RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 GNL3LQ9NVN8 582 aaKnown RBP15.26■□□□□ 0.03
IFT88-202ENST00000351808 RAB21Q9UL25 225 aa15.26■□□□□ 0.03
IFT88-202ENST00000351808 ADGRB1O14514 1584 aa15.26■□□□□ 0.03
IFT88-202ENST00000351808 NEURL4Q96JN8 1562 aa15.26■□□□□ 0.03
IFT88-202ENST00000351808 CPSF1Q10570 1443 aaKnown RBP15.26■□□□□ 0.03
IFT88-202ENST00000351808 RHOXF2BP0C7M4 288 aa15.26■□□□□ 0.03
IFT88-202ENST00000351808 NECTIN1Q15223 517 aa15.26■□□□□ 0.03
IFT88-202ENST00000351808 SRGAP1Q7Z6B7 1085 aa15.26■□□□□ 0.03
IFT88-202ENST00000351808 MSL3Q8N5Y2 521 aaKnown RBP15.26■□□□□ 0.03
IFT88-202ENST00000351808 AFAP1L1Q8TED9 768 aa15.26■□□□□ 0.03
IFT88-202ENST00000351808 RHOXF2Q9BQY4 288 aa15.26■□□□□ 0.03
IFT88-202ENST00000351808 RNF40O75150 1001 aa15.25■□□□□ 0.03
IFT88-202ENST00000351808 SCRN1Q12765 414 aa15.25■□□□□ 0.03
IFT88-202ENST00000351808 KARSQ15046 597 aaKnown RBP15.25■□□□□ 0.03
IFT88-202ENST00000351808 FAM43BQ6ZT52 329 aaPredicted RBP15.25■□□□□ 0.03
IFT88-202ENST00000351808 MIEF2Q96C03 454 aa15.25■□□□□ 0.03
IFT88-202ENST00000351808 IRX2Q9BZI1 471 aaPredicted RBP15.25■□□□□ 0.03
IFT88-202ENST00000351808 RCOR1Q9UKL0 485 aa15.25■□□□□ 0.03
IFT88-202ENST00000351808 LRRIQ3A6PVS8 624 aaPredicted RBP15.25■□□□□ 0.03
IFT88-202ENST00000351808 CUTAO60888 179 aa15.25■□□□□ 0.03
IFT88-202ENST00000351808 ADD1P35611 737 aaKnown RBP15.25■□□□□ 0.03
IFT88-202ENST00000351808 NCAPHQ15003 741 aa15.25■□□□□ 0.03
IFT88-202ENST00000351808 CREB3L3Q68CJ9 461 aa15.25■□□□□ 0.03
IFT88-202ENST00000351808 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.25■□□□□ 0.03
IFT88-202ENST00000351808 VSNL1P62760 191 aa15.24■□□□□ 0.03
IFT88-202ENST00000351808 BIRC2Q13490 618 aa15.24■□□□□ 0.03
IFT88-202ENST00000351808 NUTM2DQ5VT03 806 aaPredicted RBP15.24■□□□□ 0.03
IFT88-202ENST00000351808 SENP3Q9H4L4 574 aaPredicted RBP15.24■□□□□ 0.03
IFT88-202ENST00000351808 RBM8AQ9Y5S9 174 aaKnown RBP15.24■□□□□ 0.03
IFT88-202ENST00000351808 EMILIN1Q9Y6C2 1016 aa15.24■□□□□ 0.03
IFT88-202ENST00000351808 CD163L1Q9NR16 1453 aa15.24■□□□□ 0.03
IFT88-202ENST00000351808 CDC42BPGQ6DT37 1551 aa15.24■□□□□ 0.03
IFT88-202ENST00000351808 ARHGAP6O43182 974 aa15.24■□□□□ 0.03
IFT88-202ENST00000351808 FCHSD1Q86WN1 690 aa15.24■□□□□ 0.03
IFT88-202ENST00000351808 KCNB2Q92953 911 aa15.24■□□□□ 0.03
IFT88-202ENST00000351808 RABEP2Q9H5N1 569 aa15.24■□□□□ 0.03
IFT88-202ENST00000351808 C21orf2O43822 256 aa15.23■□□□□ 0.03
IFT88-202ENST00000351808 SURF6O75683 361 aaKnown RBP15.23■□□□□ 0.03
IFT88-202ENST00000351808 IL13P35225 146 aa15.23■□□□□ 0.03
IFT88-202ENST00000351808 ME1P48163 572 aa15.23■□□□□ 0.03
IFT88-202ENST00000351808 UBASH3AP57075 661 aa15.23■□□□□ 0.03
IFT88-202ENST00000351808 TOGARAM2Q6ZUX3 1019 aa15.23■□□□□ 0.03
IFT88-202ENST00000351808 TMEM139Q8IV31 216 aa15.23■□□□□ 0.03
IFT88-202ENST00000351808 USP28Q96RU2 1077 aa15.23■□□□□ 0.03
IFT88-202ENST00000351808 SLC24A3Q9HC58 644 aa15.23■□□□□ 0.03
IFT88-202ENST00000351808 HECW2Q9P2P5 1572 aa15.23■□□□□ 0.03
IFT88-202ENST00000351808 CHL1O00533 1208 aa15.23■□□□□ 0.03
IFT88-202ENST00000351808 EBAG9O00559 213 aa15.23■□□□□ 0.03
IFT88-202ENST00000351808 KIF3BO15066 747 aa15.23■□□□□ 0.03
IFT88-202ENST00000351808 ECM2O94769 699 aaPredicted RBP15.23■□□□□ 0.03
IFT88-202ENST00000351808 SETQ01105 290 aaPredicted RBP15.23■□□□□ 0.03
IFT88-202ENST00000351808 MSANTD4Q8NCY6 345 aa15.23■□□□□ 0.03
IFT88-202ENST00000351808 RUFY2Q8WXA3 655 aa15.23■□□□□ 0.03
IFT88-202ENST00000351808 FAXDC2Q96IV6 333 aa15.23■□□□□ 0.03
IFT88-202ENST00000351808 MIS18AQ9NYP9 233 aa15.23■□□□□ 0.03
IFT88-202ENST00000351808 KIAA1468Q9P260 1216 aa15.23■□□□□ 0.03
IFT88-202ENST00000351808 KIF1BO60333 1816 aa15.22■□□□□ 0.03
IFT88-202ENST00000351808 A0A1B0GVL5 298 aa15.22■□□□□ 0.03
IFT88-202ENST00000351808 NEBLO76041 1014 aa15.22■□□□□ 0.03
IFT88-202ENST00000351808 INPP5BP32019 993 aa15.22■□□□□ 0.03
IFT88-202ENST00000351808 ELF1P32519 619 aa15.22■□□□□ 0.03
IFT88-202ENST00000351808 TOB2Q14106 344 aaPredicted RBP15.22■□□□□ 0.03
IFT88-202ENST00000351808 NBPF20Q3BBV1 942 aa15.22■□□□□ 0.03
IFT88-202ENST00000351808 CFAP100Q494V2 611 aa15.22■□□□□ 0.03
IFT88-202ENST00000351808 BLOC1S2Q6QNY1 142 aa15.22■□□□□ 0.03
IFT88-202ENST00000351808 MCM10Q7L590 875 aa15.22■□□□□ 0.03
IFT88-202ENST00000351808 CNKSR2Q8WXI2 1034 aa15.22■□□□□ 0.03
IFT88-202ENST00000351808 DLG5Q8TDM6 1919 aa15.22■□□□□ 0.03
IFT88-202ENST00000351808 ASXL2Q76L83 1435 aa15.22■□□□□ 0.03
IFT88-202ENST00000351808 TMEM232C9JQI7 657 aa15.22■□□□□ 0.03
IFT88-202ENST00000351808 SERPINC1P01008 464 aa15.22■□□□□ 0.03
IFT88-202ENST00000351808 TFRCP02786 760 aaKnown RBP15.22■□□□□ 0.03
IFT88-202ENST00000351808 TOP1P11387 765 aaKnown RBP15.22■□□□□ 0.03
IFT88-202ENST00000351808 GPTP24298 496 aa15.22■□□□□ 0.03
IFT88-202ENST00000351808 DESI2Q9BSY9 194 aa15.22■□□□□ 0.03
IFT88-202ENST00000351808 IFT172Q9UG01 1749 aa15.22■□□□□ 0.03
IFT88-202ENST00000351808 GOLGA6L9A6NEM1 432 aa15.22■□□□□ 0.03
IFT88-202ENST00000351808 POTEB2H3BUK9 544 aa15.22■□□□□ 0.03
IFT88-202ENST00000351808 PAX7P23759 505 aa15.22■□□□□ 0.03
IFT88-202ENST00000351808 NAIF1Q69YI7 327 aaPredicted RBP15.22■□□□□ 0.03
IFT88-202ENST00000351808 AFAP1Q8N556 730 aa15.22■□□□□ 0.03
IFT88-202ENST00000351808 RHPN1Q8TCX5 695 aa15.22■□□□□ 0.03
IFT88-202ENST00000351808 BPIFA3Q9BQP9 254 aa15.22■□□□□ 0.03
IFT88-202ENST00000351808 CD248Q9HCU0 757 aa15.22■□□□□ 0.03
IFT88-202ENST00000351808 TAF6LQ9Y6J9 622 aa15.22■□□□□ 0.03
IFT88-202ENST00000351808 CAPN7Q9Y6W3 813 aa15.22■□□□□ 0.03
IFT88-202ENST00000351808 TET3O43151 1660 aa15.21■□□□□ 0.03
IFT88-202ENST00000351808 SOS1Q07889 1333 aaPredicted RBP15.21■□□□□ 0.03
IFT88-202ENST00000351808 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.21■□□□□ 0.03
IFT88-202ENST00000351808 SYF2O95926 243 aaKnown RBP15.21■□□□□ 0.03
IFT88-202ENST00000351808 PSMA5P28066 241 aa15.21■□□□□ 0.03
IFT88-202ENST00000351808 TTC19Q6DKK2 380 aaPredicted RBP15.21■□□□□ 0.03
IFT88-202ENST00000351808 MROH2AA6NES4 1674 aa15.21■□□□□ 0.03
IFT88-202ENST00000351808 ZFYVE9O95405 1425 aa15.21■□□□□ 0.03
IFT88-202ENST00000351808 NEDD9Q14511 834 aa15.21■□□□□ 0.02
IFT88-202ENST00000351808 ANKRD1Q15327 319 aa15.21■□□□□ 0.02
IFT88-202ENST00000351808 FMR1NBQ8N0W7 255 aaPredicted RBP15.21■□□□□ 0.02
IFT88-202ENST00000351808 CTCFLQ8NI51 663 aaPredicted RBP15.21■□□□□ 0.02
IFT88-202ENST00000351808 STAG1Q8WVM7 1258 aa15.21■□□□□ 0.02
IFT88-202ENST00000351808 RIN2Q8WYP3 895 aaPredicted RBP15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms