RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 CTNNA3Q9UI47 895 aa4.26□□□□□ -1.73
SYNE2-202ENST00000344113 C10orf88Q9H8K7 445 aa4.26□□□□□ -1.73
SYNE2-202ENST00000344113 ACTR5Q9H9F9 607 aaPredicted RBP4.26□□□□□ -1.73
SYNE2-202ENST00000344113 XPCQ01831 940 aaPredicted RBP4.26□□□□□ -1.73
SYNE2-202ENST00000344113 GNL3LQ9NVN8 582 aaKnown RBP4.26□□□□□ -1.73
SYNE2-202ENST00000344113 ARHGAP10A1A4S6 786 aa4.26□□□□□ -1.73
SYNE2-202ENST00000344113 INAQ16352 499 aa4.26□□□□□ -1.73
SYNE2-202ENST00000344113 TMED8Q6PL24 325 aaPredicted RBP4.26□□□□□ -1.73
SYNE2-202ENST00000344113 RIOK1Q9BRS2 568 aaKnown RBP4.26□□□□□ -1.73
SYNE2-202ENST00000344113 PANK2Q9BZ23 570 aa4.26□□□□□ -1.73
SYNE2-202ENST00000344113 PPIP5K1Q6PFW1 1433 aa4.26□□□□□ -1.73
SYNE2-202ENST00000344113 CPA3P15088 417 aa4.26□□□□□ -1.73
SYNE2-202ENST00000344113 STIM1Q13586 685 aa4.26□□□□□ -1.73
SYNE2-202ENST00000344113 PRR23CQ6ZRP0 262 aa4.26□□□□□ -1.73
SYNE2-202ENST00000344113 HEATR3Q7Z4Q2 680 aa4.26□□□□□ -1.73
SYNE2-202ENST00000344113 NUF2Q9BZD4 464 aa4.26□□□□□ -1.73
SYNE2-202ENST00000344113 AHCYL1O43865 530 aa4.26□□□□□ -1.73
SYNE2-202ENST00000344113 SERPINB8P50452 374 aa4.26□□□□□ -1.73
SYNE2-202ENST00000344113 KIF1BPQ96EK5 621 aa4.26□□□□□ -1.73
SYNE2-202ENST00000344113 PSMA5P28066 241 aa4.26□□□□□ -1.73
SYNE2-202ENST00000344113 POLD1P28340 1107 aa4.26□□□□□ -1.73
SYNE2-202ENST00000344113 NEK2P51955 445 aa4.26□□□□□ -1.73
SYNE2-202ENST00000344113 MRPL46Q9H2W6 279 aaKnown RBP4.26□□□□□ -1.73
SYNE2-202ENST00000344113 FOXD4L5Q5VV16 416 aaPredicted RBP4.26□□□□□ -1.73
SYNE2-202ENST00000344113 FOXD4L4Q8WXT5 416 aaPredicted RBP4.26□□□□□ -1.73
SYNE2-202ENST00000344113 ZNF280DQ6N043 979 aa4.26□□□□□ -1.73
SYNE2-202ENST00000344113 SAMD15Q9P1V8 674 aa4.26□□□□□ -1.73
SYNE2-202ENST00000344113 NDC80O14777 642 aa4.26□□□□□ -1.73
SYNE2-202ENST00000344113 CIB2O75838 187 aa4.26□□□□□ -1.73
SYNE2-202ENST00000344113 NDUFA5Q16718 116 aa4.26□□□□□ -1.73
SYNE2-202ENST00000344113 MMRN2Q9H8L6 949 aa4.26□□□□□ -1.73
SYNE2-202ENST00000344113 TEKT2Q9UIF3 430 aa4.26□□□□□ -1.73
SYNE2-202ENST00000344113 TRAF3IP3Q9Y228 551 aa4.26□□□□□ -1.73
SYNE2-202ENST00000344113 PABPN1LA6NDY0 278 aaKnown RBP4.26□□□□□ -1.73
SYNE2-202ENST00000344113 EFCAB8A8MWE9 144 aa4.26□□□□□ -1.73
SYNE2-202ENST00000344113 KINO60870 393 aaKnown RBP4.26□□□□□ -1.73
SYNE2-202ENST00000344113 ROR2Q01974 943 aaKnown RBP4.26□□□□□ -1.73
SYNE2-202ENST00000344113 SPIDRQ14159 915 aa4.26□□□□□ -1.73
SYNE2-202ENST00000344113 SRLQ86TD4 932 aa4.26□□□□□ -1.73
SYNE2-202ENST00000344113 PECAM1P16284 738 aaPredicted RBP4.26□□□□□ -1.73
SYNE2-202ENST00000344113 SMCR8Q8TEV9 937 aaPredicted RBP4.26□□□□□ -1.73
SYNE2-202ENST00000344113 RABGGTAQ92696 567 aa4.26□□□□□ -1.73
SYNE2-202ENST00000344113 ZNF653Q96CK0 615 aa4.26□□□□□ -1.73
SYNE2-202ENST00000344113 LZTS2Q9BRK4 669 aa4.26□□□□□ -1.73
SYNE2-202ENST00000344113 CENPKQ9BS16 269 aa4.25□□□□□ -1.73
SYNE2-202ENST00000344113 ANKRD30BQ9BXX2 1392 aa4.25□□□□□ -1.73
SYNE2-202ENST00000344113 MTRF1O75570 445 aaKnown RBP4.25□□□□□ -1.73
SYNE2-202ENST00000344113 PCK1P35558 622 aa4.25□□□□□ -1.73
SYNE2-202ENST00000344113 AMOTQ4VCS5 1084 aa4.25□□□□□ -1.73
SYNE2-202ENST00000344113 CCDC183Q5T5S1 534 aa4.25□□□□□ -1.73
SYNE2-202ENST00000344113 ENAHQ8N8S7 591 aaPredicted RBP4.25□□□□□ -1.73
SYNE2-202ENST00000344113 TRPC6Q9Y210 931 aa4.25□□□□□ -1.73
SYNE2-202ENST00000344113 SH3BP1Q9Y3L3 701 aa4.25□□□□□ -1.73
SYNE2-202ENST00000344113 CDC25BP30305 580 aa4.25□□□□□ -1.73
SYNE2-202ENST00000344113 EPSTI1Q96J88 318 aa4.25□□□□□ -1.73
SYNE2-202ENST00000344113 FAM192AQ9GZU8 254 aa4.25□□□□□ -1.73
SYNE2-202ENST00000344113 SCHIP1Q9P0W5 487 aaPredicted RBP4.25□□□□□ -1.73
SYNE2-202ENST00000344113 MIEF2Q96C03 454 aa4.25□□□□□ -1.73
SYNE2-202ENST00000344113 RIPOR2Q9Y4F9 1068 aa4.25□□□□□ -1.73
SYNE2-202ENST00000344113 PARNO95453 639 aaKnown RBP4.25□□□□□ -1.73
SYNE2-202ENST00000344113 FLOT1O75955 427 aa4.25□□□□□ -1.73
SYNE2-202ENST00000344113 C1orf131Q8NDD1 294 aaKnown RBP4.25□□□□□ -1.73
SYNE2-202ENST00000344113 PALMDQ9NP74 551 aa4.25□□□□□ -1.73
SYNE2-202ENST00000344113 PLCB1Q9NQ66 1216 aa4.25□□□□□ -1.73
SYNE2-202ENST00000344113 CTAGE9A4FU28 777 aa4.25□□□□□ -1.73
SYNE2-202ENST00000344113 STX17P56962 302 aa4.25□□□□□ -1.73
SYNE2-202ENST00000344113 KRBA2Q6ZNG9 492 aa4.25□□□□□ -1.73
SYNE2-202ENST00000344113 ARMCX6Q7L4S7 300 aa4.25□□□□□ -1.73
SYNE2-202ENST00000344113 DDX23Q9BUQ8 820 aaKnown RBP4.25□□□□□ -1.73
SYNE2-202ENST00000344113 RPL26L1Q9UNX3 145 aaKnown RBP4.25□□□□□ -1.73
SYNE2-202ENST00000344113 PSDA5PKW4 1024 aaPredicted RBP4.25□□□□□ -1.73
SYNE2-202ENST00000344113 FAM160A1Q05DH4 1040 aa4.25□□□□□ -1.73
SYNE2-202ENST00000344113 ARHGAP29Q52LW3 1261 aa4.25□□□□□ -1.73
SYNE2-202ENST00000344113 ANO2Q9NQ90 1003 aa4.25□□□□□ -1.73
SYNE2-202ENST00000344113 IDH3BO43837 385 aa4.25□□□□□ -1.73
SYNE2-202ENST00000344113 TMCC1O94876 653 aa4.25□□□□□ -1.73
SYNE2-202ENST00000344113 PAWRQ96IZ0 340 aaKnown RBP4.25□□□□□ -1.73
SYNE2-202ENST00000344113 FAM25EA8MYX2 175 aa4.25□□□□□ -1.73
SYNE2-202ENST00000344113 RFC1P35251 1148 aaPredicted RBP4.25□□□□□ -1.73
SYNE2-202ENST00000344113 CORO7P57737 925 aa4.25□□□□□ -1.73
SYNE2-202ENST00000344113 PRR16Q569H4 304 aa4.25□□□□□ -1.73
SYNE2-202ENST00000344113 SKAP1Q86WV1 359 aa4.25□□□□□ -1.73
SYNE2-202ENST00000344113 MYO1AQ9UBC5 1043 aa4.25□□□□□ -1.73
SYNE2-202ENST00000344113 ANKRD1Q15327 319 aa4.25□□□□□ -1.73
SYNE2-202ENST00000344113 TBCAO75347 108 aaKnown RBP4.25□□□□□ -1.73
SYNE2-202ENST00000344113 TMCO1Q9UM00 188 aa4.25□□□□□ -1.73
SYNE2-202ENST00000344113 HDLBPQ00341 1268 aaKnown RBP4.25□□□□□ -1.73
SYNE2-202ENST00000344113 SLC5A9Q2M3M2 681 aa4.25□□□□□ -1.73
SYNE2-202ENST00000344113 ACBD5Q5T8D3 534 aaPredicted RBP4.25□□□□□ -1.73
SYNE2-202ENST00000344113 EFHD2Q96C19 240 aaPredicted RBP4.25□□□□□ -1.73
SYNE2-202ENST00000344113 PYM1Q9BRP8 204 aaKnown RBP4.25□□□□□ -1.73
SYNE2-202ENST00000344113 HIP1O00291 1037 aa4.25□□□□□ -1.73
SYNE2-202ENST00000344113 XPO1O14980 1071 aaKnown RBP4.25□□□□□ -1.73
SYNE2-202ENST00000344113 PPP1R7Q15435 360 aa4.25□□□□□ -1.73
SYNE2-202ENST00000344113 KRT7P08729 469 aa4.25□□□□□ -1.73
SYNE2-202ENST00000344113 TUBA1BP68363 451 aa4.25□□□□□ -1.73
SYNE2-202ENST00000344113 TUBA1AQ71U36 451 aa4.25□□□□□ -1.73
SYNE2-202ENST00000344113 WASLO00401 505 aaPredicted RBP4.24□□□□□ -1.73
SYNE2-202ENST00000344113 KRR1Q13601 381 aaKnown RBP4.24□□□□□ -1.73
SYNE2-202ENST00000344113 RGL3Q3MIN7 710 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms