RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 E4F1Q66K89 784 aaPredicted RBP20.78■□□□□ 0.92
VHL-202ENST00000345392 TAF3Q5VWG9 929 aa20.77■□□□□ 0.92
VHL-202ENST00000345392 SDF4Q9BRK5 362 aa20.77■□□□□ 0.92
VHL-202ENST00000345392 USP54Q70EL1 1684 aa20.77■□□□□ 0.92
VHL-202ENST00000345392 A0A1B0GVL5 298 aa20.77■□□□□ 0.92
VHL-202ENST00000345392 SYT10Q6XYQ8 523 aa20.77■□□□□ 0.92
VHL-202ENST00000345392 DDX46Q7L014 1031 aaKnown RBP20.77■□□□□ 0.92
VHL-202ENST00000345392 FAM53CQ9NYF3 392 aa20.77■□□□□ 0.92
VHL-202ENST00000345392 ZNF609O15014 1411 aa20.76■□□□□ 0.91
VHL-202ENST00000345392 LMO7Q8WWI1 1683 aa20.76■□□□□ 0.91
VHL-202ENST00000345392 PFKFB2O60825 505 aa20.76■□□□□ 0.91
VHL-202ENST00000345392 FMNL2Q96PY5 1086 aa20.76■□□□□ 0.91
VHL-202ENST00000345392 MYD88Q99836 296 aa20.76■□□□□ 0.91
VHL-202ENST00000345392 SMC2O95347 1197 aa20.76■□□□□ 0.91
VHL-202ENST00000345392 NAA16Q6N069 864 aaPredicted RBP20.76■□□□□ 0.91
VHL-202ENST00000345392 CHST3Q7LGC8 479 aa20.76■□□□□ 0.91
VHL-202ENST00000345392 U3KPZ7 1027 aaPredicted RBP20.76■□□□□ 0.91
VHL-202ENST00000345392 STRCP1A6NGW2 1772 aa20.75■□□□□ 0.91
VHL-202ENST00000345392 UTYO14607 1347 aa20.75■□□□□ 0.91
VHL-202ENST00000345392 TFCP2Q12800 502 aa20.75■□□□□ 0.91
VHL-202ENST00000345392 TMC6Q7Z403 805 aa20.75■□□□□ 0.91
VHL-202ENST00000345392 ILDR1Q86SU0 546 aaPredicted RBP20.75■□□□□ 0.91
VHL-202ENST00000345392 XAGE3Q8WTP9 111 aa20.75■□□□□ 0.91
VHL-202ENST00000345392 A0A0G2JLW4 131 aa20.75■□□□□ 0.91
VHL-202ENST00000345392 DPCR1Q3MIW9 517 aa20.75■□□□□ 0.91
VHL-202ENST00000345392 PPP1R13BQ96KQ4 1090 aa20.75■□□□□ 0.91
VHL-202ENST00000345392 XPO4Q9C0E2 1151 aaKnown RBP20.75■□□□□ 0.91
VHL-202ENST00000345392 PCDHA7Q9UN72 937 aa20.75■□□□□ 0.91
VHL-202ENST00000345392 ATP5JP18859 108 aa20.74■□□□□ 0.91
VHL-202ENST00000345392 GSDMDP57764 484 aa20.74■□□□□ 0.91
VHL-202ENST00000345392 MCMDC2Q4G0Z9 681 aa20.74■□□□□ 0.91
VHL-202ENST00000345392 ARMCX5Q6P1M9 558 aa20.74■□□□□ 0.91
VHL-202ENST00000345392 DDX21Q9NR30 783 aaKnown RBP eCLIP20.74■□□□□ 0.91
VHL-202ENST00000345392 IFNKQ9P0W0 207 aa20.74■□□□□ 0.91
VHL-202ENST00000345392 BIN1O00499 593 aa20.74■□□□□ 0.91
VHL-202ENST00000345392 DDX58O95786 925 aaKnown RBP20.74■□□□□ 0.91
VHL-202ENST00000345392 COPS6Q7L5N1 327 aa20.74■□□□□ 0.91
VHL-202ENST00000345392 NFATC2IPQ8NCF5 419 aa20.74■□□□□ 0.91
VHL-202ENST00000345392 ZNF396Q96N95 335 aaPredicted RBP20.74■□□□□ 0.91
VHL-202ENST00000345392 LLPHQ9BRT6 129 aaKnown RBP20.74■□□□□ 0.91
VHL-202ENST00000345392 NAT10Q9H0A0 1025 aaKnown RBP20.74■□□□□ 0.91
VHL-202ENST00000345392 TNNI3KQ59H18 835 aa20.73■□□□□ 0.91
VHL-202ENST00000345392 DDX17Q92841 729 aaKnown RBP20.73■□□□□ 0.91
VHL-202ENST00000345392 DBNDD2Q9BQY9 259 aa20.73■□□□□ 0.91
VHL-202ENST00000345392 OSBPL5Q9H0X9 879 aaPredicted RBP20.73■□□□□ 0.91
VHL-202ENST00000345392 FPGT-TNNI3KV9GXZ4 949 aa20.73■□□□□ 0.91
VHL-202ENST00000345392 NDUFA8P51970 172 aa20.73■□□□□ 0.91
VHL-202ENST00000345392 GORABQ5T7V8 394 aa20.73■□□□□ 0.91
VHL-202ENST00000345392 DHX32Q7L7V1 743 aaKnown RBP20.73■□□□□ 0.91
VHL-202ENST00000345392 FMR1NBQ8N0W7 255 aaPredicted RBP20.73■□□□□ 0.91
VHL-202ENST00000345392 OTUD7BQ6GQQ9 843 aa20.72■□□□□ 0.91
VHL-202ENST00000345392 HEG1Q9ULI3 1381 aa20.72■□□□□ 0.91
VHL-202ENST00000345392 NEURL1BA8MQ27 555 aa20.72■□□□□ 0.91
VHL-202ENST00000345392 MRPS27Q92552 414 aaKnown RBP20.72■□□□□ 0.91
VHL-202ENST00000345392 NLRP2Q9NX02 1062 aa20.72■□□□□ 0.91
VHL-202ENST00000345392 TMEM94Q12767 1356 aa20.72■□□□□ 0.91
VHL-202ENST00000345392 ATP5J2-PTCD1G3V325 749 aa20.71■□□□□ 0.91
VHL-202ENST00000345392 PTCD1O75127 700 aaKnown RBP20.71■□□□□ 0.91
VHL-202ENST00000345392 ZNF790Q6PG37 636 aa20.71■□□□□ 0.91
VHL-202ENST00000345392 KCND1Q9NSA2 647 aa20.71■□□□□ 0.91
VHL-202ENST00000345392 BBXQ8WY36 941 aaPredicted RBP20.71■□□□□ 0.91
VHL-202ENST00000345392 L2HGDHQ9H9P8 463 aa20.71■□□□□ 0.91
VHL-202ENST00000345392 KIF2AO00139 706 aaPredicted RBP20.71■□□□□ 0.91
VHL-202ENST00000345392 SFPQP23246 707 aaKnown RBP eCLIP20.71■□□□□ 0.91
VHL-202ENST00000345392 CLCN6P51797 869 aa20.71■□□□□ 0.91
VHL-202ENST00000345392 GCKRQ14397 625 aa20.71■□□□□ 0.91
VHL-202ENST00000345392 ZRSR1Q15695 479 aaKnown RBP20.71■□□□□ 0.91
VHL-202ENST00000345392 ISM2Q6H9L7 571 aa20.71■□□□□ 0.91
VHL-202ENST00000345392 H2AFXP16104 143 aaPredicted RBP20.7■□□□□ 0.9
VHL-202ENST00000345392 ZNF496Q96IT1 587 aaPredicted RBP20.7■□□□□ 0.9
VHL-202ENST00000345392 KIAA1468Q9P260 1216 aa20.7■□□□□ 0.9
VHL-202ENST00000345392 IMPACTQ9P2X3 320 aa20.7■□□□□ 0.9
VHL-202ENST00000345392 POLR3DP05423 398 aaPredicted RBP20.7■□□□□ 0.9
VHL-202ENST00000345392 CCDC66A2RUB6 948 aa20.69■□□□□ 0.9
VHL-202ENST00000345392 PTPN12Q05209 780 aaKnown RBP20.69■□□□□ 0.9
VHL-202ENST00000345392 NEXNQ0ZGT2 675 aa20.69■□□□□ 0.9
VHL-202ENST00000345392 BMS1Q14692 1282 aaKnown RBP20.69■□□□□ 0.9
VHL-202ENST00000345392 ARHGAP29Q52LW3 1261 aa20.69■□□□□ 0.9
VHL-202ENST00000345392 UBE3BQ7Z3V4 1068 aa20.69■□□□□ 0.9
VHL-202ENST00000345392 HOMER1Q86YM7 354 aa20.69■□□□□ 0.9
VHL-202ENST00000345392 TMEM51Q9NW97 253 aa20.69■□□□□ 0.9
VHL-202ENST00000345392 FHOD1Q9Y613 1164 aa20.69■□□□□ 0.9
VHL-202ENST00000345392 CLIC4Q9Y696 253 aa20.69■□□□□ 0.9
VHL-202ENST00000345392 SF3A1Q15459 793 aaKnown RBP20.69■□□□□ 0.9
VHL-202ENST00000345392 CCDC93Q567U6 631 aa20.69■□□□□ 0.9
VHL-202ENST00000345392 ADALQ6DHV7 355 aa20.68■□□□□ 0.9
VHL-202ENST00000345392 NOL10Q9BSC4 688 aaKnown RBP20.68■□□□□ 0.9
VHL-202ENST00000345392 PDIA3P30101 505 aaKnown RBP20.68■□□□□ 0.9
VHL-202ENST00000345392 EXOSC10Q01780 885 aaKnown RBP20.68■□□□□ 0.9
VHL-202ENST00000345392 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.68■□□□□ 0.99e-9■■■□□ 16
VHL-202ENST00000345392 HMGB1P09429 215 aaKnown RBP20.67■□□□□ 0.9
VHL-202ENST00000345392 FDPSP14324 419 aaKnown RBP20.67■□□□□ 0.9
VHL-202ENST00000345392 LMOD1P29536 600 aaPredicted RBP20.67■□□□□ 0.9
VHL-202ENST00000345392 KRT28Q7Z3Y7 464 aa20.67■□□□□ 0.9
VHL-202ENST00000345392 HAUS7Q99871 368 aa20.67■□□□□ 0.9
VHL-202ENST00000345392 COPRSQ9NQ92 184 aa20.67■□□□□ 0.9
VHL-202ENST00000345392 GPHNQ9NQX3 736 aaPredicted RBP20.67■□□□□ 0.9
VHL-202ENST00000345392 SALL1Q9NSC2 1324 aa20.67■□□□□ 0.9
VHL-202ENST00000345392 RGPD5Q99666 1765 aa20.67■□□□□ 0.9
VHL-202ENST00000345392 CCDC150Q8NCX0 1101 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms