RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 PXDNLA1KZ92 1463 aa14.15□□□□□ -0.14
SMAD9-201ENST00000350148 SIGLEC1Q9BZZ2 1709 aa14.15□□□□□ -0.14
SMAD9-201ENST00000350148 CCDC183Q5T5S1 534 aa14.15□□□□□ -0.14
SMAD9-201ENST00000350148 DHX32Q7L7V1 743 aaKnown RBP14.15□□□□□ -0.14
SMAD9-201ENST00000350148 DBNDD2Q9BQY9 259 aa14.15□□□□□ -0.14
SMAD9-201ENST00000350148 TFCP2L1Q9NZI6 479 aa14.15□□□□□ -0.14
SMAD9-201ENST00000350148 IARSP41252 1262 aaKnown RBP14.15□□□□□ -0.14
SMAD9-201ENST00000350148 METAP2P50579 478 aaKnown RBP eCLIP14.15□□□□□ -0.14
SMAD9-201ENST00000350148 CRACR2BQ8N4Y2 399 aaPredicted RBP14.15□□□□□ -0.14
SMAD9-201ENST00000350148 DDX11Q96FC9 970 aa14.15□□□□□ -0.14
SMAD9-201ENST00000350148 PYM1Q9BRP8 204 aaKnown RBP14.14□□□□□ -0.15
SMAD9-201ENST00000350148 RTL9Q8NET4 1388 aa14.14□□□□□ -0.15
SMAD9-201ENST00000350148 POLA2Q14181 598 aa14.14□□□□□ -0.15
SMAD9-201ENST00000350148 CCDC43Q96MW1 224 aaKnown RBP14.14□□□□□ -0.15
SMAD9-201ENST00000350148 KNDC1Q76NI1 1749 aa14.14□□□□□ -0.15
SMAD9-201ENST00000350148 ZSCAN22P10073 491 aaPredicted RBP14.14□□□□□ -0.15
SMAD9-201ENST00000350148 NBPF14Q5TI25 921 aa14.14□□□□□ -0.15
SMAD9-201ENST00000350148 DDX19AQ9NUU7 478 aaKnown RBP14.14□□□□□ -0.15
SMAD9-201ENST00000350148 MAPK8IP2Q13387 824 aaPredicted RBP14.14□□□□□ -0.15
SMAD9-201ENST00000350148 MTX1Q13505 466 aa14.14□□□□□ -0.15
SMAD9-201ENST00000350148 TTLL7Q6ZT98 887 aa14.14□□□□□ -0.15
SMAD9-201ENST00000350148 SOS2Q07890 1332 aaPredicted RBP14.13□□□□□ -0.15
SMAD9-201ENST00000350148 TRAF1Q13077 416 aa14.13□□□□□ -0.15
SMAD9-201ENST00000350148 GPS2Q13227 327 aa14.13□□□□□ -0.15
SMAD9-201ENST00000350148 WTAPQ15007 396 aa14.13□□□□□ -0.15
SMAD9-201ENST00000350148 OTUD7AQ8TE49 926 aaPredicted RBP14.13□□□□□ -0.15
SMAD9-201ENST00000350148 BAG4O95429 457 aaKnown RBP14.13□□□□□ -0.15
SMAD9-201ENST00000350148 C3P01024 1663 aa14.13□□□□□ -0.15
SMAD9-201ENST00000350148 BMP15O95972 392 aa14.13□□□□□ -0.15
SMAD9-201ENST00000350148 MAP3K11Q16584 847 aa14.13□□□□□ -0.15
SMAD9-201ENST00000350148 MPNDQ8N594 471 aa14.13□□□□□ -0.15
SMAD9-201ENST00000350148 MYOM1P52179 1685 aa14.13□□□□□ -0.15
SMAD9-201ENST00000350148 CLSTN1O94985 981 aa14.13□□□□□ -0.15
SMAD9-201ENST00000350148 IPO7O95373 1038 aaKnown RBP14.12□□□□□ -0.15
SMAD9-201ENST00000350148 CREBRFQ8IUR6 639 aa14.12□□□□□ -0.15
SMAD9-201ENST00000350148 DSCC1Q9BVC3 393 aa14.12□□□□□ -0.15
SMAD9-201ENST00000350148 ATP2B2Q01814 1243 aa14.12□□□□□ -0.15
SMAD9-201ENST00000350148 STIM1Q13586 685 aa14.12□□□□□ -0.15
SMAD9-201ENST00000350148 ZNF772Q68DY9 489 aaPredicted RBP14.12□□□□□ -0.15
SMAD9-201ENST00000350148 STK32BQ9NY57 414 aa14.12□□□□□ -0.15
SMAD9-201ENST00000350148 CAVIN2O95810 425 aa14.12□□□□□ -0.15
SMAD9-201ENST00000350148 FILIP1LQ4L180 1135 aa14.12□□□□□ -0.15
SMAD9-201ENST00000350148 BRF1Q92994 677 aa14.12□□□□□ -0.15
SMAD9-201ENST00000350148 ZNF622Q969S3 477 aaKnown RBP eCLIP14.12□□□□□ -0.15
SMAD9-201ENST00000350148 KAT14Q9H8E8 782 aa14.12□□□□□ -0.15
SMAD9-201ENST00000350148 ORC3Q9UBD5 711 aaPredicted RBP14.12□□□□□ -0.15
SMAD9-201ENST00000350148 MTMR7Q9Y216 660 aa14.12□□□□□ -0.15
SMAD9-201ENST00000350148 KIF1AQ12756 1690 aa14.12□□□□□ -0.15
SMAD9-201ENST00000350148 DCAF8L1A6NGE4 600 aa14.12□□□□□ -0.15
SMAD9-201ENST00000350148 ESPNB1AK53 854 aa14.12□□□□□ -0.15
SMAD9-201ENST00000350148 ZBTB43O43298 467 aa14.12□□□□□ -0.15
SMAD9-201ENST00000350148 XRCC6P12956 609 aaKnown RBP eCLIP14.12□□□□□ -0.15
SMAD9-201ENST00000350148 PROSER3Q2NL68 480 aa14.12□□□□□ -0.15
SMAD9-201ENST00000350148 ATL3Q6DD88 541 aa14.12□□□□□ -0.15
SMAD9-201ENST00000350148 CEP57L1Q8IYX8 460 aa14.12□□□□□ -0.15
SMAD9-201ENST00000350148 FAM196AQ6ZSG2 479 aa14.12□□□□□ -0.15
SMAD9-201ENST00000350148 WDR66Q8TBY9 1149 aa14.12□□□□□ -0.15
SMAD9-201ENST00000350148 PES1O00541 588 aaKnown RBP14.11□□□□□ -0.15
SMAD9-201ENST00000350148 KLHL40Q2TBA0 621 aa14.11□□□□□ -0.15
SMAD9-201ENST00000350148 ASAP1Q9ULH1 1129 aa14.11□□□□□ -0.15
SMAD9-201ENST00000350148 MST1RQ04912 1400 aa14.11□□□□□ -0.15
SMAD9-201ENST00000350148 MAST3O60307 1309 aa14.11□□□□□ -0.15
SMAD9-201ENST00000350148 TSPY2A6NKD2 308 aa14.11□□□□□ -0.15
SMAD9-201ENST00000350148 SMTNL1A8MU46 457 aa14.11□□□□□ -0.15
SMAD9-201ENST00000350148 SMC2O95347 1197 aa14.11□□□□□ -0.15
SMAD9-201ENST00000350148 HSPA4P34932 840 aa14.11□□□□□ -0.15
SMAD9-201ENST00000350148 LLPHQ9BRT6 129 aaKnown RBP14.11□□□□□ -0.15
SMAD9-201ENST00000350148 ZC3H12CQ9C0D7 883 aaKnown RBP14.11□□□□□ -0.15
SMAD9-201ENST00000350148 HDAC9Q9UKV0 1011 aa14.11□□□□□ -0.15
SMAD9-201ENST00000350148 JCADQ9P266 1359 aa14.11□□□□□ -0.15
SMAD9-201ENST00000350148 KLF18A0A0U1RQI7 1052 aa14.11□□□□□ -0.15
SMAD9-201ENST00000350148 ATP2B1P20020 1258 aa14.11□□□□□ -0.15
SMAD9-201ENST00000350148 HIBADHP31937 336 aaKnown RBP14.11□□□□□ -0.15
SMAD9-201ENST00000350148 Q6ZUG5 572 aa14.11□□□□□ -0.15
SMAD9-201ENST00000350148 STK11IPQ8N1F8 1099 aa14.11□□□□□ -0.15
SMAD9-201ENST00000350148 CRKLP46109 303 aaKnown RBP14.11□□□□□ -0.15
SMAD9-201ENST00000350148 TIMM10P62072 90 aa14.11□□□□□ -0.15
SMAD9-201ENST00000350148 UBE2HP62256 183 aa14.11□□□□□ -0.15
SMAD9-201ENST00000350148 CEBPZQ03701 1054 aaKnown RBP14.11□□□□□ -0.15
SMAD9-201ENST00000350148 HAUS7Q99871 368 aa14.11□□□□□ -0.15
SMAD9-201ENST00000350148 CCP110O43303 1012 aa14.1□□□□□ -0.15
SMAD9-201ENST00000350148 CBFA2T2O43439 604 aa14.1□□□□□ -0.15
SMAD9-201ENST00000350148 HCLS1P14317 486 aaPredicted RBP14.1□□□□□ -0.15
SMAD9-201ENST00000350148 PIGBQ92521 554 aa14.1□□□□□ -0.15
SMAD9-201ENST00000350148 TMEM87BQ96K49 555 aa14.1□□□□□ -0.15
SMAD9-201ENST00000350148 PRC1O43663 620 aa14.1□□□□□ -0.15
SMAD9-201ENST00000350148 SEC24BO95487 1268 aa14.1□□□□□ -0.15
SMAD9-201ENST00000350148 LDHBP07195 334 aaKnown RBP14.1□□□□□ -0.15
SMAD9-201ENST00000350148 RAB3GAP1Q15042 981 aa14.1□□□□□ -0.15
SMAD9-201ENST00000350148 MAGEB6Q8N7X4 407 aa14.1□□□□□ -0.15
SMAD9-201ENST00000350148 CEMIPQ8WUJ3 1361 aa14.1□□□□□ -0.15
SMAD9-201ENST00000350148 RPS6KB1P23443 525 aa14.1□□□□□ -0.15
SMAD9-201ENST00000350148 CLEC4GQ6UXB4 293 aa14.1□□□□□ -0.15
SMAD9-201ENST00000350148 TMC4Q7Z404 712 aa14.1□□□□□ -0.15
SMAD9-201ENST00000350148 GSPT1P15170 499 aaKnown RBP14.09□□□□□ -0.15
SMAD9-201ENST00000350148 AK2P54819 239 aa14.09□□□□□ -0.15
SMAD9-201ENST00000350148 HAND2P61296 217 aa14.09□□□□□ -0.15
SMAD9-201ENST00000350148 SLC27A2O14975 620 aa14.09□□□□□ -0.15
SMAD9-201ENST00000350148 H7C1W4 665 aa14.09□□□□□ -0.15
SMAD9-201ENST00000350148 PPP2R5BQ15173 497 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms