□□□□ -1.71
RNF38-203ENST00000353739 WASHC4Q2M389 1173 aa4.37□□□□□ -1.71
RNF38-203ENST00000353739 CCDC73Q6ZRK6 1079 aa4.37□□□□□ -1.71
RNF38-203ENST00000353739 BARGINQ6ZT62 677 aa4.37□□□□□ -1.71
RNF38-203ENST00000353739 GAS2L3Q86XJ1 694 aa4.37□□□□□ -1.71
RNF38-203ENST00000353739 LPIN2Q92539 896 aa4.37□□□□□ -1.71
RNF38-203ENST00000353739 TMEM87BQ96K49 555 aa4.37□□□□□ -1.71
RNF38-203ENST00000353739 UTP14AQ9BVJ6 771 aaKnown RBP4.37□□□□□ -1.71
RNF38-203ENST00000353739 NACAP1Q9BZK3 213 aa4.37□□□□□ -1.71
RNF38-203ENST00000353739 CCDC87Q9NVE4 849 aa4.37□□□□□ -1.71
RNF38-203ENST00000353739 RBM27Q9P2N5 1060 aaKnown RBP4.37□□□□□ -1.71
RNF38-203ENST00000353739 MAST3O60307 1309 aa4.37□□□□□ -1.71
RNF38-203ENST00000353739 IRS4O14654 1257 aaPredicted RBP4.37□□□□□ -1.71
RNF38-203ENST00000353739 ZNF213O14771 459 aa4.37□□□□□ -1.71
RNF38-203ENST00000353739 A1BGP04217 495 aa4.37□□□□□ -1.71
RNF38-203ENST00000353739 CYP19A1P11511 503 aaPredicted RBP4.37□□□□□ -1.71
RNF38-203ENST00000353739 HSPA2P54652 639 aa4.37□□□□□ -1.71
RNF38-203ENST00000353739 MAP3K12Q12852 859 aa4.37□□□□□ -1.71
RNF38-203ENST00000353739 ZRSR1Q15695 479 aaKnown RBP4.37□□□□□ -1.71
RNF38-203ENST00000353739 ALX1Q15699 326 aa4.37□□□□□ -1.71
RNF38-203ENST00000353739 SYNE3Q6ZMZ3 975 aa4.37□□□□□ -1.71
RNF38-203ENST00000353739 DDX46Q7L014 1031 aaKnown RBP4.37□□□□□ -1.71
RNF38-203ENST00000353739 ZNF589Q86UQ0 364 aaPredicted RBP4.37□□□□□ -1.71
RNF38-203ENST00000353739 NLRP10Q86W26 655 aa4.37□□□□□ -1.71
RNF38-203ENST00000353739 DZIP3Q86Y13 1208 aaKnown RBP4.37□□□□□ -1.71
RNF38-203ENST00000353739 PANK2Q9BZ23 570 aa4.37□□□□□ -1.71
RNF38-203ENST00000353739 KRT23Q9C075 422 aa4.37□□□□□ -1.71
RNF38-203ENST00000353739 TNMDQ9H2S6 317 aa4.37□□□□□ -1.71
RNF38-203ENST00000353739 CLSTN2Q9H4D0 955 aa4.37□□□□□ -1.71
RNF38-203ENST00000353739 TRMT112Q9UI30 125 aaKnown RBP4.37□□□□□ -1.71
RNF38-203ENST00000353739 MAST2Q6P0Q8 1798 aa4.37□□□□□ -1.71
RNF38-203ENST00000353739 SCN7AQ01118 1682 aa4.36□□□□□ -1.71
RNF38-203ENST00000353739 E7EWF7 191 aa4.36□□□□□ -1.71
RNF38-203ENST00000353739 ZBTB22O15209 634 aa4.36□□□□□ -1.71
RNF38-203ENST00000353739 HSPD1P10809 573 aaKnown RBP4.36□□□□□ -1.71
RNF38-203ENST00000353739 PCP11498 1178 aaKnown RBP4.36□□□□□ -1.71
RNF38-203ENST00000353739 EVCP57679 992 aa4.36□□□□□ -1.71
RNF38-203ENST00000353739 EXOSC10Q01780 885 aaKnown RBP4.36□□□□□ -1.71
RNF38-203ENST00000353739 SART3Q15020 963 aaKnown RBP4.36□□□□□ -1.71
RNF38-203ENST00000353739 KLHDC4Q8TBB5 520 aa4.36□□□□□ -1.71
RNF38-203ENST00000353739 PIGBQ92521 554 aa4.36□□□□□ -1.71
RNF38-203ENST00000353739 RNF41Q9H4P4 317 aaPredicted RBP4.36□□□□□ -1.71
RNF38-203ENST00000353739 PODXL2Q9NZ53 605 aa4.36□□□□□ -1.71
RNF38-203ENST00000353739 ZKSCAN5Q9Y2L8 839 aa4.36□□□□□ -1.71
RNF38-203ENST00000353739 UTRNP46939 3433 aa4.36□□□□□ -1.71
RNF38-203ENST00000353739 DOCK2Q92608 1830 aa4.36□□□□□ -1.71
RNF38-203ENST00000353739 ITGA6P23229 1130 aa4.36□□□□□ -1.71
RNF38-203ENST00000353739 CDC25BP30305 580 aa4.36□□□□□ -1.71
RNF38-203ENST00000353739 TRIM29Q14134 588 aa4.36□□□□□ -1.71
RNF38-203ENST00000353739 PPP2R5BQ15173 497 aa4.36□□□□□ -1.71
RNF38-203ENST00000353739 JMYQ8N9B5 988 aa4.36□□□□□ -1.71
RNF38-203ENST00000353739 NAP1L5Q96NT1 182 aaPredicted RBP4.36□□□□□ -1.71
RNF38-203ENST00000353739 HOOK1Q9UJC3 728 aaKnown RBP4.36□□□□□ -1.71
RNF38-203ENST00000353739 COL5A3P25940 1745 aaPredicted RBP4.36□□□□□ -1.71
RNF38-203ENST00000353739 MYO1BO43795 1136 aa4.36□□□□□ -1.71
RNF38-203ENST00000353739 NEMFO60524 1076 aa4.36□□□□□ -1.71
RNF38-203ENST00000353739 DNM1Q05193 864 aaKnown RBP4.36□□□□□ -1.71
RNF38-203ENST00000353739 RESTQ13127 1097 aa4.36□□□□□ -1.71
RNF38-203ENST00000353739 LDHAL6AQ6ZMR3 332 aa4.36□□□□□ -1.71
RNF38-203ENST00000353739 MTERF4Q7Z6M4 381 aaKnown RBP4.36□□□□□ -1.71
RNF38-203ENST00000353739 DNAJC10Q8IXB1 793 aa4.36□□□□□ -1.71
RNF38-203ENST00000353739 ZNF34Q8IZ26 560 aa4.36□□□□□ -1.71
RNF38-203ENST00000353739 TMTC2Q8N394 836 aa4.36□□□□□ -1.71
RNF38-203ENST00000353739 FAM200AQ8TCP9 573 aa4.36□□□□□ -1.71
RNF38-203ENST00000353739 BICD2Q8TD16 824 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms