RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 VGLL2Q8N8G2 317 aa16.37■□□□□ 0.21
TUBD1-202ENST00000340993 CHMP4BQ9H444 224 aaKnown RBP16.37■□□□□ 0.21
TUBD1-202ENST00000340993 IL15P40933 162 aaPredicted RBP16.36■□□□□ 0.21
TUBD1-202ENST00000340993 ZNF784Q8NCA9 323 aaPredicted RBP16.36■□□□□ 0.21
TUBD1-202ENST00000340993 MXD3Q9BW11 206 aa16.36■□□□□ 0.21
TUBD1-202ENST00000340993 ZNRF3Q9ULT6 936 aa16.36■□□□□ 0.21
TUBD1-202ENST00000340993 MED23Q9ULK4 1368 aa16.36■□□□□ 0.21
TUBD1-202ENST00000340993 CIAO1O76071 339 aa16.36■□□□□ 0.21
TUBD1-202ENST00000340993 ADORA1P30542 326 aa16.36■□□□□ 0.21
TUBD1-202ENST00000340993 ATP2B3Q16720 1220 aa16.36■□□□□ 0.21
TUBD1-202ENST00000340993 NMRK2Q9NPI5 230 aa16.36■□□□□ 0.21
TUBD1-202ENST00000340993 ZBTB12Q9Y330 459 aaPredicted RBP16.36■□□□□ 0.21
TUBD1-202ENST00000340993 TIMM10P62072 90 aa16.35■□□□□ 0.21
TUBD1-202ENST00000340993 PUM3Q15397 648 aaKnown RBP16.35■□□□□ 0.21
TUBD1-202ENST00000340993 VPS37DQ86XT2 251 aa16.35■□□□□ 0.21
TUBD1-202ENST00000340993 NEUROD6Q96NK8 337 aa16.35■□□□□ 0.21
TUBD1-202ENST00000340993 MYH13Q9UKX3 1938 aa16.34■□□□□ 0.21
TUBD1-202ENST00000340993 FZD9O00144 591 aa16.34■□□□□ 0.21
TUBD1-202ENST00000340993 PSMD14O00487 310 aa16.34■□□□□ 0.21
TUBD1-202ENST00000340993 SASH1O94885 1247 aa16.34■□□□□ 0.21
TUBD1-202ENST00000340993 CENPBP07199 599 aaPredicted RBP16.34■□□□□ 0.21
TUBD1-202ENST00000340993 BCAMP50895 628 aa16.34■□□□□ 0.21
TUBD1-202ENST00000340993 CXCL9Q07325 125 aa16.34■□□□□ 0.21
TUBD1-202ENST00000340993 DPY19L2Q6NUT2 758 aa16.34■□□□□ 0.21
TUBD1-202ENST00000340993 RRAGCQ9HB90 399 aa16.34■□□□□ 0.21
TUBD1-202ENST00000340993 GPBP1L1Q9HC44 474 aaPredicted RBP16.34■□□□□ 0.21
TUBD1-202ENST00000340993 IL1RAPL2Q9NP60 686 aa16.34■□□□□ 0.21
TUBD1-202ENST00000340993 HMMRO75330 724 aa16.33■□□□□ 0.21
TUBD1-202ENST00000340993 SLC5A1P13866 664 aa16.33■□□□□ 0.21
TUBD1-202ENST00000340993 UBE4AQ14139 1066 aa16.33■□□□□ 0.21
TUBD1-202ENST00000340993 RPAP2Q8IXW5 612 aaPredicted RBP16.33■□□□□ 0.21
TUBD1-202ENST00000340993 SHTN1A0MZ66 631 aa16.33■□□□□ 0.2
TUBD1-202ENST00000340993 GLTPD2A6NH11 291 aa16.33■□□□□ 0.2
TUBD1-202ENST00000340993 FRAT2O75474 233 aaPredicted RBP16.33■□□□□ 0.2
TUBD1-202ENST00000340993 CHAF1AQ13111 956 aaPredicted RBP16.33■□□□□ 0.2
TUBD1-202ENST00000340993 CIAPIN1Q6FI81 312 aa16.33■□□□□ 0.2
TUBD1-202ENST00000340993 ZNF804AQ7Z570 1209 aa16.33■□□□□ 0.2
TUBD1-202ENST00000340993 A0A1B0GUL7 405 aa16.32■□□□□ 0.2
TUBD1-202ENST00000340993 SMARCA5O60264 1052 aaPredicted RBP16.32■□□□□ 0.2
TUBD1-202ENST00000340993 IFIT1P09914 478 aaKnown RBP16.32■□□□□ 0.2
TUBD1-202ENST00000340993 FAM84BQ96KN1 310 aaPredicted RBP16.32■□□□□ 0.2
TUBD1-202ENST00000340993 IRS2Q9Y4H2 1338 aa16.32■□□□□ 0.2
TUBD1-202ENST00000340993 GTF2IP78347 998 aa16.31■□□□□ 0.2
TUBD1-202ENST00000340993 CCDC8Q9H0W5 538 aaPredicted RBP16.31■□□□□ 0.2
TUBD1-202ENST00000340993 CD209Q9NNX6 404 aa16.31■□□□□ 0.2
TUBD1-202ENST00000340993 FGFR2P21802 821 aa16.31■□□□□ 0.2
TUBD1-202ENST00000340993 HIBADHP31937 336 aaKnown RBP16.31■□□□□ 0.2
TUBD1-202ENST00000340993 GMPSP49915 693 aaPredicted RBP16.31■□□□□ 0.2
TUBD1-202ENST00000340993 LPIN2Q92539 896 aa16.31■□□□□ 0.2
TUBD1-202ENST00000340993 COA1Q9GZY4 146 aa16.31■□□□□ 0.2
TUBD1-202ENST00000340993 VPS33BQ9H267 617 aa16.31■□□□□ 0.2
TUBD1-202ENST00000340993 TLR7Q9NYK1 1049 aaKnown RBP16.31■□□□□ 0.2
TUBD1-202ENST00000340993 KDM2BQ8NHM5 1336 aa16.31■□□□□ 0.2
TUBD1-202ENST00000340993 ZNF609O15014 1411 aa16.31■□□□□ 0.2
TUBD1-202ENST00000340993 F8W031 263 aaPredicted RBP16.3■□□□□ 0.2
TUBD1-202ENST00000340993 PHKA1P46020 1223 aa16.3■□□□□ 0.2
TUBD1-202ENST00000340993 CAVIN4Q5BKX8 364 aa16.3■□□□□ 0.2
TUBD1-202ENST00000340993 XAGE2Q96GT9 111 aa16.3■□□□□ 0.2
TUBD1-202ENST00000340993 FBXO3Q9UK99 471 aa16.3■□□□□ 0.2
TUBD1-202ENST00000340993 PSME4Q14997 1843 aa16.29■□□□□ 0.2
TUBD1-202ENST00000340993 ARAP2Q8WZ64 1704 aa16.29■□□□□ 0.2
TUBD1-202ENST00000340993 GORABQ5T7V8 394 aa16.29■□□□□ 0.2
TUBD1-202ENST00000340993 GPC2Q8N158 579 aa16.29■□□□□ 0.2
TUBD1-202ENST00000340993 NOP58Q9Y2X3 529 aaKnown RBP16.29■□□□□ 0.2
TUBD1-202ENST00000340993 ZC3H4Q9UPT8 1303 aaKnown RBP16.28■□□□□ 0.2
TUBD1-202ENST00000340993 EAPPQ56P03 285 aaPredicted RBP16.28■□□□□ 0.2
TUBD1-202ENST00000340993 TNNI3KQ59H18 835 aa16.28■□□□□ 0.2
TUBD1-202ENST00000340993 TTLL5Q6EMB2 1281 aa16.28■□□□□ 0.2
TUBD1-202ENST00000340993 AACSQ86V21 672 aa16.28■□□□□ 0.2
TUBD1-202ENST00000340993 RHPN1Q8TCX5 695 aa16.28■□□□□ 0.2
TUBD1-202ENST00000340993 FPGT-TNNI3KV9GXZ4 949 aa16.28■□□□□ 0.2
TUBD1-202ENST00000340993 ZNF646O15015 1829 aaPredicted RBP16.28■□□□□ 0.2
TUBD1-202ENST00000340993 USP17L3A6NCW0 530 aa16.28■□□□□ 0.2
TUBD1-202ENST00000340993 USP17L4A6NCW7 530 aa16.28■□□□□ 0.2
TUBD1-202ENST00000340993 EPS15P42566 896 aa16.28■□□□□ 0.2
TUBD1-202ENST00000340993 TNIP1Q15025 636 aa16.28■□□□□ 0.2
TUBD1-202ENST00000340993 RBM26Q5T8P6 1007 aaKnown RBP16.28■□□□□ 0.2
TUBD1-202ENST00000340993 USP17L1Q7RTZ2 530 aa16.28■□□□□ 0.2
TUBD1-202ENST00000340993 DBNDD2Q9BQY9 259 aa16.28■□□□□ 0.2
TUBD1-202ENST00000340993 AKAP2Q9Y2D5 859 aa16.28■□□□□ 0.2
TUBD1-202ENST00000340993 SCNN1DP51172 638 aa16.27■□□□□ 0.2
TUBD1-202ENST00000340993 PODNQ7Z5L7 613 aa16.27■□□□□ 0.2
TUBD1-202ENST00000340993 POTECB2RU33 542 aa16.26■□□□□ 0.19
TUBD1-202ENST00000340993 POTEIP0CG38 1075 aa16.26■□□□□ 0.19
TUBD1-202ENST00000340993 POTEJP0CG39 1038 aa16.26■□□□□ 0.19
TUBD1-202ENST00000340993 LMOD1P29536 600 aaPredicted RBP16.26■□□□□ 0.19
TUBD1-202ENST00000340993 CCDC102BQ68D86 513 aa16.26■□□□□ 0.19
TUBD1-202ENST00000340993 PI16Q6UXB8 463 aa16.26■□□□□ 0.19
TUBD1-202ENST00000340993 FBXO33Q7Z6M2 555 aa16.26■□□□□ 0.19
TUBD1-202ENST00000340993 KIAA0825Q8IV33 1275 aa16.26■□□□□ 0.19
TUBD1-202ENST00000340993 EAF2Q96CJ1 260 aaPredicted RBP16.26■□□□□ 0.19
TUBD1-202ENST00000340993 WDR90Q96KV7 1748 aa16.26■□□□□ 0.19
TUBD1-202ENST00000340993 COL1A1P02452 1464 aaPredicted RBP16.26■□□□□ 0.19
TUBD1-202ENST00000340993 B4GALNT3Q6L9W6 998 aa16.26■□□□□ 0.19
TUBD1-202ENST00000340993 RSBN1LQ6PCB5 846 aaPredicted RBP16.26■□□□□ 0.19
TUBD1-202ENST00000340993 C15orf52Q6ZUT6 534 aaKnown RBP16.26■□□□□ 0.19
TUBD1-202ENST00000340993 ERC1Q8IUD2 1116 aa16.26■□□□□ 0.19
TUBD1-202ENST00000340993 MICALL2Q8IY33 904 aa16.26■□□□□ 0.19
TUBD1-202ENST00000340993 NDUFB9Q9Y6M9 179 aa16.26■□□□□ 0.19
TUBD1-202ENST00000340993 IGHDP01880 384 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms