RNA–Protein interactions for RNA: ENST00000340384.4

TUBB4B-201, Transcript of tubulin beta 4B class IVb, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB4B, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-201ENST00000340384 TAF7LQ5H9L4 462 aa18.34■□□□□ 0.53
TUBB4B-201ENST00000340384 PRPF40BQ6NWY9 871 aaKnown RBP18.34■□□□□ 0.53
TUBB4B-201ENST00000340384 VGLL2Q8N8G2 317 aa18.34■□□□□ 0.53
TUBB4B-201ENST00000340384 WWC3Q9ULE0 1092 aa18.34■□□□□ 0.53
TUBB4B-201ENST00000340384 SLX4Q8IY92 1834 aa18.34■□□□□ 0.53
TUBB4B-201ENST00000340384 SGSM2O43147 1006 aa18.34■□□□□ 0.53
TUBB4B-201ENST00000340384 HELBQ8NG08 1087 aaPredicted RBP18.34■□□□□ 0.53
TUBB4B-201ENST00000340384 MPHOSPH8Q99549 860 aa18.34■□□□□ 0.53
TUBB4B-201ENST00000340384 FBXO3Q9UK99 471 aa18.34■□□□□ 0.53
TUBB4B-201ENST00000340384 SNAP23O00161 211 aa18.33■□□□□ 0.52
TUBB4B-201ENST00000340384 MAP4K4O95819 1239 aaPredicted RBP18.33■□□□□ 0.52
TUBB4B-201ENST00000340384 IL15P40933 162 aaPredicted RBP18.33■□□□□ 0.52
TUBB4B-201ENST00000340384 TFCP2Q12800 502 aa18.33■□□□□ 0.52
TUBB4B-201ENST00000340384 SPRYD3Q8NCJ5 442 aa18.33■□□□□ 0.52
TUBB4B-201ENST00000340384 CNKSR1Q969H4 720 aa18.33■□□□□ 0.52
TUBB4B-201ENST00000340384 IL17RAQ96F46 866 aa18.33■□□□□ 0.52
TUBB4B-201ENST00000340384 GPR108Q9NPR9 543 aa18.33■□□□□ 0.52
TUBB4B-201ENST00000340384 CNNM1Q9NRU3 951 aa18.33■□□□□ 0.52
TUBB4B-201ENST00000340384 SPEF2Q9C093 1822 aa18.32■□□□□ 0.52
TUBB4B-201ENST00000340384 PPEF1O14829 653 aaPredicted RBP18.32■□□□□ 0.52
TUBB4B-201ENST00000340384 TAF5LO75529 589 aa18.32■□□□□ 0.52
TUBB4B-201ENST00000340384 CHRNDQ07001 517 aa18.32■□□□□ 0.52
TUBB4B-201ENST00000340384 TNNI3KQ59H18 835 aa18.32■□□□□ 0.52
TUBB4B-201ENST00000340384 TTLL6Q8N841 843 aa18.32■□□□□ 0.52
TUBB4B-201ENST00000340384 CCDC8Q9H0W5 538 aaPredicted RBP18.32■□□□□ 0.52
TUBB4B-201ENST00000340384 ATP6V0A2Q9Y487 856 aa18.32■□□□□ 0.52
TUBB4B-201ENST00000340384 FPGT-TNNI3KV9GXZ4 949 aa18.32■□□□□ 0.52
TUBB4B-201ENST00000340384 RAD50Q92878 1312 aa18.32■□□□□ 0.52
TUBB4B-201ENST00000340384 SP8Q8IXZ3 490 aa18.31■□□□□ 0.52
TUBB4B-201ENST00000340384 PIM2Q9P1W9 311 aa18.31■□□□□ 0.52
TUBB4B-201ENST00000340384 BRCA1P38398 1863 aaKnown RBP18.31■□□□□ 0.52
TUBB4B-201ENST00000340384 SNED1Q8TER0 1413 aa18.31■□□□□ 0.52
TUBB4B-201ENST00000340384 RFX7Q2KHR2 1363 aa18.31■□□□□ 0.52
TUBB4B-201ENST00000340384 ATP5JP18859 108 aa18.3■□□□□ 0.52
TUBB4B-201ENST00000340384 GPSM2P81274 684 aa18.3■□□□□ 0.52
TUBB4B-201ENST00000340384 FRAT2O75474 233 aaPredicted RBP18.29■□□□□ 0.52
TUBB4B-201ENST00000340384 PDE8BO95263 885 aa18.29■□□□□ 0.52
TUBB4B-201ENST00000340384 HSPA4P34932 840 aa18.29■□□□□ 0.52
TUBB4B-201ENST00000340384 DDIT3P35638 169 aa18.29■□□□□ 0.52
TUBB4B-201ENST00000340384 METTL24Q5JXM2 366 aa18.29■□□□□ 0.52
TUBB4B-201ENST00000340384 TICAM2Q86XR7 235 aa18.29■□□□□ 0.52
TUBB4B-201ENST00000340384 ZNF219Q9P2Y4 722 aaPredicted RBP18.29■□□□□ 0.52
TUBB4B-201ENST00000340384 MROH5Q6ZUA9 1318 aa18.29■□□□□ 0.52
TUBB4B-201ENST00000340384 LRRC37AA6NMS7 1700 aa18.29■□□□□ 0.52
TUBB4B-201ENST00000340384 UTRNP46939 3433 aa18.28■□□□□ 0.52
TUBB4B-201ENST00000340384 C21orf2O43822 256 aa18.28■□□□□ 0.52
TUBB4B-201ENST00000340384 CD2BP2O95400 341 aaKnown RBP18.28■□□□□ 0.52
TUBB4B-201ENST00000340384 FGFR2P21802 821 aa18.28■□□□□ 0.52
TUBB4B-201ENST00000340384 CWC27Q6UX04 472 aaKnown RBP18.28■□□□□ 0.52
TUBB4B-201ENST00000340384 CACNA1SQ13698 1873 aa18.28■□□□□ 0.52
TUBB4B-201ENST00000340384 TIMM10P62072 90 aa18.27■□□□□ 0.52
TUBB4B-201ENST00000340384 DALRD3Q5D0E6 543 aaKnown RBP18.27■□□□□ 0.52
TUBB4B-201ENST00000340384 TMC4Q7Z404 712 aa18.27■□□□□ 0.52
TUBB4B-201ENST00000340384 CWC22Q9HCG8 908 aaKnown RBP18.27■□□□□ 0.52
TUBB4B-201ENST00000340384 CEP126Q9P2H0 1117 aa18.27■□□□□ 0.52
TUBB4B-201ENST00000340384 LTBP1Q14766 1721 aa18.27■□□□□ 0.51
TUBB4B-201ENST00000340384 A0A1B0GUL6 1792 aa18.27■□□□□ 0.51
TUBB4B-201ENST00000340384 FSD1Q9BTV5 496 aa18.27■□□□□ 0.51
TUBB4B-201ENST00000340384 LSG1Q9H089 658 aaKnown RBP18.27■□□□□ 0.51
TUBB4B-201ENST00000340384 TLR7Q9NYK1 1049 aaKnown RBP18.27■□□□□ 0.51
TUBB4B-201ENST00000340384 PODXL2Q9NZ53 605 aa18.27■□□□□ 0.51
TUBB4B-201ENST00000340384 POLLQ9UGP5 575 aa18.27■□□□□ 0.51
TUBB4B-201ENST00000340384 IRS2Q9Y4H2 1338 aa18.26■□□□□ 0.51
TUBB4B-201ENST00000340384 KLRK1P26718 216 aa18.26■□□□□ 0.51
TUBB4B-201ENST00000340384 NEK4P51957 841 aa18.26■□□□□ 0.51
TUBB4B-201ENST00000340384 BOLA2Q9H3K6 86 aa18.26■□□□□ 0.51
TUBB4B-201ENST00000340384 DBNLQ9UJU6 430 aaKnown RBP18.26■□□□□ 0.51
TUBB4B-201ENST00000340384 NSFL1CQ9UNZ2 370 aaKnown RBP18.26■□□□□ 0.51
TUBB4B-201ENST00000340384 DUOX1Q9NRD9 1551 aa18.25■□□□□ 0.51
TUBB4B-201ENST00000340384 PTMSP20962 102 aa18.25■□□□□ 0.51
TUBB4B-201ENST00000340384 GPR101Q96P66 508 aaPredicted RBP18.25■□□□□ 0.51
TUBB4B-201ENST00000340384 ANKRD2Q9GZV1 360 aa18.25■□□□□ 0.51
TUBB4B-201ENST00000340384 BCS1LQ9Y276 419 aa18.25■□□□□ 0.51
TUBB4B-201ENST00000340384 AKAP2Q9Y2D5 859 aa18.25■□□□□ 0.51
TUBB4B-201ENST00000340384 ADORA1P30542 326 aa18.24■□□□□ 0.51
TUBB4B-201ENST00000340384 TXNRD3Q86VQ6 643 aa18.24■□□□□ 0.51
TUBB4B-201ENST00000340384 TBC1D16Q8TBP0 767 aa18.24■□□□□ 0.51
TUBB4B-201ENST00000340384 GBP4Q96PP9 640 aa18.24■□□□□ 0.51
TUBB4B-201ENST00000340384 SNRKQ9NRH2 765 aa18.24■□□□□ 0.51
TUBB4B-201ENST00000340384 XDHP47989 1333 aa18.24■□□□□ 0.51
TUBB4B-201ENST00000340384 ZNF609O15014 1411 aa18.24■□□□□ 0.51
TUBB4B-201ENST00000340384 A0A1B0GUL7 405 aa18.23■□□□□ 0.51
TUBB4B-201ENST00000340384 DDX11L8A8MPP1 907 aa18.23■□□□□ 0.51
TUBB4B-201ENST00000340384 ANKIB1Q9P2G1 1089 aa18.23■□□□□ 0.51
TUBB4B-201ENST00000340384 NUCB2P80303 420 aa18.23■□□□□ 0.51
TUBB4B-201ENST00000340384 UBE4AQ14139 1066 aa18.23■□□□□ 0.51
TUBB4B-201ENST00000340384 RAB3GAP1Q15042 981 aa18.23■□□□□ 0.51
TUBB4B-201ENST00000340384 PUM3Q15397 648 aaKnown RBP18.23■□□□□ 0.51
TUBB4B-201ENST00000340384 ATP2B3Q16720 1220 aa18.23■□□□□ 0.51
TUBB4B-201ENST00000340384 MPNDQ8N594 471 aa18.23■□□□□ 0.51
TUBB4B-201ENST00000340384 HAUS7Q99871 368 aa18.23■□□□□ 0.51
TUBB4B-201ENST00000340384 ZNF804BA4D1E1 1349 aa18.23■□□□□ 0.51
TUBB4B-201ENST00000340384 YBX3P16989 372 aaKnown RBP eCLIP18.22■□□□□ 0.51
TUBB4B-201ENST00000340384 DBNDD2Q9BQY9 259 aa18.22■□□□□ 0.51
TUBB4B-201ENST00000340384 RTFDC1Q9BY42 306 aaPredicted RBP18.22■□□□□ 0.51
TUBB4B-201ENST00000340384 PALD1Q9ULE6 856 aa18.22■□□□□ 0.51
TUBB4B-201ENST00000340384 CCDC171Q6TFL3 1326 aa18.22■□□□□ 0.51
TUBB4B-201ENST00000340384 MCM4P33991 863 aa18.21■□□□□ 0.51
TUBB4B-201ENST00000340384 NMIQ13287 307 aaPredicted RBP18.21■□□□□ 0.51
TUBB4B-201ENST00000340384 CC2D2BQ6DHV5 1058 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms