RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 GJB4Q9NTQ9 266 aa12.86□□□□□ -0.35
SEMA4D-201ENST00000339861 AKAP2Q9Y2D5 859 aa12.86□□□□□ -0.35
SEMA4D-201ENST00000339861 ARHGEF28Q8N1W1 1705 aaKnown RBP12.86□□□□□ -0.35
SEMA4D-201ENST00000339861 SPTLC2O15270 562 aa12.86□□□□□ -0.35
SEMA4D-201ENST00000339861 RNF113AO15541 343 aaKnown RBP12.86□□□□□ -0.35
SEMA4D-201ENST00000339861 RAD21O60216 631 aa12.86□□□□□ -0.35
SEMA4D-201ENST00000339861 IGKV5-2P06315 115 aa12.86□□□□□ -0.35
SEMA4D-201ENST00000339861 IL15P40933 162 aaPredicted RBP12.86□□□□□ -0.35
SEMA4D-201ENST00000339861 ARID5BQ14865 1188 aa12.86□□□□□ -0.35
SEMA4D-201ENST00000339861 KBTBD3Q8NAB2 608 aa12.86□□□□□ -0.35
SEMA4D-201ENST00000339861 CCDC94Q9BW85 323 aaPredicted RBP12.86□□□□□ -0.35
SEMA4D-201ENST00000339861 PUS3Q9BZE2 481 aaKnown RBP12.86□□□□□ -0.35
SEMA4D-201ENST00000339861 KDRP35968 1356 aa12.86□□□□□ -0.35
SEMA4D-201ENST00000339861 ADGRB2O60241 1585 aa12.86□□□□□ -0.35
SEMA4D-201ENST00000339861 TMEM67Q5HYA8 995 aa12.86□□□□□ -0.35
SEMA4D-201ENST00000339861 SYKP43405 635 aa12.85□□□□□ -0.35
SEMA4D-201ENST00000339861 UBXN4Q92575 508 aa12.85□□□□□ -0.35
SEMA4D-201ENST00000339861 RAI14Q9P0K7 980 aa12.85□□□□□ -0.35
SEMA4D-201ENST00000339861 POLR3GO15318 223 aaPredicted RBP12.85□□□□□ -0.35
SEMA4D-201ENST00000339861 IARSP41252 1262 aaKnown RBP12.85□□□□□ -0.35
SEMA4D-201ENST00000339861 ATP2B3Q16720 1220 aa12.85□□□□□ -0.35
SEMA4D-201ENST00000339861 PHKBQ93100 1093 aa12.85□□□□□ -0.35
SEMA4D-201ENST00000339861 TPM1P09493 284 aa12.85□□□□□ -0.35
SEMA4D-201ENST00000339861 TOP1P11387 765 aaKnown RBP12.85□□□□□ -0.35
SEMA4D-201ENST00000339861 ARGLU1Q9NWB6 273 aaPredicted RBP12.85□□□□□ -0.35
SEMA4D-201ENST00000339861 DNAI1Q9UI46 699 aa12.85□□□□□ -0.35
SEMA4D-201ENST00000339861 SLC12A7Q9Y666 1083 aa12.85□□□□□ -0.35
SEMA4D-201ENST00000339861 E7EWF7 191 aa12.85□□□□□ -0.35
SEMA4D-201ENST00000339861 ATP5JP18859 108 aa12.85□□□□□ -0.35
SEMA4D-201ENST00000339861 PI16Q6UXB8 463 aa12.85□□□□□ -0.35
SEMA4D-201ENST00000339861 UBAC1Q9BSL1 405 aa12.85□□□□□ -0.35
SEMA4D-201ENST00000339861 RPAP1Q9BWH6 1393 aaPredicted RBP12.84□□□□□ -0.35
SEMA4D-201ENST00000339861 SMTNL1A8MU46 457 aa12.84□□□□□ -0.35
SEMA4D-201ENST00000339861 ZSCAN25Q6NSZ9 544 aa12.84□□□□□ -0.35
SEMA4D-201ENST00000339861 SYT10Q6XYQ8 523 aa12.84□□□□□ -0.35
SEMA4D-201ENST00000339861 ZCRB1Q8TBF4 217 aaKnown RBP12.84□□□□□ -0.35
SEMA4D-201ENST00000339861 NAA30Q147X3 362 aaPredicted RBP12.84□□□□□ -0.35
SEMA4D-201ENST00000339861 TEX35Q5T0J7 233 aa12.84□□□□□ -0.35
SEMA4D-201ENST00000339861 C11orf57Q6ZUT1 292 aaPredicted RBP12.84□□□□□ -0.35
SEMA4D-201ENST00000339861 ADCY9O60503 1353 aa12.83□□□□□ -0.35
SEMA4D-201ENST00000339861 CDKL5O76039 1030 aa12.83□□□□□ -0.36
SEMA4D-201ENST00000339861 UBASH3AP57075 661 aa12.83□□□□□ -0.36
SEMA4D-201ENST00000339861 DCAF5Q96JK2 942 aa12.83□□□□□ -0.36
SEMA4D-201ENST00000339861 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.83□□□□□ -0.36
SEMA4D-201ENST00000339861 B4E1Z4 1266 aa12.83□□□□□ -0.36
SEMA4D-201ENST00000339861 EYA2O00167 538 aa12.83□□□□□ -0.36
SEMA4D-201ENST00000339861 ZAP70P43403 619 aa12.83□□□□□ -0.36
SEMA4D-201ENST00000339861 FAM160A1Q05DH4 1040 aa12.83□□□□□ -0.36
SEMA4D-201ENST00000339861 TOB2Q14106 344 aaPredicted RBP12.83□□□□□ -0.36
SEMA4D-201ENST00000339861 STARD3NLO95772 234 aa12.83□□□□□ -0.36
SEMA4D-201ENST00000339861 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.83□□□□□ -0.36
SEMA4D-201ENST00000339861 PLEKHG1Q9ULL1 1385 aa12.83□□□□□ -0.36
SEMA4D-201ENST00000339861 TSR1Q2NL82 804 aaKnown RBP12.82□□□□□ -0.36
SEMA4D-201ENST00000339861 ARHGEF25Q86VW2 580 aa12.82□□□□□ -0.36
SEMA4D-201ENST00000339861 MIGA1Q8NAN2 632 aa12.82□□□□□ -0.36
SEMA4D-201ENST00000339861 CACTINQ8WUQ7 758 aaKnown RBP12.82□□□□□ -0.36
SEMA4D-201ENST00000339861 NACAP1Q9BZK3 213 aa12.82□□□□□ -0.36
SEMA4D-201ENST00000339861 CGNQ9P2M7 1197 aaKnown RBP12.82□□□□□ -0.36
SEMA4D-201ENST00000339861 ANKRD18BA2A2Z9 1011 aa12.82□□□□□ -0.36
SEMA4D-201ENST00000339861 RANBP6O60518 1105 aaKnown RBP12.82□□□□□ -0.36
SEMA4D-201ENST00000339861 HSPD1P10809 573 aaKnown RBP12.82□□□□□ -0.36
SEMA4D-201ENST00000339861 AFMP43652 599 aa12.82□□□□□ -0.36
SEMA4D-201ENST00000339861 PTPN12Q05209 780 aaKnown RBP12.82□□□□□ -0.36
SEMA4D-201ENST00000339861 COL9A3Q14050 684 aaPredicted RBP12.82□□□□□ -0.36
SEMA4D-201ENST00000339861 XAGE2Q96GT9 111 aa12.82□□□□□ -0.36
SEMA4D-201ENST00000339861 ADORA1P30542 326 aa12.82□□□□□ -0.36
SEMA4D-201ENST00000339861 KIAA1524Q8TCG1 905 aa12.82□□□□□ -0.36
SEMA4D-201ENST00000339861 PLBD2Q8NHP8 589 aa12.82□□□□□ -0.36
SEMA4D-201ENST00000339861 ZBTB43O43298 467 aa12.81□□□□□ -0.36
SEMA4D-201ENST00000339861 PHKG2P15735 406 aa12.81□□□□□ -0.36
SEMA4D-201ENST00000339861 CMTR1Q8N1G2 835 aaKnown RBP12.81□□□□□ -0.36
SEMA4D-201ENST00000339861 PGBD1Q96JS3 809 aa12.81□□□□□ -0.36
SEMA4D-201ENST00000339861 ADD1P35611 737 aaKnown RBP12.81□□□□□ -0.36
SEMA4D-201ENST00000339861 TNNT3P45378 269 aaPredicted RBP12.81□□□□□ -0.36
SEMA4D-201ENST00000339861 TERF1P54274 439 aa12.81□□□□□ -0.36
SEMA4D-201ENST00000339861 STX17P56962 302 aa12.81□□□□□ -0.36
SEMA4D-201ENST00000339861 MARCH6O60337 910 aa12.81□□□□□ -0.36
SEMA4D-201ENST00000339861 XBP1P17861 261 aa12.81□□□□□ -0.36
SEMA4D-201ENST00000339861 PPFIBP1Q86W92 1011 aa12.81□□□□□ -0.36
SEMA4D-201ENST00000339861 KCNG4Q8TDN1 519 aa12.81□□□□□ -0.36
SEMA4D-201ENST00000339861 hCG_1642624A0A1W2PR95 340 aa12.8□□□□□ -0.36
SEMA4D-201ENST00000339861 GPAA1O43292 621 aa12.8□□□□□ -0.36
SEMA4D-201ENST00000339861 SSRP1Q08945 709 aaKnown RBP12.8□□□□□ -0.36
SEMA4D-201ENST00000339861 PAXBP1Q9Y5B6 917 aa12.8□□□□□ -0.36
SEMA4D-201ENST00000339861 OVOS2A0A0J9YW53 1432 aa12.8□□□□□ -0.36
SEMA4D-201ENST00000339861 OVOS2Q6IE36 1432 aa12.8□□□□□ -0.36
SEMA4D-201ENST00000339861 EPB41L2O43491 1005 aaKnown RBP12.8□□□□□ -0.36
SEMA4D-201ENST00000339861 HSPA2P54652 639 aa12.8□□□□□ -0.36
SEMA4D-201ENST00000339861 GNG11P61952 73 aa12.8□□□□□ -0.36
SEMA4D-201ENST00000339861 DHX8Q14562 1220 aaKnown RBP12.8□□□□□ -0.36
SEMA4D-201ENST00000339861 ELF2Q15723 593 aa12.8□□□□□ -0.36
SEMA4D-201ENST00000339861 CCDC102BQ68D86 513 aa12.8□□□□□ -0.36
SEMA4D-201ENST00000339861 CLIC4Q9Y696 253 aa12.8□□□□□ -0.36
SEMA4D-201ENST00000339861 SALL3Q9BXA9 1300 aa12.8□□□□□ -0.36
SEMA4D-201ENST00000339861 A0A0G2JLW4 131 aa12.79□□□□□ -0.36
SEMA4D-201ENST00000339861 CBFA2T2O43439 604 aa12.79□□□□□ -0.36
SEMA4D-201ENST00000339861 GSDMDP57764 484 aa12.79□□□□□ -0.36
SEMA4D-201ENST00000339861 GOLGA8FQ08AF8 430 aa12.79□□□□□ -0.36
SEMA4D-201ENST00000339861 GOLGA8DPQ0D2H9 430 aa12.79□□□□□ -0.36
SEMA4D-201ENST00000339861 ANKRD20A12PQ8NF67 263 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms