RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 BLOC1S2Q6QNY1 142 aa22.21■■□□□ 1.15
HOXA9-201ENST00000343483 CCNL1Q9UK58 526 aaPredicted RBP22.21■■□□□ 1.15
HOXA9-201ENST00000343483 NHSQ6T4R5 1651 aa22.21■■□□□ 1.15
HOXA9-201ENST00000343483 MRE11P49959 708 aa22.21■■□□□ 1.15
HOXA9-201ENST00000343483 PUM3Q15397 648 aaKnown RBP22.21■■□□□ 1.15
HOXA9-201ENST00000343483 LRRFIP1Q32MZ4 808 aaKnown RBP22.21■■□□□ 1.15
HOXA9-201ENST00000343483 FOXD4L5Q5VV16 416 aaPredicted RBP22.21■■□□□ 1.15
HOXA9-201ENST00000343483 FOXD4L4Q8WXT5 416 aaPredicted RBP22.21■■□□□ 1.15
HOXA9-201ENST00000343483 ISY1Q9ULR0 285 aaKnown RBP22.21■■□□□ 1.15
HOXA9-201ENST00000343483 LRP5O75197 1615 aa22.21■■□□□ 1.15
HOXA9-201ENST00000343483 BTAF1O14981 1849 aa22.2■■□□□ 1.14
HOXA9-201ENST00000343483 SPEF2Q9C093 1822 aa22.2■■□□□ 1.14
HOXA9-201ENST00000343483 MAST3O60307 1309 aa22.2■■□□□ 1.14
HOXA9-201ENST00000343483 BAG6P46379 1132 aa22.2■■□□□ 1.14
HOXA9-201ENST00000343483 COL9A3Q14050 684 aaPredicted RBP22.2■■□□□ 1.14
HOXA9-201ENST00000343483 BICDL1Q6ZP65 573 aa22.2■■□□□ 1.14
HOXA9-201ENST00000343483 DDX49Q9Y6V7 483 aaKnown RBP22.2■■□□□ 1.14
HOXA9-201ENST00000343483 GNPATO15228 680 aa22.19■■□□□ 1.14
HOXA9-201ENST00000343483 LARGE1O95461 756 aa22.19■■□□□ 1.14
HOXA9-201ENST00000343483 MCAMP43121 646 aa22.19■■□□□ 1.14
HOXA9-201ENST00000343483 TSGA10IPQ3SY00 556 aa22.19■■□□□ 1.14
HOXA9-201ENST00000343483 KRT32Q14532 448 aa22.19■■□□□ 1.14
HOXA9-201ENST00000343483 KLHL40Q2TBA0 621 aa22.19■■□□□ 1.14
HOXA9-201ENST00000343483 TCEANC2Q96MN5 208 aa22.19■■□□□ 1.14
HOXA9-201ENST00000343483 CAMKK2Q96RR4 588 aa22.19■■□□□ 1.14
HOXA9-201ENST00000343483 BCORQ6W2J9 1755 aa22.18■■□□□ 1.14
HOXA9-201ENST00000343483 RPS6KB1P23443 525 aa22.18■■□□□ 1.14
HOXA9-201ENST00000343483 IGHMBP2P38935 993 aaKnown RBP22.18■■□□□ 1.14
HOXA9-201ENST00000343483 WASHC4Q2M389 1173 aa22.18■■□□□ 1.14
HOXA9-201ENST00000343483 LPIN2Q92539 896 aa22.18■■□□□ 1.14
HOXA9-201ENST00000343483 M0R2C6 588 aa22.18■■□□□ 1.14
HOXA9-201ENST00000343483 CYP21A2P08686 494 aa22.18■■□□□ 1.14
HOXA9-201ENST00000343483 ERFEQ4G0M1 354 aa22.18■■□□□ 1.14
HOXA9-201ENST00000343483 RC3H1Q5TC82 1133 aaKnown RBP22.18■■□□□ 1.14
HOXA9-201ENST00000343483 GRPEL1Q9HAV7 217 aa22.18■■□□□ 1.14
HOXA9-201ENST00000343483 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.18■■□□□ 1.14
HOXA9-201ENST00000343483 RPS6KA4O75676 772 aa22.17■■□□□ 1.14
HOXA9-201ENST00000343483 ZFYP08048 801 aaPredicted RBP22.17■■□□□ 1.14
HOXA9-201ENST00000343483 CCDC102BQ68D86 513 aa22.17■■□□□ 1.14
HOXA9-201ENST00000343483 PROM2Q8N271 834 aa22.17■■□□□ 1.14
HOXA9-201ENST00000343483 OSBP2Q969R2 916 aa22.17■■□□□ 1.14
HOXA9-201ENST00000343483 ZSCAN31Q96LW9 406 aaPredicted RBP22.17■■□□□ 1.14
HOXA9-201ENST00000343483 DSCC1Q9BVC3 393 aa22.17■■□□□ 1.14
HOXA9-201ENST00000343483 SH2B1Q9NRF2 756 aaPredicted RBP22.17■■□□□ 1.14
HOXA9-201ENST00000343483 DDX60Q8IY21 1712 aaKnown RBP22.17■■□□□ 1.14
HOXA9-201ENST00000343483 RTL9Q8NET4 1388 aa22.16■■□□□ 1.14
HOXA9-201ENST00000343483 BRD1O95696 1058 aa22.16■■□□□ 1.14
HOXA9-201ENST00000343483 PHKA1P46020 1223 aa22.16■■□□□ 1.14
HOXA9-201ENST00000343483 TBC1D9BQ66K14 1250 aa22.16■■□□□ 1.14
HOXA9-201ENST00000343483 CCDC83Q8IWF9 413 aa22.16■■□□□ 1.14
HOXA9-201ENST00000343483 ZNF512BQ96KM6 892 aaPredicted RBP22.16■■□□□ 1.14
HOXA9-201ENST00000343483 LMBRD1Q9NUN5 540 aa22.16■■□□□ 1.14
HOXA9-201ENST00000343483 HSPD1P10809 573 aaKnown RBP22.16■■□□□ 1.14
HOXA9-201ENST00000343483 SLC5A1P13866 664 aa22.16■■□□□ 1.14
HOXA9-201ENST00000343483 FGFR2P21802 821 aa22.16■■□□□ 1.14
HOXA9-201ENST00000343483 PANK2Q9BZ23 570 aa22.16■■□□□ 1.14
HOXA9-201ENST00000343483 SRP68Q9UHB9 627 aaKnown RBP22.16■■□□□ 1.14
HOXA9-201ENST00000343483 SNAP23O00161 211 aa22.15■■□□□ 1.14
HOXA9-201ENST00000343483 GTF2E1P29083 439 aaPredicted RBP22.15■■□□□ 1.14
HOXA9-201ENST00000343483 NEK1Q96PY6 1258 aa22.15■■□□□ 1.14
HOXA9-201ENST00000343483 BCL2L12Q9HB09 334 aa22.15■■□□□ 1.14
HOXA9-201ENST00000343483 NARFQ9UHQ1 456 aa22.15■■□□□ 1.14
HOXA9-201ENST00000343483 TPCN1Q9ULQ1 816 aa22.15■■□□□ 1.14
HOXA9-201ENST00000343483 ZPR1O75312 459 aa22.15■■□□□ 1.14
HOXA9-201ENST00000343483 ANKRD1Q15327 319 aa22.15■■□□□ 1.14
HOXA9-201ENST00000343483 ME3Q16798 604 aa22.15■■□□□ 1.14
HOXA9-201ENST00000343483 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.15■■□□□ 1.14
HOXA9-201ENST00000343483 SMC3Q9UQE7 1217 aa22.15■■□□□ 1.14
HOXA9-201ENST00000343483 RTCBQ9Y3I0 505 aaKnown RBP22.15■■□□□ 1.14
HOXA9-201ENST00000343483 UQCRFS1P1P0C7P4 283 aa22.13■■□□□ 1.13
HOXA9-201ENST00000343483 ARID4AP29374 1257 aaPredicted RBP22.13■■□□□ 1.13
HOXA9-201ENST00000343483 C3orf67Q6ZVT6 689 aa22.13■■□□□ 1.13
HOXA9-201ENST00000343483 GAS2L3Q86XJ1 694 aa22.13■■□□□ 1.13
HOXA9-201ENST00000343483 CDC5LQ99459 802 aaKnown RBP22.13■■□□□ 1.13
HOXA9-201ENST00000343483 TTF1Q15361 905 aaPredicted RBP22.13■■□□□ 1.13
HOXA9-201ENST00000343483 NECAB1Q8N987 351 aa22.13■■□□□ 1.13
HOXA9-201ENST00000343483 APPBP2Q92624 585 aa22.13■■□□□ 1.13
HOXA9-201ENST00000343483 CHAMP1Q96JM3 812 aa22.13■■□□□ 1.13
HOXA9-201ENST00000343483 LAMB2P55268 1798 aa22.12■■□□□ 1.13
HOXA9-201ENST00000343483 RGL2O15211 777 aa22.12■■□□□ 1.13
HOXA9-201ENST00000343483 PRPF40AO75400 957 aaKnown RBP22.12■■□□□ 1.13
HOXA9-201ENST00000343483 SETDB2Q96T68 719 aa22.12■■□□□ 1.13
HOXA9-201ENST00000343483 SCN7AQ01118 1682 aa22.12■■□□□ 1.13
HOXA9-201ENST00000343483 IDH1O75874 414 aaKnown RBP22.11■■□□□ 1.13
HOXA9-201ENST00000343483 NCLP19338 710 aaKnown RBP22.11■■□□□ 1.13
HOXA9-201ENST00000343483 TOB2Q14106 344 aaPredicted RBP22.11■■□□□ 1.13
HOXA9-201ENST00000343483 AMIGO3Q86WK7 504 aa22.11■■□□□ 1.13
HOXA9-201ENST00000343483 PUS7LQ9H0K6 701 aaKnown RBP22.11■■□□□ 1.13
HOXA9-201ENST00000343483 ALDH8A1Q9H2A2 487 aaPredicted RBP22.11■■□□□ 1.13
HOXA9-201ENST00000343483 PIH1D3Q9NQM4 214 aaKnown RBP22.11■■□□□ 1.13
HOXA9-201ENST00000343483 WDR33Q9C0J8 1336 aaKnown RBP22.11■■□□□ 1.13
HOXA9-201ENST00000343483 PLSCR1O15162 318 aa22.11■■□□□ 1.13
HOXA9-201ENST00000343483 CHRNDQ07001 517 aa22.11■■□□□ 1.13
HOXA9-201ENST00000343483 SLC9C2Q5TAH2 1124 aa22.11■■□□□ 1.13
HOXA9-201ENST00000343483 ZSCAN25Q6NSZ9 544 aa22.11■■□□□ 1.13
HOXA9-201ENST00000343483 STOX1Q6ZVD7 989 aa22.11■■□□□ 1.13
HOXA9-201ENST00000343483 ST3GAL1Q11201 340 aa22.1■■□□□ 1.13
HOXA9-201ENST00000343483 A0A0G2JLW4 131 aa22.1■■□□□ 1.13
HOXA9-201ENST00000343483 DTNBO60941 627 aa22.1■■□□□ 1.13
HOXA9-201ENST00000343483 PHF14O94880 888 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms