RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 PAXBP1Q9Y5B6 917 aa17.29■□□□□ 0.36
COL11A2-201ENST00000341947 EEF2P13639 858 aaKnown RBP17.29■□□□□ 0.36
COL11A2-201ENST00000341947 KRT2P35908 639 aa17.29■□□□□ 0.36
COL11A2-201ENST00000341947 GSTA5Q7RTV2 222 aa17.29■□□□□ 0.36
COL11A2-201ENST00000341947 MEIS3Q99687 375 aa17.29■□□□□ 0.36
COL11A2-201ENST00000341947 CCDC77Q9BR77 488 aa17.29■□□□□ 0.36
COL11A2-201ENST00000341947 RBM26Q5T8P6 1007 aaKnown RBP17.29■□□□□ 0.36
COL11A2-201ENST00000341947 DPH6Q7L8W6 267 aa17.29■□□□□ 0.36
COL11A2-201ENST00000341947 DDX23Q9BUQ8 820 aaKnown RBP17.29■□□□□ 0.36
COL11A2-201ENST00000341947 GIMAP6Q6P9H5 292 aa17.28■□□□□ 0.36
COL11A2-201ENST00000341947 PLCD3Q8N3E9 789 aa17.28■□□□□ 0.36
COL11A2-201ENST00000341947 MSANTD4Q8NCY6 345 aa17.28■□□□□ 0.36
COL11A2-201ENST00000341947 ANKRD2Q9GZV1 360 aa17.28■□□□□ 0.36
COL11A2-201ENST00000341947 TRIM75PA6NK02 468 aa17.28■□□□□ 0.36
COL11A2-201ENST00000341947 NSRP1Q9H0G5 558 aaKnown RBP17.28■□□□□ 0.36
COL11A2-201ENST00000341947 PPIP5K1Q6PFW1 1433 aa17.28■□□□□ 0.36
COL11A2-201ENST00000341947 TFCP2L1Q9NZI6 479 aa17.28■□□□□ 0.36
COL11A2-201ENST00000341947 IL2RBP14784 551 aa17.28■□□□□ 0.36
COL11A2-201ENST00000341947 TNNI2P48788 182 aa17.28■□□□□ 0.36
COL11A2-201ENST00000341947 DHX58Q96C10 678 aa17.28■□□□□ 0.36
COL11A2-201ENST00000341947 MCM9Q9NXL9 1143 aa17.28■□□□□ 0.36
COL11A2-201ENST00000341947 ATP2A1O14983 1001 aa17.27■□□□□ 0.36
COL11A2-201ENST00000341947 TACC1O75410 805 aa17.27■□□□□ 0.36
COL11A2-201ENST00000341947 ESYT1Q9BSJ8 1104 aa17.27■□□□□ 0.36
COL11A2-201ENST00000341947 DISP3Q9P2K9 1392 aa17.27■□□□□ 0.36
COL11A2-201ENST00000341947 ABCA10Q8WWZ4 1543 aa17.27■□□□□ 0.36
COL11A2-201ENST00000341947 CTAGE15A4D2H0 777 aa17.27■□□□□ 0.36
COL11A2-201ENST00000341947 TMEM110-MUSTN1A8MSY1 372 aa17.27■□□□□ 0.36
COL11A2-201ENST00000341947 NDC80O14777 642 aa17.27■□□□□ 0.36
COL11A2-201ENST00000341947 CTAGE8P0CG41 777 aa17.27■□□□□ 0.36
COL11A2-201ENST00000341947 HDAC1Q13547 482 aaPredicted RBP17.27■□□□□ 0.36
COL11A2-201ENST00000341947 CTAGE6Q86UF2 777 aa17.27■□□□□ 0.36
COL11A2-201ENST00000341947 CTAGE4Q8IX94 777 aa17.27■□□□□ 0.36
COL11A2-201ENST00000341947 ATP8B2P98198 1209 aa17.27■□□□□ 0.36
COL11A2-201ENST00000341947 ZSCAN23Q3MJ62 389 aa17.27■□□□□ 0.36
COL11A2-201ENST00000341947 BICDL2A1A5D9 508 aa17.27■□□□□ 0.35
COL11A2-201ENST00000341947 MARCKSP29966 332 aaPredicted RBP17.27■□□□□ 0.35
COL11A2-201ENST00000341947 PDE1AP54750 535 aa17.27■□□□□ 0.35
COL11A2-201ENST00000341947 ANO6Q4KMQ2 910 aa17.27■□□□□ 0.35
COL11A2-201ENST00000341947 NBPF14Q5TI25 921 aa17.27■□□□□ 0.35
COL11A2-201ENST00000341947 RNF113AO15541 343 aaKnown RBP17.27■□□□□ 0.35
COL11A2-201ENST00000341947 PAIP2Q9BPZ3 127 aaKnown RBP17.27■□□□□ 0.35
COL11A2-201ENST00000341947 GTPBP4Q9BZE4 634 aaKnown RBP17.27■□□□□ 0.35
COL11A2-201ENST00000341947 CALCOCO1Q9P1Z2 691 aa17.27■□□□□ 0.35
COL11A2-201ENST00000341947 CNPY2Q9Y2B0 182 aa17.26■□□□□ 0.35
COL11A2-201ENST00000341947 C11orf95C9JLR9 678 aaPredicted RBP17.26■□□□□ 0.35
COL11A2-201ENST00000341947 NMIQ13287 307 aaPredicted RBP17.26■□□□□ 0.35
COL11A2-201ENST00000341947 PUS7Q96PZ0 661 aaKnown RBP17.26■□□□□ 0.35
COL11A2-201ENST00000341947 STMN4Q9H169 189 aaPredicted RBP17.26■□□□□ 0.35
COL11A2-201ENST00000341947 LMOD1P29536 600 aaPredicted RBP17.26■□□□□ 0.35
COL11A2-201ENST00000341947 TAF12Q16514 161 aa17.26■□□□□ 0.35
COL11A2-201ENST00000341947 KLHL40Q2TBA0 621 aa17.26■□□□□ 0.35
COL11A2-201ENST00000341947 SPATA24Q86W54 205 aa17.26■□□□□ 0.35
COL11A2-201ENST00000341947 CCDC50Q8IVM0 306 aa17.26■□□□□ 0.35
COL11A2-201ENST00000341947 FBF1Q8TES7 1133 aa17.26■□□□□ 0.35
COL11A2-201ENST00000341947 BMS1Q14692 1282 aaKnown RBP17.26■□□□□ 0.35
COL11A2-201ENST00000341947 MAGEB6Q8N7X4 407 aa17.26■□□□□ 0.35
COL11A2-201ENST00000341947 MXRA7P84157 204 aa17.26■□□□□ 0.35
COL11A2-201ENST00000341947 HS2ST1Q7LGA3 356 aa17.26■□□□□ 0.35
COL11A2-201ENST00000341947 GRIN2AQ12879 1464 aa17.25■□□□□ 0.35
COL11A2-201ENST00000341947 GTF2F1P35269 517 aaKnown RBP eCLIP17.25■□□□□ 0.35
COL11A2-201ENST00000341947 WDR7Q9Y4E6 1490 aa17.25■□□□□ 0.35
COL11A2-201ENST00000341947 TCEANC2Q96MN5 208 aa17.25■□□□□ 0.35
COL11A2-201ENST00000341947 CEP83Q9Y592 693 aa17.25■□□□□ 0.35
COL11A2-201ENST00000341947 RTL1A6NKG5 1358 aa17.25■□□□□ 0.35
COL11A2-201ENST00000341947 SBNO2Q9Y2G9 1366 aa17.25■□□□□ 0.35
COL11A2-201ENST00000341947 IRS4O14654 1257 aaPredicted RBP17.25■□□□□ 0.35
COL11A2-201ENST00000341947 RIMBP2O15034 1052 aa17.25■□□□□ 0.35
COL11A2-201ENST00000341947 LDHBP07195 334 aaKnown RBP17.25■□□□□ 0.35
COL11A2-201ENST00000341947 HCLS1P14317 486 aaPredicted RBP17.25■□□□□ 0.35
COL11A2-201ENST00000341947 HSP90AA4PQ58FG1 418 aa17.25■□□□□ 0.35
COL11A2-201ENST00000341947 TBC1D32Q96NH3 1257 aa17.25■□□□□ 0.35
COL11A2-201ENST00000341947 SERPINA10Q9UK55 444 aa17.25■□□□□ 0.35
COL11A2-201ENST00000341947 APBB1IPQ7Z5R6 666 aaPredicted RBP17.25■□□□□ 0.35
COL11A2-201ENST00000341947 NSFL1CQ9UNZ2 370 aaKnown RBP17.25■□□□□ 0.35
COL11A2-201ENST00000341947 GNA11P29992 359 aa17.25■□□□□ 0.35
COL11A2-201ENST00000341947 RBM17Q96I25 401 aaKnown RBP17.24■□□□□ 0.35
COL11A2-201ENST00000341947 NAP1L4Q99733 375 aaKnown RBP17.24■□□□□ 0.35
COL11A2-201ENST00000341947 IGHDP01880 384 aa17.24■□□□□ 0.35
COL11A2-201ENST00000341947 KRT83P78385 493 aa17.24■□□□□ 0.35
COL11A2-201ENST00000341947 CCDC63Q8NA47 563 aa17.24■□□□□ 0.35
COL11A2-201ENST00000341947 ZBTB21Q9ULJ3 1066 aa17.24■□□□□ 0.35
COL11A2-201ENST00000341947 PTGS1P23219 599 aa17.24■□□□□ 0.35
COL11A2-201ENST00000341947 ARID5AQ03989 594 aa17.24■□□□□ 0.35
COL11A2-201ENST00000341947 ANKRD44Q8N8A2 993 aa17.24■□□□□ 0.35
COL11A2-201ENST00000341947 AOPEPQ8N6M6 819 aa17.24■□□□□ 0.35
COL11A2-201ENST00000341947 MIGA1Q8NAN2 632 aa17.24■□□□□ 0.35
COL11A2-201ENST00000341947 NEK11Q8NG66 645 aa17.23■□□□□ 0.35
COL11A2-201ENST00000341947 RNF216Q9NWF9 866 aaPredicted RBP17.23■□□□□ 0.35
COL11A2-201ENST00000341947 TTC41PQ6P2S7 1318 aa17.23■□□□□ 0.35
COL11A2-201ENST00000341947 SH2D4AQ9H788 454 aa17.23■□□□□ 0.35
COL11A2-201ENST00000341947 PRDM10Q9NQV6 1147 aa17.23■□□□□ 0.35
COL11A2-201ENST00000341947 SPTLC2O15270 562 aa17.23■□□□□ 0.35
COL11A2-201ENST00000341947 PLCB3Q01970 1234 aa17.23■□□□□ 0.35
COL11A2-201ENST00000341947 MRPL50Q8N5N7 158 aaKnown RBP17.23■□□□□ 0.35
COL11A2-201ENST00000341947 KDM5BQ9UGL1 1544 aa17.23■□□□□ 0.35
COL11A2-201ENST00000341947 CCDC117Q8IWD4 279 aaPredicted RBP17.23■□□□□ 0.35
COL11A2-201ENST00000341947 MCM7P33993 719 aa17.22■□□□□ 0.35
COL11A2-201ENST00000341947 RBM28Q9NW13 759 aaKnown RBP17.22■□□□□ 0.35
COL11A2-201ENST00000341947 BACH1O14867 736 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms