RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 RAB11FIP4Q86YS3 637 aa14.49□□□□□ -0.09
USP47-202ENST00000339865 HVCN1Q96D96 273 aa14.49□□□□□ -0.09
USP47-202ENST00000339865 PLS1Q14651 629 aa14.49□□□□□ -0.09
USP47-202ENST00000339865 FAM212AQ96EL1 285 aa14.49□□□□□ -0.09
USP47-202ENST00000339865 RMND1Q9NWS8 449 aa14.49□□□□□ -0.09
USP47-202ENST00000339865 KIF1BPQ96EK5 621 aa14.48□□□□□ -0.09
USP47-202ENST00000339865 VCX3AQ9NNX9 186 aa14.48□□□□□ -0.09
USP47-202ENST00000339865 GLRX3O76003 335 aaKnown RBP14.48□□□□□ -0.09
USP47-202ENST00000339865 KRT83P78385 493 aa14.48□□□□□ -0.09
USP47-202ENST00000339865 CAVIN4Q5BKX8 364 aa14.48□□□□□ -0.09
USP47-202ENST00000339865 ZBTB24O43167 697 aaPredicted RBP14.48□□□□□ -0.09
USP47-202ENST00000339865 NOP9Q86U38 636 aaKnown RBP14.48□□□□□ -0.09
USP47-202ENST00000339865 AGTPBP1Q9UPW5 1226 aa14.48□□□□□ -0.09
USP47-202ENST00000339865 E7EVH7 732 aa14.48□□□□□ -0.09
USP47-202ENST00000339865 ARHGAP24Q8N264 748 aa14.48□□□□□ -0.09
USP47-202ENST00000339865 NGLY1Q96IV0 654 aa14.48□□□□□ -0.09
USP47-202ENST00000339865 BAIAP2L1Q9UHR4 511 aa14.48□□□□□ -0.09
USP47-202ENST00000339865 BTBD11A6QL63 1104 aa14.48□□□□□ -0.09
USP47-202ENST00000339865 AFG3L2Q9Y4W6 797 aa14.48□□□□□ -0.09
USP47-202ENST00000339865 FAM69CQ0P6D2 419 aa14.47□□□□□ -0.09
USP47-202ENST00000339865 RRAGBQ5VZM2 374 aa14.47□□□□□ -0.09
USP47-202ENST00000339865 RPAINQ86UA6 219 aa14.47□□□□□ -0.09
USP47-202ENST00000339865 MICU3Q86XE3 530 aa14.47□□□□□ -0.09
USP47-202ENST00000339865 VSIG1Q86XK7 387 aa14.47□□□□□ -0.09
USP47-202ENST00000339865 FAF1Q9UNN5 650 aaPredicted RBP14.47□□□□□ -0.09
USP47-202ENST00000339865 RPGRIP1LQ68CZ1 1315 aa14.47□□□□□ -0.09
USP47-202ENST00000339865 WDR46O15213 610 aaKnown RBP14.47□□□□□ -0.09
USP47-202ENST00000339865 CALCOCO2Q13137 446 aa14.47□□□□□ -0.09
USP47-202ENST00000339865 PPP4R4Q6NUP7 873 aa14.47□□□□□ -0.09
USP47-202ENST00000339865 GPR161Q8N6U8 529 aaKnown RBP14.47□□□□□ -0.09
USP47-202ENST00000339865 CCDC7Q96M83 1385 aa14.47□□□□□ -0.09
USP47-202ENST00000339865 GOLGA6CA6NDK9 693 aa14.47□□□□□ -0.09
USP47-202ENST00000339865 GOLGA6DP0CG33 693 aa14.47□□□□□ -0.09
USP47-202ENST00000339865 CLCN1P35523 988 aa14.47□□□□□ -0.09
USP47-202ENST00000339865 SULT6B1Q6IMI4 303 aa14.47□□□□□ -0.09
USP47-202ENST00000339865 AOPEPQ8N6M6 819 aa14.47□□□□□ -0.09
USP47-202ENST00000339865 CCDC42Q96M95 316 aa14.47□□□□□ -0.09
USP47-202ENST00000339865 GOLGA6AQ9NYA3 693 aa14.47□□□□□ -0.09
USP47-202ENST00000339865 ITIH3Q06033 890 aa14.47□□□□□ -0.09
USP47-202ENST00000339865 RILPQ96NA2 401 aa14.46□□□□□ -0.09
USP47-202ENST00000339865 SYF2O95926 243 aaKnown RBP14.46□□□□□ -0.09
USP47-202ENST00000339865 IFIT1P09914 478 aaKnown RBP14.46□□□□□ -0.09
USP47-202ENST00000339865 LMOD1P29536 600 aaPredicted RBP14.46□□□□□ -0.09
USP47-202ENST00000339865 USP37Q86T82 979 aa14.46□□□□□ -0.09
USP47-202ENST00000339865 IMPG2Q9BZV3 1241 aa14.46□□□□□ -0.09
USP47-202ENST00000339865 UTP11Q9Y3A2 253 aaKnown RBP14.46□□□□□ -0.09
USP47-202ENST00000339865 PPP2R5DQ14738 602 aa14.46□□□□□ -0.09
USP47-202ENST00000339865 TMEM67Q5HYA8 995 aa14.46□□□□□ -0.09
USP47-202ENST00000339865 SYT10Q6XYQ8 523 aa14.46□□□□□ -0.09
USP47-202ENST00000339865 TBC1D2Q9BYX2 928 aa14.46□□□□□ -0.1
USP47-202ENST00000339865 FRMD3A2A2Y4 597 aa14.45□□□□□ -0.1
USP47-202ENST00000339865 CCDC26Q8TAB7 109 aa14.45□□□□□ -0.1
USP47-202ENST00000339865 SLC26A6Q9BXS9 759 aa14.45□□□□□ -0.1
USP47-202ENST00000339865 PROCA1Q8NCQ7 364 aaPredicted RBP14.45□□□□□ -0.1
USP47-202ENST00000339865 TATP17735 454 aaPredicted RBP14.45□□□□□ -0.1
USP47-202ENST00000339865 UBXN1Q04323 297 aa14.45□□□□□ -0.1
USP47-202ENST00000339865 SMARCC2Q8TAQ2 1214 aa14.45□□□□□ -0.1
USP47-202ENST00000339865 ZBTB12Q9Y330 459 aaPredicted RBP14.45□□□□□ -0.1
USP47-202ENST00000339865 MX1P20591 662 aa14.45□□□□□ -0.1
USP47-202ENST00000339865 TRPC3Q13507 836 aa14.45□□□□□ -0.1
USP47-202ENST00000339865 SMAP1Q8IYB5 467 aaPredicted RBP14.45□□□□□ -0.1
USP47-202ENST00000339865 PDZD8Q8NEN9 1154 aa14.45□□□□□ -0.1
USP47-202ENST00000339865 TRIM4Q9C037 500 aa14.45□□□□□ -0.1
USP47-202ENST00000339865 CACYBPQ9HB71 228 aaKnown RBP14.45□□□□□ -0.1
USP47-202ENST00000339865 ANLNQ9NQW6 1124 aa14.45□□□□□ -0.1
USP47-202ENST00000339865 RNASE9P60153 205 aaKnown RBP14.45□□□□□ -0.1
USP47-202ENST00000339865 PPP2R3AQ06190 1150 aa14.45□□□□□ -0.1
USP47-202ENST00000339865 AKNAD1Q5T1N1 836 aa14.45□□□□□ -0.1
USP47-202ENST00000339865 AFAP1L2Q8N4X5 818 aa14.45□□□□□ -0.1
USP47-202ENST00000339865 NCAPGQ9BPX3 1015 aa14.45□□□□□ -0.1
USP47-202ENST00000339865 TSGA10Q9BZW7 698 aa14.45□□□□□ -0.1
USP47-202ENST00000339865 IARSP41252 1262 aaKnown RBP14.44□□□□□ -0.1
USP47-202ENST00000339865 MAP3K12Q12852 859 aa14.44□□□□□ -0.1
USP47-202ENST00000339865 KIFC2Q96AC6 838 aa14.44□□□□□ -0.1
USP47-202ENST00000339865 LRRC27Q9C0I9 530 aa14.44□□□□□ -0.1
USP47-202ENST00000339865 MCM7P33993 719 aa14.44□□□□□ -0.1
USP47-202ENST00000339865 DDX21Q9NR30 783 aaKnown RBP eCLIP14.44□□□□□ -0.1
USP47-202ENST00000339865 TRIM35Q9UPQ4 493 aa14.44□□□□□ -0.1
USP47-202ENST00000339865 RBBP5Q15291 538 aaKnown RBP14.44□□□□□ -0.1
USP47-202ENST00000339865 MYH10P35580 1976 aa14.44□□□□□ -0.1
USP47-202ENST00000339865 TNNC1P63316 161 aa14.44□□□□□ -0.1
USP47-202ENST00000339865 NEK11Q8NG66 645 aa14.44□□□□□ -0.1
USP47-202ENST00000339865 USP16Q9Y5T5 823 aa14.44□□□□□ -0.1
USP47-202ENST00000339865 SOGA1O94964 1423 aa14.44□□□□□ -0.1
USP47-202ENST00000339865 SESN3P58005 492 aa14.44□□□□□ -0.1
USP47-202ENST00000339865 CLSTN2Q9H4D0 955 aa14.44□□□□□ -0.1
USP47-202ENST00000339865 BAG2O95816 211 aa14.43□□□□□ -0.1
USP47-202ENST00000339865 KMT5BQ4FZB7 885 aa14.43□□□□□ -0.1
USP47-202ENST00000339865 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.43□□□□□ -0.1
USP47-202ENST00000339865 ARHGAP25P42331 645 aa14.43□□□□□ -0.1
USP47-202ENST00000339865 METAP2P50579 478 aaKnown RBP eCLIP14.43□□□□□ -0.1
USP47-202ENST00000339865 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.43□□□□□ -0.1
USP47-202ENST00000339865 TAOK1Q7L7X3 1001 aa14.43□□□□□ -0.1
USP47-202ENST00000339865 APOEP02649 317 aa14.43□□□□□ -0.1
USP47-202ENST00000339865 RBM26Q5T8P6 1007 aaKnown RBP14.43□□□□□ -0.1
USP47-202ENST00000339865 U2AF2P26368 475 aaKnown RBP eCLIP14.43□□□□□ -0.18e-8■■□□□ 12.3
USP47-202ENST00000339865 EVCP57679 992 aa14.43□□□□□ -0.1
USP47-202ENST00000339865 PSMA7O14818 248 aa14.43□□□□□ -0.1
USP47-202ENST00000339865 RPGRQ92834 1020 aaKnown RBP14.43□□□□□ -0.1
USP47-202ENST00000339865 SPG7Q9UQ90 795 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms